plp1b (LOC107597234,LOC107680389,LOC107672433,LOC107592271)


Basic Information

Item Value
gene id plp1b
gene name LOC107597234,LOC107680389,LOC107672433,LOC107592271
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11324743 ~ 11330306 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239524.1
tgtttgtgagagagagcagaggGGTTTGTTTATTGTTCCAGGGACAAAAGCGTGAGTGAGAATCATAAAAGCATCGAAGGAGATTAAACTACACGGCACATCAGAGAGACAGAGCGTgatacgcacacacatactcacatgGCTGGCTCCGGTTTTGATTGGCTAAGACAGTTGCTACGACGCCTCAGAGGTGTGGATGAGAAGACCAGTAACCTCAGGAGACTCCAGGAGGTCACATCAGGTTGCTATGACTGCTGCATCCGCTGCCTGGGCGCCGTGCCCTACACCAGCCTGCTGGCCACCCTGCTCTGCTACACCGGTGTGGCGCTCTTCTGCGGGGGAGGGCATGAGgcgctcactcacacacgcacactcgtAGAGCTCTACTTCGCAAGGGACGTTCAGGACTTCATAGTGCTGGCAGACTTtATAAAATATTTCCAGTATGTGATCTACGGTCTGGCCTCCTTCTTTTTCCTCTATGGATTGTTGCTTTTGGCTGAAGGTTTTTACACCACCAGTGCAGTAAAGCAGACGTTTGGAGAATTCAGGAGCACCAAGTTTGGGCGCTGCCTCAGCctgactTTCATAATCCTGACATACGTGCTCGCCGTGATCTGGCTGGTTGTCTTTGGCTTCACAGCCATTCCCGTGCTCTTCTTCATTAATATGCAAAGCTCCTGTcacaaaatcaacattttgtcGGAAACCACCTTGTTCAACCAGCAAGCAAGGGTCTGCATGGACGCACGCATGTATGGGTTTCTTCCCTGGAATGCTGTGCCGGGGGTTGTTTGTGGAAATACACTGGCAAGCATCTGCAAAACACCAGAGTTCTATGTGACCTATGACCTTTACATCTGTGCATTTGCTGGAGCCGGAATCACTCTTCTTGCCCTGTTTGTTTATGTGGTTGCCACCACCTACAACTACGCTATTCTGAGGTTCCTCGGAAGGAAGGGACTCCGTTGCTAGGTTCGGTGTTGCTAGGCCCGCTTTCCTGTCGCCCGTGGCTGCAGTTTGAGTGATGTCATCACTGTGGCTGTTGAGGAAACGCAAAAGAGCTCCATGAAGCCCCTGCAGAGTTCTGTCATACACACAAACCACTGGTTTCATGAGACAAATTAGTACAAACTACACTAAGGTAGACTTACCAATGAAAATACAACAATTCATTGAGTCACTAAATGTAAAACCACAAACTACTGTACAGTGGATctctggaggagtggaatctagcttctgtatttcttcatttgtctcctctctctctctctctgtctttgctGCACACATTATTATATACTCTCATggccatttattcattttaatgattgtATTCATTGTGCTTTGTGGACTTATTAATTGCGGTTTGCCAGGATTTTAGCCTCTCttgtctctctttcacacattCCATCTTTTTAAGAGAGTTTGAGTGTGTTGTTTCCTCAGTCAGATGTGGGTGTTTTATTCTGTGTGACACACATGGAAAAACAGCGCTGTAGCGAGCAGCTTTCTTTGTGTCAATTTGAATTCAGTATTTACAGACATTCTTAGTGTCACCTTCTGTTTGATGATATGTTTGTGGGTGTACTTGTATATTTTTGACTAACTGTGGCAATATGCTGAACCTGATCAATGATGGTGCTCGATCCAAgaaactaatgtttttttttaaattgttcacTCACTAGCACACTTCCgtaaactgaaatgtatttctACAGTAAGATGGATAactgtaaatgattaataaaacatgcagaATTCTGACTAAAGTGTATTTACATAAACTGTGTGTTGACGTCATTGAAACTCatgcaataaaaagtaatttcctTTAATGAAA
>XM_043239525.1
