gsnb (gsnb,LOC107595496,LOC107665029,LOC107688626,LOC107731030,LOC107587666)


Basic Information

Item Value
gene id gsnb
gene name gsnb,LOC107595496,LOC107665029,LOC107688626,LOC107731030,LOC107587666
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 21075170 ~ 21081018 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239213.1
ACTAATAAGAGGAGGGGTTTCGTATGCAAACGAGACAAACCTGTTGAAGATTACTCCCAGTACCTGCGGAAGCTCAGCGCTCAAATCTACATCTGTCGTGCCAGACGCATCTTCTGAtaataccttttaaaaaaagctttaccCAACAGACAGCACCATGGTGAACCACCCTGAATTTGAGAAGGCAGGAAAGCAGCCAGGCCTGCAGGTGTGGAGGATTGAGAACATGGATTTGGTGCCTGTCCCTAAGAATCTTCATGGTGGCTTCTACACGGGTGATACTTACCTAATCCTCAACACCATAAAGCAAAACTCTGGAAATGTACAATATGACCTTCACTTCTGGATAGGTGATGCGTGCTCGGTGGATGAGAGCGGGGCAGCTGCTATCTTCACCGTCCAAATGGATGATTTCCTTGGAGGAAAACCCATCCAGTACAGAGAAGTACAGGGATACGAGTCAAAAACCTTTGTAGGCTACTTCAAATCAGGCCTTAAATACATGCAAGGTGGAGTTGCCTCCGGATTCAAACATGTAGCTTCTGGTGAAGTCAATGTGATGCGAGTTCTCCATGTGAGTGGTAGACGTGTGGTCCGAGCCACTGAGGTACCTGTGAGTTGGGACAGCTTCAACCAGGGTGATTGCTTCATCCTAGACTTTGAACAGGAGATATACCAGTGGTGTGGGTCCAAGTGCAACCAATTTGAGAGACTGAAGGCCACCAGTGTTTCTAAAGACATTCGTGATAATGAACGATGTGGGAGAGCAAAACTTTTTGTATGTGAAGAAGGGTCAGAAAATGAGAAGATACTAAAGattctTGGACCAAAGCCAGATCTTCCTGATGCACAGACTGAAGACACCAAGACTGATGCATCCAACAGAAAGTCTGCAAAACTGTACAAGGTGTCAAATGCCAGTGGGAGTATGTCTGTTACTTTGGTGGCTGAGGAAAACCCCTTTTCCCAGAGTGCACTGGAGTCCACTGACTGCTTCATCTTGGACCATGGTTCCAATGGCAAGATATTTGTCTGGAAAGGTAAAGAGGCTAATAAAGAAGAGAGGAGTGCAGGCATGAAAGCTGCTGAGGACTTCATCAGTAAAATGGGCTATCCCAAACAAACTGAGGTCCAGATCATCCCTGAGAATGGAGAGACTCCTCTCTTCAAACAATTCTTCAAGTTTTGGCGTGATACAGACCAGACAAAGGGAATGGGACAGGCTTATGTGCCTAACAAAATTGCCAAGATCAAGAAAGTGCCTTTTGATGCGTCATCTTTGCACAAATCAGACGCAATGGCTGCTCAGCATGGCATGGTAGATGATGGCAAGGGAGAGAAAAAGATCTGGCGCATTGAAGGATCAGATAAGAAACCAGTTGACCCATCCATTTATGGGCAGTTCTTTGGAGGAGACAGTTATATCATTCTCTACAGCTACAAGCATGGGGGACGTCAGGGacagataatatatatatgGCAGGGGGAAGAGTCCAGTCAAGATGAAAAAGGAGCTTCTGCCATTTTGGCTGCCGAGCTCGATTCCGAGCTGGGTGGGAGTCCTGTCCAGGTGCAAGTAATTGAAGGCAAAGAGCCTCCTCATCTTATGAGTATCTTTGGAGGGCAGCCAATGGTGGTGCACAAGGGTGGCACTTCACGAGATGGTGGCCAGTCAAAGGCTTCTGCACTCCGCCTTTTCCAAGTTCGTGCCAATCCTGCTGGGCACACACGAGCTGTTGAGGTTGATCCCGTAGCCTCCAGCCTCAATTCCAATGATGCTTTTGTTCTGGTGACTGCTTCAGGCTCTATGCTGTGGCTGGGACATGGTGCAAGTAGTGCAGAAAAAAATGGAGCCAAAAAGCTTGGCAACATTTTAGGAGTGGACCTTTCAGAGATATCAGAAGGAGCAGAGGGAGATGGTTTCTGGAGTGCTCTTGGAGGAAAAGCAGAGTATCGCACCTCTGAAAGGCTCAAGAGCAAAATGGACAGCCATCCTCCTAGGCTTTTTGCATGCTCTAACAAAACGGGACAATTCCTTATCGAAGAGGTGCCAGGAGAGATGATTCAAGAGGACCTGGCTCCAGATGATGTCATGATTCTAGACACATGGGATCAGGTTTTTGTTTGGATCGGAAATGAAGCTAATGAAGATGAAAAAAGTCAAGCTGTGACTTCAGCTGCCAAATATATTGAATCAGACCCTGCCAGCAGGGACAAGAGAACTCCCATTGTTACAGTAAAGCAGGGTTTTGAACCCCCCACCTTTACAGGATGGTTCCTGGGATGGGACCATGATTTCTGGAGTTCTAACCCATTGGAACGGGCCATGGCTGGTTTGACAATGTAATCTGAGGACTTGTAGTGCTGAAAGTTGTTTGTTTGATCATGTTTCAAGCTGACTCTCTAAACAATTAACGTTTCTCAACTCATTTACCAACCATTGTTTACCTCACTCATTCTTGTTTTACCTTCATATGGGAAAGTGAAAAATGTCCATGTTTACAAGACCTTAAAAGCATAGTACAAATTCTGTTTAttcaattcatcaaaataaacagaataacaaaataaagGCACATTATCTTACA

