cabp7b (cabp7b,cabp7,LOC107587385,LOC107681866,LOC108270594)


Basic Information

Item Value
gene id cabp7b
gene name cabp7b,cabp7,LOC107587385,LOC107681866,LOC108270594
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7494214 ~ 7501569 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239902.1
ACGATAAGGCCCGATGCGCCTCCATAAAAATAGGCTATGGAAATTTTAAACATGTATATCGTAGAACTTCTTCTTTAGCCGAGTTACCGGCAAACAACAAAAAGCTTTTGGAAAAATTGATAGAGTTTTGATTGAAAGCGGCTTTTGGTATGATGCTCGCGTCTGAGCGCGCGCGTGTAGTGTAGGCGAGTGACTTTGGCTGAAGATGCACGCATCAGGCGATCGCGCATTCGTGGATCAGACCTCGCCGAGGACGCAGCGGAGCACAGCTTTCTTGGATTTCTGATCAGCACCTCGAGCTCGCGTAAATCAATTAGCATCAGCGATTTCTAGTAAACGAACGCGTTATTTGTCGTTCTCTGACGGAGGATCTATGTTTATCGTGTGCTTTGTCGTTTACTTAAGAGCGAGCTACATTTTCTCCTATGTTCCTAATggacaaaaataactaaaatgttaGATATCTCGGTGAATGGAGTGCTCCAACATATTCTGATTTGTACAACTCGAGACCGTTCGACTACCTGTAGGATTGCATCAAGCGCGTGAGGGAGGCGGTGATGCCCAGGAGGTAATGCGCATTAGTATAATGTGACACAATTCGGGTTTTTTTGCACTCGAACGGAGGTTTCAGTGCAAATCGTGCACATCTGTACCCGGTGAATACAAGCTAATGGAACCACCGTAATCTCAAGGAGAGCCGACGGCACGTTGTTTTCGAACAGGCGTTGGGATGCTCTACGTTTATCCTTCAAACCCAATTGAAGATGTACAGAGCGCGAGGACATTTCCAGCAATATACGCGTACCTGTACCACACAAGCTCCGTCTGAATGGCAATACTTGAATGTTTGAAATCGTGAAATCATATTGCAATAGTTTTTGCACCTGATGCACGGCAATCCGCAATCGATCGAATGAATGGTCATTCCTGCGTTGAGTGTGCAGAGTGACTAATCGCACCTGGACCGAGATAAGACAGGATGGAGACGAATGCGTTTTGATTGCTGGCTTTGAGCTACCAGTAAGCGCTCTGTAGTAAAGTTGCAGTGGCCGAACTACAGGTGCTTTATGAAGATCAGAACACAATCGTTAGTTTGCCCTCGCAGAAATGCCAGTGCGCGCCGTGACTTCCAGGTTCATGTACAGGGGACTTTGCTCAATTCCAGATATCCTCTCCTACAGGACTCCCGTCAGCCTCCCCGAGGATGAAGTGGAGGAGATCCGTGAAGCCTTTAAGGTGTTTGACCGTGACGGGAACGGGTTCATCTCAAAACAGGAGCTAGGAGTGGCCATGCGGTCTCTTGGTTACATGCCAAATGAAGTGGAGCTGGAGGTGATCATTCAGAGGCTGGACATGGACGGAGACGGTCAGGTTGACTTTGAAGAGTTCGTAGCACTTCTCGGACCAAAACTGTCTTCAGCTGGTATGCCTGACAGATTCCATGGAGCCGAGTTTGACTCCATATTCTGGAAGTGTGACATACAAAAGCTGACTGTGGATGAGCTGAAGAGACTCCTGTACGACACCTTCTGTGACCATTTGACTATGAAAGACATCGAGAACATCATCATGACTGAGGAGAGTCACTTAAACAGCCCAGAGTGCCAAGTAGATATTGACACAAGTCCCATGCAACAAGTCAAGCACACCTGTGTGCGCAAGAGCTTGATTTGTGCCTTCGCCATTGCATTCATCATCAGCGTCATGCTCatcgcagccaatcagatgctTCGAAGAGGAATGAAATGAGCAGTTCTGTTTCTAAGACAATGAATGACTGACAAAAGGAAACAAggtaaacatgcaaaaaaaaaaaaaagcctactAATTTTACTAGTTTCTAACGACCACAGTTTTACAGAATCACCAAAGGCTGCACTTTCATTCTACTATAAACTCAAGGTAAAGACAGACTGTTGTTAGACAGACAAATTAAGCCCCCCAAAAAATAGTTTATCCTATATTAATGATCATTGTCctataaaatgttactttttttgccTTATGTTACAAAGTAGGTATCTATTAATGTAGCACATcatatttaaagtaaagtaTTGTGTTGTATAGCTGTAATTTACTTCATATCAACATCGTGTCAGGGTCGTTATGGAACTTGACACAATGAGATTTATAAAACTACTTCCCCATTTTGTCACAACGTGTGACTGGGTCACATACCTCACACAATTTTAGATCTGGCTGaagctaaattaattttaccaACACCATGCGAACACCGCCGGTTTGATCCGTGGGGATATTGAACAGCatttaaagaggaaataaaagaaatttcaACATGAGTAGCTAGGCTTAGATcggtttaaaaagaaaatgaatgtacTAGAAATCTACGAGTAATAAACTGTGACGGAAAATAGAGTATAAATTTGGTGACAATCCAAAGTGTTACTGAATCTAACCTGTGCAATCGTCTTTTGTTAACTTGCAAAAACAGTATTTCTTCCAGTCTTGACTCTCAGGATTGTTCGTCGACAGGTCTTTTATTAAATTGTCTGCTGGTTGTGTGAGGAAAAAGTATTGTGAAAAACTACCGAGTATTACAGGCTATTCGTATTGTGTGCCACGTGcgactaaatgttttttgtcgATATCTTGCAATATAACTGTTGTGAGTGTTAATACATATGATTACATATTTGCATGACGTGTTTCCTAGCATTTCGATAACATCAGTGTTGTCAATGAATAATcagtattatcattattttctttaagaACTTGTGGATCTCATTGTTCTAGGGTGTTGTGATCCATATAATGGTCATGACATTAACGTTCTGTCATcgtaaacaaatttgtgtccacATTATCCTGGTCAAGGTTAAAATTAGTAGTTAAGTTTGCTTTTAAGGcaactgtatgttttatttttttgttgttgtttttttacttgaaatatCTGTTACAAAATAATTCGACCAAACGGTCTGTTTCgttcaaattttaaaattttcgcCTCAAATGTTTGTTGTGGGTGTTGAGCGGTTGCGACTTTCCGCGCGAAATGGCGGATTGCTTTACGGCAGTATGCACGCATACCGCTTTCAAGCGAAAATTACGGCAGTGGATTCCGCTCACTTACCTACAGGGGGCTCCAAAGTTGCAAAAATACACCAAACTACATACAGTTGCTTTAGGTTTACGCGTTCATAGCTTAACTCAGAGGGAATTAACCAGTGCAAGTTAAtcaaaaagattattttaaagttgACTTAATAGCTTTAAGTTTGGTGCGAGTTACAAGTAACAAGCAATATTTGGCTTATGCATactctgaaataaatgtatgcatccAGCATCTATCTGTAATTTATGCATCTGTCAGTAATCTCAGTGCCTAAACAGTAAATTGGATGGTGTTGTTCTGTGTGTCTTAGGTTTGAAGTCCAAAGTCTATATTTTTGTGCACTTTCTCAGTATTCAATTCACGTGTTTGTGCTGTATCACAGATGACACTAAACTGATACATATTAAGTTGTCccttaacatttatttaacttaatttggTAAATCAATAACGTACGTTAAGTCTGTTGTGAAAGATTAATGTGACTTAATCTGGTTATTAAAATCAATCTGCAACTGCATATGATTGTAATGATAGTTGCATTTTATGAGGGTATAGAGCGAGATATCGATATACAACTTAAGACGTAATATTACTACATTACAGAAAGTTTGTAGTCAGCAAACTCGGACATTCTGACTTCACATCATGAAGGTAACGCTGACATGAAAAGACAACCTTTGCGCACAATAAGCAAAGACGAAAACCTGTTTCTTTGCAGTTGCATGCATTTGTAGTTTTCTGATGTTGTATTGTATGGTGTCAAGGGCAGCCTATGTTGTTAAAATATGCAATCTATGCTTATTTGATGACAATTTACTGTGATTTAAAGTTACaatgtatatatctatacatatacCAATTGAGATTTCAGGACATTAGAAACATATCACGCTGTCGATTTCCAAAGCTCAAGCATGTGATCTGCTGTGCAAATTGTTTTTACACACTAATAaggatattattatttaacacggcaatgtttttcttttcatccagaGTAATAAATGGGTAAAAGTCCTAGGATTAtatgaaaaatagttttatttttgtattttccaaatatttctttataagaATTCATCTTATTCCACGTGGAAATATTACAGCACATTTACTTAAATTACATCTATTACACCCAACTACATAATGGCTGATACACATTGGCAGTTACAAATTAGCTCACTTGATTATATTAATGTAGTGATGTATGAGTAATATATCGAACTAATGTATGTAACGTTATATTGCATCAATGTAGCCCTAGAAAACAACCTTGAATCTATGATGTGCCAACATGTGCTGATGTTACATTTAACTGTACCATGtgaacaaatgaattaaaacagtggtgcttcttctt

Function

symbol description
cabp7b Predicted to enable calcium ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in brain; dorsal thalamus; and tegmentum. Orthologous to human CABP7 (calcium binding protein 7).
cabp7 Predicted to enable calcium ion binding activity. Located in trans-Golgi network membrane.

