coro1cb (LOC107723343,LOC107597269,LOC107681860,LOC107587361,LOC107740952)


Basic Information

Item Value
gene id coro1cb
gene name LOC107723343,LOC107597269,LOC107681860,LOC107587361,LOC107740952
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7581530 ~ 7591624 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239855.1
CCAGAAGTAGTGTTTTACAAGAACCTGCCGATGCCTCACAGAAACCCAAAGCAACAAACTTCAGAAACGACCAAAGAAACCCAACTTTCCATACAGCGTTGCTTGGAAAAGAAGAGGCCGAATGGTGTGGAATTGAAGATTTTGATGCAGGTGACGCCGTGCAGACAGCTTCTTTGCAACGGGAAAAAGAGCCTCTCTATTTCACAGCTGTGATCTCACCACCGCTTCAGATTCATACATTTCCCGATCAGGAGGCGGGGAGTCATCTGACGTCTCTCATTTGTACGTTCCTCACGCTGAAATACAGAGCATGATCCCTGACATCCTACCCGCAGTTGCCCAGATggaaaaaaaggccaaaatcAAAGGACCACCACCACCTGTTCCAAAGAAACCAAAGAATCCCTTTAAAAAAGCCTCTGGCCGCAAGGAATCTGCTCCTCATTCCACAGACGAGCCAAGCAAATACTCTGACCTActgctcaaaaatattaaaatgggaAGAATGCAGGCAGCACTGCAGCCCGTTGAGGATTTTAACACGCATGTATCATGTCTTGATATGTCACCTTATTGTATGGAGTCCCCCTTCTACATGTGCATGTCCTTAGAGCCCGAGGCTGCTGATATTCCAAGATATTGTTTAGTCCCGTATGATGAAACTGTTGCACCTGACTGCGATGACTTGATAGAAACTGTCGATGATGAAGAACTAAAAGAAATGGATATGACACAGCTGAGGCCGTTGTTAAAAAGAAAGGCAAAAATGAAGGGCCCACCGCCACCTGTGCCGAAGAAGCCTCAAAATCCATTCGCTAACACAGACACCGAGAAGAACAAAGCAAGCAAAGACTCCGATCTGGAAAACGCGGAACTGACTTTGAAATCCGGTAGACGTGACTCTGAATGCTACCTGATGGACGTGGACGATGAAGACGACTCTAAACCAACCGCAGACCCAACTAGATATCCTCACGGTTCTTCAGATTCAGAGGAAAGCGAACTGTCCAGATACAGACCCGTCTCTGAGCTCATCAACAAAACCCAGGAGAAAGTGATACATCACAGCAGGACAAACGTAACGAAAGCCAGGCCAGATGTGACTGTGGGAAGCCAGAGCCTAAAAGTATCGCAGATGAAGACAGCCTTTGATGTACAAACATCTTCCCATAAGATGGAAAGAAGATCCTCGCCAAAGAAAGAAATGATCAGACGAGTGGTACGACAGAGCAAATTCCGTCATGTGTTTGGTCAGGCGGTGAAGAATGACCAGTGCTATGATGACATTAGGGTTTCGCGGGTTACCTGGGACAGTGCCTTTTGTGCAGTAAACCCCAAATTTGTTGCAATTATTGTGGAGGCTAGCGGGGGCGGAGCTTTCCTCGTTCTGCCTCTGCAAAAGACGGGTCGTATTGACAAGGCCTACCCCACTGTTTGTGGTCACACGGGCCCTGTGCTGGACATCGACTGGTGCCCGCACAATGATCACGTCATTGCCAGCGGCTCTGAAGATTGTACAGTAATGGTGTGGCAGATCCCTGAGAACGGCCTCACCGCACCTCTTTCTGAGCCAGTCGTGGTGTTAGAGGGTCATTCCAAGAGGGTGGGCATCGTGACGTGGCATCCAACAGCCCGCAATGTTCTGCTGAGTGCAGGATGCGATAATCTCATCATCATTTGGAACGTGGGCACAGGAGAAGCTCTGATCAACCTGGAGGACATGCATCCGGACGTGATCTTCAGCGTCTGCTGGAGTCGCAACGGCAGCCTCATTTGCACCGCGTGCAAGGATAAGAAAGTGCGCGTTATCGATCCACGCAAGGGAAAGATCACTGCGGAGAAGGATAAGGCCCATGAGGGGGCGCGACCCATGAGAGCCATCTTTCTGGCTGATGGAAACGTCTTCACCACCGGTTTCAGTCGTATGAGTGAACGGCAGCTAGCCTTATGGAATCCAAAAAACATGGAGGACCCGATATCGGTGCATGAAATGGACACCAGCAATGGAGTGTTGCTTCCATTCTATGACCCTGACACTAATGTGGTCTACCTGTGTGGAAAGGGTGACAGCAGTATTCGTTACTTCGAGATCACAGACGAGGCACCGTATGTGCACTACCTCAACACGTTTTCCAGCAAGGAGCCCCAAAGAGGCATGGGCTACATGCCTAAAAGAGGCCTAGATGTCAACAAGTGTGAGATAGCCAGGTTTTATAAACTTCACGAGAGAAAGTGTGAGCCAATTATCATGACCGTTCCTAGAAAGTCAGACCTCTTTCAGGATGACCTGTATCCGGATACAGCAGGTCCGGACCCAGCTCTCGAGGCAGAGGAGTGGTTTGAAGGCAAGAATGGCGAACCGATCCTGATCTCGCTCAAACACGGTTACGTTCCGGGCAAAAACCGCGACCTCAAAGTAGTCAAGAAAAATGTGCTGGATAACAAGGCGACCAAGAAGGTGGAGGAGCCGGCGACTCCCCAGAAACCTGCCTCTCCTCAGCTAACCAGAAAGAATGAAGTGAAGTTAGAGGAGCTGCTGCGAGAAGTCAAGTCCCTTAGAGATCTGGTCACGCTGCAGGACAGGAGAATCGCCAAACTGGAAGAGCAAGTGGCTAAAGTGGCAATCTAAGACACTGGTGGTGGTCTGAGCCATAGCGTCGGtatggagaaagagagatgcaGTTGGGCAGGGGGGGTCAGTCACTGCCAAAATTTCTCAATTTGACTCAATCATTCCGCTTGGTGTTTCTCACGAGGACAACTTCAAGCAACATTCCAAGATGGACTTTTACGTTTTTTGTCAAGTCTCCCCCCAAGCATTCGCATAGCAGAAGCAAAGTTGTGGCAATGAGTGGTCACTGGTTTTAActgatgttttacattttgttaaaatttttcTTACTTCTTTTGTTATTGTAACATTGTTTCCATGAGTATCCTAATATTAACCGGTATGTTACAGAGTGTCGTTGTATATACACATCAGtatttctctttccttttttttgttgtgctgCCAAATTTGAGGTGAATCGTCGCCTCTCcttttatttctacttttataTGTTTTTCCCAGTTGTAGATAGTGGCTTATTGAAAAACAAGACATGCTGTTCAAAAGTGGGACATCAGGCGGAACTGTGTGGATGTGATTGTAAAGGCAACTAATCGTAGATGATAAGGATGTGATTTAGTGAAACGTTCATAACCATTAAAATTCAGCATTTAGGATTCATCGGGATTTAATTGGAAAATCAGATGTCCCTTGTGGTGATCATGATAACTGGAGTATTAATTCATTTCCTCCATTGGCTGCTTTGAGATTATCACCATTGATTATAAAGCATCCAACAACAGggttttttcaaaatataatacagtataatacagtatatCCAAAAGCAATAACTTCATGTTGCACAATGAATGTGAACGTAAACCTAAACCTGTTAGACTTCGGCAAGTATCGTTGAAAATGCATTCCTCGTGCATATTCTTCATAAATCAAAAACCTACCGCTGTAACTTGAtagtaattatgaaattactGTTGCACCTCAGGAAATCAATCACTCTGAAGTCAGAAACATTGGATGCTCAACACTTGCCATTTGCATGAGGTTTTTGCCACAGAAATAATACCTTATTTTGATTAGGAAAAGGCtatttttttgctgtcattATCCATGTTCTCCAGTTTTACCCCGCTTTCGAATTATTCTCACGTTACATAATATTGGGCTGACACATGCTCTGATAAGTGAACTTGGCTTCAAGAGGCAGTGGCTACCTGCGAGCTCTTCTGATGtacatgtactgtaaatgtattgGTGCCTCTATGTGTGTTTCTGGTTTTAGACAGACCTCCTCAGTTGACCACTGCTGGAGGACAACATCCATGAAAATGAGCACTTATCTGTGTCCTAAACAGTCTTGTGCATGCATTCCAAActtcacctaaaataaaaaaggttggCTCTACAATAAATCTTTTCATTCATAA
>XM_043239856.1
GGAGGAGGGGAGGGGAGAGGAGAACAAGGGCGTTTTCTCCCGTTCATTCAGAATAAAGGAGAGGAGGGAAGCTATTGTGGCTAGCCGCAATTCACTGAGACAGTCACCAGCACAACTGAATCtgtgagaaaataaattaatgctttGAATTTGACGCTGTGGGAGACGTAGTACTGATAAAGAAATGATCAGACGAGTGGTACGACAGAGCAAATTCCGTCATGTGTTTGGTCAGGCGGTGAAGAATGACCAGTGCTATGATGACATTAGGGTTTCGCGGGTTACCTGGGACAGTGCCTTTTGTGCAGTAAACCCCAAATTTGTTGCAATTATTGTGGAGGCTAGCGGGGGCGGAGCTTTCCTCGTTCTGCCTCTGCAAAAGACGGGTCGTATTGACAAGGCCTACCCCACTGTTTGTGGTCACACGGGCCCTGTGCTGGACATCGACTGGTGCCCGCACAATGATCACGTCATTGCCAGCGGCTCTGAAGATTGTACAGTAATGGTGTGGCAGATCCCTGAGAACGGCCTCACCGCACCTCTTTCTGAGCCAGTCGTGGTGTTAGAGGGTCATTCCAAGAGGGTGGGCATCGTGACGTGGCATCCAACAGCCCGCAATGTTCTGCTGAGTGCAGGATGCGATAATCTCATCATCATTTGGAACGTGGGCACAGGAGAAGCTCTGATCAACCTGGAGGACATGCATCCGGACGTGATCTTCAGCGTCTGCTGGAGTCGCAACGGCAGCCTCATTTGCACCGCGTGCAAGGATAAGAAAGTGCGCGTTATCGATCCACGCAAGGGAAAGATCACTGCGGAGAAGGATAAGGCCCATGAGGGGGCGCGACCCATGAGAGCCATCTTTCTGGCTGATGGAAACGTCTTCACCACCGGTTTCAGTCGTATGAGTGAACGGCAGCTAGCCTTATGGAATCCAAAAAACATGGAGGACCCGATATCGGTGCATGAAATGGACACCAGCAATGGAGTGTTGCTTCCATTCTATGACCCTGACACTAATGTGGTCTACCTGTGTGGAAAGGGTGACAGCAGTATTCGTTACTTCGAGATCACAGACGAGGCACCGTATGTGCACTACCTCAACACGTTTTCCAGCAAGGAGCCCCAAAGAGGCATGGGCTACATGCCTAAAAGAGGCCTAGATGTCAACAAGTGTGAGATAGCCAGGTTTTATAAACTTCACGAGAGAAAGTGTGAGCCAATTATCATGACCGTTCCTAGAAAGTCAGACCTCTTTCAGGATGACCTGTATCCGGATACAGCAGGTCCGGACCCAGCTCTCGAGGCAGAGGAGTGGTTTGAAGGCAAGAATGGCGAACCGATCCTGATCTCGCTCAAACACGGTTACGTTCCGGGCAAAAACCGCGACCTCAAAGTAGTCAAGAAAAATGTGCTGGATAACAAGGCGACCAAGAAGGTGGAGGAGCCGGCGACTCCCCAGAAACCTGCCTCTCCTCAGCTAACCAGAAAGAATGAAGTGAAGTTAGAGGAGCTGCTGCGAGAAGTCAAGTCCCTTAGAGATCTGGTCACGCTGCAGGACAGGAGAATCGCCAAACTGGAAGAGCAAGTGGCTAAAGTGGCAATCTAAGACACTGGTGGTGGTCTGAGCCATAGCGTCGGtatggagaaagagagatgcaGTTGGGCAGGGGGGGTCAGTCACTGCCAAAATTTCTCAATTTGACTCAATCATTCCGCTTGGTGTTTCTCACGAGGACAACTTCAAGCAACATTCCAAGATGGACTTTTACGTTTTTTGTCAAGTCTCCCCCCAAGCATTCGCATAGCAGAAGCAAAGTTGTGGCAATGAGTGGTCACTGGTTTTAActgatgttttacattttgttaaaatttttcTTACTTCTTTTGTTATTGTAACATTGTTTCCATGAGTATCCTAATATTAACCGGTATGTTACAGAGTGTCGTTGTATATACACATCAGtatttctctttccttttttttgttgtgctgCCAAATTTGAGGTGAATCGTCGCCTCTCcttttatttctacttttataTGTTTTTCCCAGTTGTAGATAGTGGCTTATTGAAAAACAAGACATGCTGTTCAAAAGTGGGACATCAGGCGGAACTGTGTGGATGTGATTGTAAAGGCAACTAATCGTAGATGATAAGGATGTGATTTAGTGAAACGTTCATAACCATTAAAATTCAGCATTTAGGATTCATCGGGATTTAATTGGAAAATCAGATGTCCCTTGTGGTGATCATGATAACTGGAGTATTAATTCATTTCCTCCATTGGCTGCTTTGAGATTATCACCATTGATTATAAAGCATCCAACAACAGggttttttcaaaatataatacagtataatacagtatatCCAAAAGCAATAACTTCATGTTGCACAATGAATGTGAACGTAAACCTAAACCTGTTAGACTTCGGCAAGTATCGTTGAAAATGCATTCCTCGTGCATATTCTTCATAAATCAAAAACCTACCGCTGTAACTTGAtagtaattatgaaattactGTTGCACCTCAGGAAATCAATCACTCTGAAGTCAGAAACATTGGATGCTCAACACTTGCCATTTGCATGAGGTTTTTGCCACAGAAATAATACCTTATTTTGATTAGGAAAAGGCtatttttttgctgtcattATCCATGTTCTCCAGTTTTACCCCGCTTTCGAATTATTCTCACGTTACATAATATTGGGCTGACACATGCTCTGATAAGTGAACTTGGCTTCAAGAGGCAGTGGCTACCTGCGAGCTCTTCTGATGtacatgtactgtaaatgtattgGTGCCTCTATGTGTGTTTCTGGTTTTAGACAGACCTCCTCAGTTGACCACTGCTGGAGGACAACATCCATGAAAATGAGCACTTATCTGTGTCCTAAACAGTCTTGTGCATGCATTCCAAActtcacctaaaataaaaaaggttggCTCTACAATAAATCTTTTCATTCATAA