Function

symbol description
gsnb Predicted to enable actin filament binding activity and phosphatidylinositol-4,5-bisphosphate binding activity. Predicted to be involved in several processes, including actin filament severing; actin polymerization or depolymerization; and barbed-end actin filament capping. Predicted to act upstream of or within actin nucleation and cell projection organization. Predicted to be active in actin cytoskeleton; cytoplasm; and extracellular space. Is expressed in several structures, including epidermis; hatching gland; otic vesicle; periderm; and sensory system. Human ortholog(s) of this gene implicated in Finnish type amyloidosis. Orthologous to human GSN (gelsolin).

NR:

description
PREDICTED: gelsolin-like

GO:

id name namespace
GO:0003779 actin binding molecular_function

KEGG:

id description
K05768 GSN; gelsolin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239213.1 True 2588 mRNA 0.45 16 21075170 21081018

Neighbor

gene id symbol gene type direction distance location
c5 c5 coding upstream 28526 21031727 ~ 21046644 (+)
prdm12b prdm12,prdm12b,LOC107688643,LOC107665021,LOC107740838,LOC107731029,LOC108423597,LOC103042983 coding upstream 44233 21026850 ~ 21030937 (+)
surf4l surf4l,LOC107740812,LOC107688631,LOC107595501,LOC107665048,LOC100304967,LOC108423697,LOC103043297 coding upstream 94784 20973946 ~ 20980386 (+)
ciz1b LOC107740837,LOC107595499,LOC107665018,LOC107688644 coding upstream 101704 20967803 ~ 20973466 (+)
LOC122344887 cmlc1,LOC107095684,LOC103473836,LOC105934481,LOC102226792,LOC103150158,LOC103390188 coding upstream 282192 20792204 ~ 20792978 (+)
usp2b usp2b,usp2,LOC107665042,LOC107740817,LOC107731051,LOC107688622 coding downstream 40145 21121163 ~ 21151843 (+)
tlcd3a fam57a,LOC107740818,LOC107665040,LOC107731057,LOC107688621,LOC100712488,LOC103354813 coding downstream 77417 21158435 ~ 21174715 (+)
LOC122344667 fam57a,LOC107740818,LOC107665040,LOC107731057,LOC107688621,LOC100712488,LOC103354813 coding downstream 283205 21364223 ~ 21379200 (+)
LOC122344666 specc1,LOC107712164,LOC107665038,LOC107731042,LOC107688619,LOC107587672 coding downstream 300979 21381997 ~ 21421296 (+)
c5h11orf54 zgc:85789,c28h11orf54,LOC107709398,LOC107587676,LOC107690214,LOC107685814,LOC107712137 coding downstream 614517 21695535 ~ 21699273 (+)
LOC122345965 NA non-coding upstream 76082 20981027 ~ 20999088 (+)
G38209 NA non-coding upstream 124172 20946345 ~ 20950998 (+)
G38199 NA non-coding upstream 132057 20938833 ~ 20943113 (+)
G38118 ak5l,LOC107731024,LOC107740835,LOC107672580,LOC107665022,LOC107595531,LOC108423692 non-coding upstream 328290 20744558 ~ 20746880 (+)
G38132 NA non-coding upstream 376145 20698347 ~ 20699025 (+)
G38297 NA non-coding downstream 208913 21289931 ~ 21425456 (+)
G38302 NA non-coding downstream 408649 21489667 ~ 21549253 (+)
LOC122345943 NA non-coding downstream 415426 21496444 ~ 21497262 (+)
G38403 NA non-coding downstream 740460 21821478 ~ 21829684 (+)
G38430 NA non-coding downstream 786110 21867128 ~ 21867459 (+)
cntrl cntrl,LOC107740813,LOC107665016,LOC107688625,LOC107731033,LOC107587713 other upstream 5653 21046940 ~ 21069517 (+)
pappab pappab,LOC107665047,LOC107587665,LOC107667798,LOC107595518,LOC107731007,LOC107740823 other upstream 186899 20815421 ~ 20888271 (+)
G38094 olfm1a,LOC107672574,LOC107587661,LOC107552636 other upstream 512818 20558827 ~ 20562352 (+)
G38092 LOC107699781,LOC107552636,LOC107587661,LOC107672574 other upstream 561254 20185035 ~ 20513916 (+)
tecta tecta,LOC107665015,LOC107688634,LOC106603728 other downstream 3930 21084948 ~ 21120840 (+)
LOC122345215 specc1,LOC107712164,LOC107665038,LOC107731042,LOC107688619,LOC107587672 other downstream 99426 21180444 ~ 21260715 (+)
adora2b adora2b,LOC107712140,LOC107665025,LOC107595487,LOC107688642,LOC107731023,LOC107587731 other downstream 180536 21261554 ~ 21270874 (+)
G38318 aspa,LOC107665049,LOC107712162,LOC107595485,LOC107688617,LOC107587675,LOC107731059 other downstream 602261 21683279 ~ 21685619 (+)
znf541 LOC107712155,LOC107685724,LOC107595525,LOC107681879 other downstream 755331 21836349 ~ 21842194 (+)

Expression


Co-expression Network