GCCAGTTCGAAATGGGCAAATATTTAATGCAGTCGCATTAAGGattcatatgtatgtatgcattctctttttcttttggatAACAACTTTTCAGCCCTTTTCAGAGTCACATCTTCTGTTTGAACTGTAACAGCATATTGTCTGCTCAAAACAAGGTATTATCCAATCAAAAATCTTAACttaatctgtcatttttatactctcatgttgtttcaaacctgtatacgtttatttctttctgcaaaacacaaagaaaaactggTATCCAAAGGATATTGGACCACACTGAAATTCGTTACGCAggcgaataaaaaaaaatcatctgttttaacaaacataaaaatagatatcttcttttgtgttccacccATGAAAGTCCTAgagatttggaacaacacgagggtgagtaaatgatgacagcatgttcgtttttgagtaaatatccctttaataaaGTATGGAAGCTTGGAGAATGGATGGACCTGAAAGCATTTCCGTATTCTCAAACAGAAGATGAAAGTTAGGTTCAGGTTATGAAAGTGTATGTTTTACATAGCCGTCAGATTATTGTGAGCGACAGGCTTGTTGAGaagaaaacagtttaaaaagagTGTAAAAGACTGGTTGACCTGCCATGATCCCAATTGTAACCCCGGTGGTGTCagtatgtgtctgtctgtgccGCTATGAGTGGAAACGCAATGACGTACTCCACTGCTGAggcctgtgagtgtgtgtgtgtgtattttgtttgttcacaatgatagttgttgttgttaaaacaAAAGCCATTATGACTATCACAAGTGCTTCTTTTTCTGACCACAAAACCTCAAACACACATGAAAACGCACGCACCCCTCCCCCAAATCTCACCCTGACACCAGGCTactcaggagagagagagagagagagagcgagggagggaaagaaggagagaaagaagcGAGGGAGGGAGAGGAGCAGCTTAAGCGATGCATTTTTTCTTCCTTGAGGTGGACAGTGGAGTGtatctgaagaaagaaagagaaattaCTTCCTTCAGTTTAGACATCACTGCAGCAGAGGACAGAAATCTCTCTGGAGTGAGTGGACAAGCGTCTGCGCGGCTCTCTCCTGGCGTGGGTTCGACTCAGCAGTGTCGATGTTTCCAGTGAAACAGCCGTGGTTGTGTAAAGCGCTAGGTTGCTATGACTGCTGCATCCGCTGCCTGGGCGCCGTGCCCTACACCAGCCTGCTGGCCACCCTGCTCTGCTACACCGGTGTGGCGCTCTTCTGCGGGGGAGGGCATGAGgcgctcactcacacacgcacactcgtAGAGCTCTACTTCGCAAGGGACGTTCAGGACTTCATAGTGCTGGCAGACTTtATAAAATATTTCCAGTATGTGATCTACGGTCTGGCCTCCTTCTTTTTCCTCTATGGATTGTTGCTTTTGGCTGAAGGTTTTTACACCACCAGTGCAGTAAAGCAGACGTTTGGAGAATTCAGGAGCACCAAGTTTGGGCGCTGCCTCAGCctgactTTCATAATCCTGACATACGTGCTCGCCGTGATCTGGCTGGTTGTCTTTGGCTTCACAGCCATTCCCGTGCTCTTCTTCATTAATATGCAAAGCTCCTGTcacaaaatcaacattttgtcGGAAACCACCTTGTTCAACCAGCAAGCAAGGGTCTGCATGGACGCACGCATGTATGGGTTTCTTCCCTGGAATGCTGTGCCGGGGGTTGTTTGTGGAAATACACTGGCAAGCATCTGCAAAACACCAGAGTTCTATGTGACCTATGACCTTTACATCTGTGCATTTGCTGGAGCCGGAATCACTCTTCTTGCCCTGTTTGTTTATGTGGTTGCCACCACCTACAACTACGCTATTCTGAGGTTCCTCGGAAGGAAGGGACTCCGTTGCTAGGTTCGGTGTTGCTAGGCCCGCTTTCCTGTCGCCCGTGGCTGCAGTTTGAGTGATGTCATCACTGTGGCTGTTGAGGAAACGCAAAAGAGCTCCATGAAGCCCCTGCAGAGTTCTGTCATACACACAAACCACTGGTTTCATGAGACAAATTAGTACAAACTACACTAAGGTAGACTTACCAATGAAAATACAACAATTCATTGAGTCACTAAATGTAAAACCACAAACTACTGTACAGTGGATctctggaggagtggaatctagcttctgtatttcttcatttgtctcctctctctctctctctgtctttgctGCACACATTATTATATACTCTCATggccatttattcattttaatgattgtATTCATTGTGCTTTGTGGACTTATTAATTGCGGTTTGCCAGGATTTTAGCCTCTCttgtctctctttcacacattCCATCTTTTTAAGAGAGTTTGAGTGTGTTGTTTCCTCAGTCAGATGTGGGTGTTTTATTCTGTGTGACACACATGGAAAAACAGCGCTGTAGCGAGCAGCTTTCTTTGTGTCAATTTGAATTCAGTATTTACAGACATTCTTAGTGTCACCTTCTGTTTGATGATATGTTTGTGGGTGTACTTGTATATTTTTGACTAACTGTGGCAATATGCTGAACCTGATCAATGATGGTGCTCGATCCAAgaaactaatgtttttttttaaattgttcacTCACTAGCACACTTCCgtaaactgaaatgtatttctACAGTAAGATGGATAactgtaaatgattaataaaacatgcagaATTCTGACTAAAGTGTATTTACATAAACTGTGTGTTGACGTCATTGAAACTCatgcaataaaaagtaatttcctTTAATGAAA
>XM_043239527.1
ctgtgtgtgtgtgtgtttgtgagagagagcagaggGGTTTGTTTATTGTTCCAGGGACAAAAGCGTGAGTGAGAATCATAAAAGCATCGAAGGAGATTAAACTACACGGCACATCAGAGAGACAGAGCGTgatacgcacacacatactcacatgGGTTGCTATGACTGCTGCATCCGCTGCCTGGGCGCCGTGCCCTACACCAGCCTGCTGGCCACCCTGCTCTGCTACACCGGTGTGGCGCTCTTCTGCGGGGGAGGGCATGAGgcgctcactcacacacgcacactcgtAGAGCTCTACTTCGCAAGGGACGTTCAGGACTTCATAGTGCTGGCAGACTTtATAAAATATTTCCAGTATGTGATCTACGGTCTGGCCTCCTTCTTTTTCCTCTATGGATTGTTGCTTTTGGCTGAAGGTTTTTACACCACCAGTGCAGTAAAGCAGACGTTTGGAGAATTCAGGAGCACCAAGTTTGGGCGCTGCCTCAGCctgactTTCATAATCCTGACATACGTGCTCGCCGTGATCTGGCTGGTTGTCTTTGGCTTCACAGCCATTCCCGTGCTCTTCTTCATTAATATGCAAAGCTCCTGTcacaaaatcaacattttgtcGGAAACCACCTTGTTCAACCAGCAAGCAAGGGTCTGCATGGACGCACGCATGTATGGGTTTCTTCCCTGGAATGCTGTGCCGGGGGTTGTTTGTGGAAATACACTGGCAAGCATCTGCAAAACACCAGAGTTCTATGTGACCTATGACCTTTACATCTGTGCATTTGCTGGAGCCGGAATCACTCTTCTTGCCCTGTTTGTTTATGTGGTTGCCACCACCTACAACTACGCTATTCTGAGGTTCCTCGGAAGGAAGGGACTCCGTTGCTAGGTTCGGTGTTGCTAGGCCCGCTTTCCTGTCGCCCGTGGCTGCAGTTTGAGTGATGTCATCACTGTGGCTGTTGAGGAAACGCAAAAGAGCTCCATGAAGCCCCTGCAGAGTTCTGTCATACACACAAACCACTGGTTTCATGAGACAAATTAGTACAAACTACACTAAGGTAGACTTACCAATGAAAATACAACAATTCATTGAGTCACTAAATGTAAAACCACAAACTACTGTACAGTGGATctctggaggagtggaatctagcttctgtatttcttcatttgtctcctctctctctctctctgtctttgctGCACACATTATTATATACTCTCATggccatttattcattttaatgattgtATTCATTGTGCTTTGTGGACTTATTAATTGCGGTTTGCCAGGATTTTAGCCTCTCttgtctctctttcacacattCCATCTTTTTAAGAGAGTTTGAGTGTGTTGTTTCCTCAGTCAGATGTGGGTGTTTTATTCTGTGTGACACACATGGAAAAACAGCGCTGTAGCGAGCAGCTTTCTTTGTGTCAATTTGAATTCAGTATTTACAGACATTCTTAGTGTCACCTTCTGTTTGATGATATGTTTGTGGGTGTACTTGTATATTTTTGACTAACTGTGGCAATATGCTGAACCTGATCAATGATGGTGCTCGATCCAAgaaactaatgtttttttttaaattgttcacTCACTAGCACACTTCCgtaaactgaaatgtatttctACAGTAAGATGGATAactgtaaatgattaataaaacatgcagaATTCTGACTAAAGTGTATTTACATAAACTGTGTGTTGACGTCATTGAAACTCatgcaataaaaagtaatttcctTTAATGAAA