Function

NR:

description
PREDICTED: coronin-1C-like isoform X1

GO: NA

KEGG:

id description
K13886 CORO1B_1C_6; coronin-1B/1C/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239855.1 True 4002 mRNA 0.45 12 7581530 7591624
XM_043239856.1 False 2982 mRNA 0.45 11 7584435 7591624

Neighbor

gene id symbol gene type direction distance location
ssh1b LOC107597252,LOC107681862,LOC107723353,LOC107660766,LOC107740951 coding upstream 3318 7567773 ~ 7578212 (+)
arpc5lb arpc5lb,arpc5la,LOC107598357,LOC107681842,LOC107723334,LOC107740947,LOC107587390 coding upstream 70022 7505423 ~ 7511508 (+)
cabp7b cabp7b,cabp7,LOC107587385,LOC107681866,LOC108270594 coding upstream 79961 7494214 ~ 7501569 (+)
m17 LOC107681844,LOC107598316,LOC107723338,LOC107660776,LOC107740965,LOC107587449 coding upstream 107940 7471195 ~ 7473590 (+)
LOC122345181 ns:zf-e68,myhz1.2,myhz1.1,myhz2,myhc4,LOC107598006 coding upstream 211162 7360279 ~ 7370368 (+)
pkn3 LOC107681845,LOC107737478,LOC107587363,LOC107597294,LOC107712357,LOC107664395 coding downstream 7878 7599502 ~ 7613888 (+)
fam102ab fam102a,fam102ab,LOC107681850,LOC107748511,LOC107664417 coding downstream 51505 7643129 ~ 7672454 (+)
pip5kl1 pip5kl1,LOC107598405,LOC107681849,LOC107712381,LOC107587371,LOC107664401,LOC107748514 coding downstream 84435 7676059 ~ 7683284 (+)
sh3glb2b sh3glb2b,LOC107748508,LOC107681863,LOC107664415,LOC107597332 coding downstream 92108 7683732 ~ 7703171 (+)
LOC122344894 cyb5d2,LOC107664515,LOC107712371,LOC107597422,LOC107664398 coding downstream 383459 7975083 ~ 7976638 (+)
G33899 NA non-coding upstream 92567 7447776 ~ 7488963 (+)
G33903 LOC107723325,LOC107598017,LOC107740964,LOC107587450,LOC107681865,LOC107660777 non-coding upstream 98543 7464371 ~ 7482987 (+)
G33888 NA non-coding upstream 247752 7333469 ~ 7333778 (+)
G33887 NA non-coding upstream 251911 7329347 ~ 7329619 (+)
LOC122344649 NA non-coding upstream 340820 7222397 ~ 7240710 (+)
G34064 NA non-coding downstream 48752 7640376 ~ 7640732 (+)
G34071 NA non-coding downstream 118679 7710303 ~ 7711178 (+)
LOC122345618 NA non-coding downstream 121990 7713614 ~ 7725823 (+)
G34075 LOC107664520,LOC107748505,LOC107597375,LOC107712354,LOC107664410 non-coding downstream 126349 7717973 ~ 7780924 (+)
G34104 NA non-coding downstream 273543 7865167 ~ 7934699 (+)
svopb LOC107723362,LOC107681854,LOC107598053 other upstream 14267 7558940 ~ 7567263 (+)
G33891 myhz1.2,myhz2,myhz1.1,ns:zf-e68,myhc4,mmyhl1,myhb,mmyhl2,LOC107723326,LOC105016875,LOC105016873,LOC106565367,LOC107088603,LOC107384188,LOC107093413,LOC103461378,LOC108241321,LOC107083053,LOC107083052,LOC107378336,LOC106938339,LOC106596646,LOC106596400,LOC106585883,LOC106597527,LOC106594844,LOC108261437,LOC106595486,LOC106598139,LOC108261508,LOC103379498,LOC103379499,LOC108444093,LOC101482140,LOC107660779,LOC108443910,LOC108415768 other upstream 61289 7420140 ~ 7520241 (+)
LOC122345182 ns:zf-e68,myhz1.2,myhz1.1,myhz2,myhc4,LOC107598006,LOC103370545,LOC107723326 other upstream 132033 7373608 ~ 7449497 (+)
G33890 myhc4,myhz2,ns:zf-e68,myhz1.1,myhz1.2,LOC107723326,LOC107660779,LOC108415768 other upstream 135314 7425705 ~ 7446216 (+)
G33878 c9,LOC107691041 other upstream 237452 7338468 ~ 7344078 (+)
tmem119b LOC107681861,LOC107597286,LOC107587378,LOC107735096 other downstream 1339 7592963 ~ 7597520 (+)
dpm2 dpm2,LOC107664400,LOC107712384,LOC107681851,LOC107598396,LOC107587395 other downstream 81203 7672827 ~ 7674636 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other downstream 162450 7754074 ~ 7797968 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other downstream 409954 8001578 ~ 8010599 (+)
snx19a snx19a,LOC107597619,LOC107681657 other downstream 698096 8289720 ~ 8305446 (+)

Expression


Co-expression Network