NR:

description
PREDICTED: calcium-binding protein 7

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K23849 CABP7_8, CALN2_1; calcium-binding protein 7/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239902.1 True 4460 mRNA 0.39 5 7494214 7501569

Neighbor

gene id symbol gene type direction distance location
m17 LOC107681844,LOC107598316,LOC107723338,LOC107660776,LOC107740965,LOC107587449 coding upstream 20624 7471195 ~ 7473590 (+)
LOC122345181 ns:zf-e68,myhz1.2,myhz1.1,myhz2,myhc4,LOC107598006 coding upstream 123846 7360279 ~ 7370368 (+)
hspb15 hspb15,LOC107587387,LOC107740946,LOC107723340,LOC107691052,LOC107693867 coding upstream 134154 7355694 ~ 7360060 (+)
dab2 LOC107723357,LOC107597220,LOC107691042,LOC107693866,LOC107587364,LOC107740939 coding upstream 138979 7345990 ~ 7355235 (+)
gas1b LOC107691047,LOC107597997,LOC107723329,LOC107740940,LOC107693835,LOC107587379 coding upstream 157667 7334377 ~ 7336547 (+)
arpc5lb arpc5lb,arpc5la,LOC107598357,LOC107681842,LOC107723334,LOC107740947,LOC107587390 coding downstream 3854 7505423 ~ 7511508 (+)
ssh1b LOC107597252,LOC107681862,LOC107723353,LOC107660766,LOC107740951 coding downstream 66204 7567773 ~ 7578212 (+)
coro1cb LOC107723343,LOC107597269,LOC107681860,LOC107587361,LOC107740952 coding downstream 79961 7581530 ~ 7591624 (+)
pkn3 LOC107681845,LOC107737478,LOC107587363,LOC107597294,LOC107712357,LOC107664395 coding downstream 97933 7599502 ~ 7613888 (+)
fam102ab fam102a,fam102ab,LOC107681850,LOC107748511,LOC107664417 coding downstream 141560 7643129 ~ 7672454 (+)
G33899 NA non-coding upstream 5251 7447776 ~ 7488963 (+)
G33903 LOC107723325,LOC107598017,LOC107740964,LOC107587450,LOC107681865,LOC107660777 non-coding upstream 11227 7464371 ~ 7482987 (+)
G33888 NA non-coding upstream 160436 7333469 ~ 7333778 (+)
G33887 NA non-coding upstream 164595 7329347 ~ 7329619 (+)
LOC122344649 NA non-coding upstream 253504 7222397 ~ 7240710 (+)
G34064 NA non-coding downstream 138807 7640376 ~ 7640732 (+)
G34071 NA non-coding downstream 208734 7710303 ~ 7711178 (+)
LOC122345618 NA non-coding downstream 212045 7713614 ~ 7725823 (+)
G34075 LOC107664520,LOC107748505,LOC107597375,LOC107712354,LOC107664410 non-coding downstream 216404 7717973 ~ 7780924 (+)
G34104 NA non-coding downstream 363598 7865167 ~ 7934699 (+)
LOC122345182 ns:zf-e68,myhz1.2,myhz1.1,myhz2,myhc4,LOC107598006,LOC103370545,LOC107723326 other upstream 44717 7373608 ~ 7449497 (+)
G33890 myhc4,myhz2,ns:zf-e68,myhz1.1,myhz1.2,LOC107723326,LOC107660779,LOC108415768 other upstream 47998 7425705 ~ 7446216 (+)
G33878 c9,LOC107691041 other upstream 150136 7338468 ~ 7344078 (+)
gpr107 LOC107723348,LOC107691037,LOC107597176,LOC107693862,LOC107740935 other upstream 193485 7286568 ~ 7300729 (+)
kank1b kank1b,LOC107730999,LOC107691025,LOC107597012,LOC107587402 other upstream 505442 6978548 ~ 6988772 (+)
svopb LOC107723362,LOC107681854,LOC107598053 other downstream 57371 7558940 ~ 7567263 (+)
tmem119b LOC107681861,LOC107597286,LOC107587378,LOC107735096 other downstream 91394 7592963 ~ 7597520 (+)
dpm2 dpm2,LOC107664400,LOC107712384,LOC107681851,LOC107598396,LOC107587395 other downstream 171258 7672827 ~ 7674636 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other downstream 252505 7754074 ~ 7797968 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other downstream 500009 8001578 ~ 8010599 (+)

Expression


Co-expression Network