uprt (uprt,LOC107733222,LOC107672530,LOC107680369,LOC107748634)


Basic Information

Item Value
gene id uprt
gene name uprt,LOC107733222,LOC107672530,LOC107680369,LOC107748634
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11400449 ~ 11403283 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239808.1
GGTTGTTGTTCCCCGGGAGCGTGCGTCATGTATCATGCTCTCCACCGCTCAACATGGCGAGAAGATAGTGGTACAGATTCACATCATCCGCGGAACAGCCATCATTTAAGTGGACCAGGTGGTTTGGCgtagtgttttcttttttctttctttttattgtttgtcaTATGGAAACGGATCTCATCGAGAAGATGCCGTGCCATAACCAGCAGCTGAATAACAGCGAGAGCCCCGAACACGCCGCGAAGCACGTCCGCTTCGCCCGCAGCAGCCCCGCAGCCGAGACCTGTCAAGACGAGCCGTGCGAAAACCAAACCCCGAGCGACATCCAACGACAAATAGGACCTCAGCTGAAGCTCTTGCCGTTAAATGACCAAATACGAGAACTTCAGACAATCATTCGGGACAAAACTACCAGTAGAGGTGATTTTGTGTTCTGTGCTGATAGATTGATAAGATTAGTGGTGGAGGAGGGTCTCAATCAGCTTCCATACAGTGAATGCACTGTAACTACACCAACAGGACATAAGTATGAAGGTGTGAAGTTTGAAAAGGGAAACTGTGGGGTTAGCATTATGAGGAGTGGGGAGGCCATGGAGCAAGGCCTAAGAGACTGCTGCAGATCAATCCGTATCGGGAAGATTCTGATCCAGAGCGATGAAGAGACACAAAAGGCTAAAGTTTACTATGCAAAGTTCCCTCCTGACATTAGCCGAAGGAAGGTTCTGCTCATGTACCCTATACTTAGTACAGGCAACACTGTAATAGAAGCGGTGCGGGTGCTGAATGAACACGGCCTGCAGGCCAAACATATCATACTACTGAGTCTCTTCTCCACTCCACACGGTGCACGGTCCATTGTTCAGGAGTTTCCCGATATCACTATACTGACAACGGAAGTTCACGCAGTCGCTCCGACACACTTCGGCCAAAGGTATTTTGGCACAGACTGACAACCCACCAATAGCACACACGTTCACTTGGATTCACCTGAAGCTGCTTGTGCGTTTTGGTTTttgattcgtttttttttttatccacctGGTAAAGCCTGACCAGCCCACAGCAagtgtctctgtatgtgtgaTTGGTACATCGGGGCTGgcctctgtattttttttttggggttgttgttatatatttatcCATTCTTAATGTGAGCAAATGTATTATAATCTTTGAAATACACGTGCTCATCTATGACACCACCAGGATTGAAACGAACCGTTCCTAAACAGTgatgcaaaacagaaaaatacaaataaaatattttgtattaaataaactgta

Function

symbol description
uprt Predicted to enable GTP binding activity. Predicted to act upstream of or within nucleoside metabolic process. Predicted to be located in nucleus. Predicted to be active in cytosol. Orthologous to human UPRT (uracil phosphoribosyltransferase homolog).

NR:

description
PREDICTED: uracil phosphoribosyltransferase homolog isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239808.1 True 1290 mRNA 0.46 7 11400449 11403283

Neighbor

gene id symbol gene type direction distance location
iqcd LOC107733227,LOC107672405,LOC107597236 coding upstream 35509 11362066 ~ 11364940 (+)
plp1b LOC107597234,LOC107680389,LOC107672433,LOC107592271 coding upstream 70143 11324743 ~ 11330306 (+)
nlgn3b nlgn3b,LOC107672382,LOC107680388,LOC107733224,LOC107597232,LOC103045798 coding upstream 77586 11304365 ~ 11322863 (+)
cchcr1 LOC107680404,LOC107732622,LOC107747821,LOC107687693,LOC107592355 coding upstream 140969 11250625 ~ 11259480 (+)
stag2a stag2a,LOC107680370,LOC107732619,LOC107597229,LOC107687653,LOC107592356 coding upstream 151285 11233407 ~ 11249164 (+)
si:dkey-237j10.2 LOC107672540,LOC107756556,LOC107597242,LOC107748630,LOC107680403 coding downstream 64437 11467720 ~ 11471124 (+)
si:ch211-26b3.4 si:ch211-26b3.4,LOC107597246,LOC107756552,LOC107565423,LOC107741180,LOC107680385,LOC107672834 coding downstream 69829 11473112 ~ 11512262 (+)
apool apool,LOC107672608,LOC107756555 coding downstream 111126 11514409 ~ 11518903 (+)
zgc:113208 zgc:113208,LOC107672636,LOC107597249,LOC106567768 coding downstream 201544 11604827 ~ 11609386 (+)
nono LOC107741185,LOC107756548,LOC107680395,LOC107672625,LOC107565420,LOC107597250 coding downstream 206487 11609770 ~ 11614726 (+)
G35304 prps1a,LOC103031347,LOC107733231,LOC107597240,LOC107672505 non-coding upstream 13279 11382670 ~ 11387170 (+)
G35274 kat5,LOC106563454,LOC107597226 non-coding upstream 191044 11204500 ~ 11209405 (+)
G35267 NA non-coding upstream 212755 11187254 ~ 11187694 (+)
G35229 NA non-coding upstream 381257 10945056 ~ 11019192 (+)
G35202 NA non-coding upstream 562082 10838012 ~ 10838367 (+)
G35309 NA non-coding downstream 2245 11405528 ~ 11405761 (+)
G35311 NA non-coding downstream 10758 11414041 ~ 11414688 (+)
G35322 NA non-coding downstream 38256 11441539 ~ 11442411 (+)
G35316 NA non-coding downstream 60586 11463869 ~ 11465339 (+)
G35350 NA non-coding downstream 127235 11530518 ~ 11531244 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other upstream 97018 11266642 ~ 11303431 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other upstream 250224 11136223 ~ 11150225 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other upstream 336003 11046479 ~ 11064446 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other upstream 466696 10926823 ~ 10933753 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other upstream 664390 10717531 ~ 10736059 (+)
glra4b glra4b,LOC107741187,LOC107565418,LOC107680382,LOC108442052,LOC108259905 other downstream 235233 11638516 ~ 11652683 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other downstream 520945 11924228 ~ 11943110 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other downstream 845855 12249138 ~ 12255672 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other downstream 1110730 12514013 ~ 12528790 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other downstream 1300069 12703352 ~ 12705245 (+)

Expression


Co-expression Network