Function

NR:

description
PREDICTED: myelin proteolipid protein-like isoform X1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239524.1 False 1849 mRNA 0.45 8 11324756 11330306
XM_043239525.1 True 2792 mRNA 0.43 7 11325339 11330306
XM_043239527.1 False 1763 mRNA 0.44 7 11324743 11330306

Neighbor

gene id symbol gene type direction distance location
nlgn3b nlgn3b,LOC107672382,LOC107680388,LOC107733224,LOC107597232,LOC103045798 coding upstream 1880 11304365 ~ 11322863 (+)
cchcr1 LOC107680404,LOC107732622,LOC107747821,LOC107687693,LOC107592355 coding upstream 65263 11250625 ~ 11259480 (+)
stag2a stag2a,LOC107680370,LOC107732619,LOC107597229,LOC107687653,LOC107592356 coding upstream 75579 11233407 ~ 11249164 (+)
acsl4b acsl4b,LOC107747809,LOC107687654,LOC107597230,LOC107732603,LOC107680372,LOC107592357 coding upstream 91749 11223954 ~ 11232994 (+)
cwc15 cwc15,LOC107597228,LOC107592276,LOC107732607,LOC107747811 coding upstream 101923 11218523 ~ 11222820 (+)
iqcd LOC107733227,LOC107672405,LOC107597236 coding downstream 31760 11362066 ~ 11364940 (+)
uprt uprt,LOC107733222,LOC107672530,LOC107680369,LOC107748634 coding downstream 70143 11400449 ~ 11403283 (+)
si:dkey-237j10.2 LOC107672540,LOC107756556,LOC107597242,LOC107748630,LOC107680403 coding downstream 137414 11467720 ~ 11471124 (+)
si:ch211-26b3.4 si:ch211-26b3.4,LOC107597246,LOC107756552,LOC107565423,LOC107741180,LOC107680385,LOC107672834 coding downstream 142806 11473112 ~ 11512262 (+)
apool apool,LOC107672608,LOC107756555 coding downstream 184103 11514409 ~ 11518903 (+)
G35274 kat5,LOC106563454,LOC107597226 non-coding upstream 115338 11204500 ~ 11209405 (+)
G35267 NA non-coding upstream 137049 11187254 ~ 11187694 (+)
G35229 NA non-coding upstream 305551 10945056 ~ 11019192 (+)
G35202 NA non-coding upstream 486376 10838012 ~ 10838367 (+)
G35197 NA non-coding upstream 508442 10813457 ~ 10816301 (+)
G35304 prps1a,LOC103031347,LOC107733231,LOC107597240,LOC107672505 non-coding downstream 52364 11382670 ~ 11387170 (+)
G35309 NA non-coding downstream 75222 11405528 ~ 11405761 (+)
G35311 NA non-coding downstream 83735 11414041 ~ 11414688 (+)
G35322 NA non-coding downstream 111233 11441539 ~ 11442411 (+)
G35316 NA non-coding downstream 133563 11463869 ~ 11465339 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other upstream 21312 11266642 ~ 11303431 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other upstream 174518 11136223 ~ 11150225 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other upstream 260297 11046479 ~ 11064446 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other upstream 390990 10926823 ~ 10933753 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other upstream 588684 10717531 ~ 10736059 (+)
glra4b glra4b,LOC107741187,LOC107565418,LOC107680382,LOC108442052,LOC108259905 other downstream 308210 11638516 ~ 11652683 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other downstream 593922 11924228 ~ 11943110 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other downstream 918832 12249138 ~ 12255672 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other downstream 1183707 12514013 ~ 12528790 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other downstream 1373046 12703352 ~ 12705245 (+)

Expression


Co-expression Network