cfap251 (LOC107746856,LOC107681387,LOC107577995)


Basic Information

Item Value
gene id cfap251
gene name LOC107746856,LOC107681387,LOC107577995
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15555922 ~ 15563758 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239932.1
CCTCACACGTGACCGTATCTTAGCAACGGTACGCGTGGGTAATTAAACTGATAGGTAAAGAAAACTAGACATTAGCACTGGCAAGGTTTCAAATAGTATTGCGAGTGTGTTCGCGTATTAAAAACTTaaacgtattaaaaaaaaactttggcaTAGATTATGTTTTCAAATGCACAGAAACTAAATTAGCCTGGCTAACCAGCACGCGCAGAAGATCTGGTGTTTACATCTCTAACATCGTGACCCGGACAAATTCTCCGGGTTTTCCTCTCACGGGCCACACAGAATAATGTCAACGACAAACGACGGAACCGCAACTGGGGATGCAGGAGAGCAGAAACACGCAGAGGATAATCAgatagagaaaaaaatacacgaTGAAGATGAAGATAGGGAAGGCAGAAACGAAAAATACAGTCTGCAGGAGGAAGTTGCAGATTCACAAGTTTACGCAGCCACATCACTGTCTGTCATTCCCAAGGAGACCAGAACCAGAACACACCCACTGGTCCTTAACTGGGCTTATGGGATGAACCAAACTCTACCTGTTCTCAGCCTGCAGGATGAAGACAGACTGGTCATCTTGTATATTTGTGCCCATGTTGCTGTCATGTATGATCACACCTCCAATGCTCAGCATCTTTTACAAGGCCACTGTAGTCCAATCACCTGCTTGTGTGCTAGTGAAGACAGACGCTGGCTTGTTACAGCTGACACGGGCCAGGAGAGTCTAGTTATTATATGGGATGCTTATACTGGGATTCCTGTGCGGACGTTGTTTGACTGTCATCCAGAGGGTGGAGTTTCTGCAATGGCCCTATCAAAGGATTCAAGATACTTGGCAACTGTTGGAGCTGGTCCAGTACAGCGAGTATGTATTTGGAACTGGACAGATGAAAGAGAAAGCCCAGAATGCCAGGTTGACCTCAACCCAAAATATGGTTGCCAGAATCAACTACTTTTCAATCCCTTTGACAACACACAGCTGGTCAGCAACAGCAGCACTCAGACTCTCTTCTACACCTGGGAAACGGGACATCTGGAATGCTCAGCTCCTGAAATTACTGACAAGACCTTCAATATGGTGCTTGGTTCCCTGAGCCAGTCAATCTTCCATTATGATGGTGTGCAAGCTTTCACGGCCACCTCAGCTGGGAATATAGTTCTCTGGGACAAGCGGTCTCAAACTGTCTCTCGTCAACCAGCACTGAGGAAAGCCATAAAACTTGTGGCTCTCCAAAAGGAAGCAATCACTGTGCTGACTTTGATTGGCAGTTTTATAGTAACAGGTGACGTGAATGGCCACATCAAATTCTATGATGGAAATCTCAAGCTCTTCCACGTGTACAACGAATTCAGCTTGGATCCTATCAGATCCATCTCCTTTTCCAAAGAAAAACCCTCCATTAGCGACCTGGGATATATAAAGGACTGCACACTGGATGCTAAGCCATTTGTCATAAGAAATTTTGTTGTCTCCACCACTAATGCAACTGCAGTACATGTAAATGCACAGAAAAATGTTCCACAGACCCTTCTGAAGGAACATGCAGAACCTCTGGAAGCAGTTGCCTGCCATCCTAAACAGCCACTAGTGGCTATGGGCAGCCAAAGTGGCACCATTAAGGTTTGGGATTATGAACATAAAGAGGCAGTCTGCAGCAGGGTCTTCCAACCCCACAAACAGATCCAGTGTATTACCTACGATCCACAAGGTTTTTACCTGGCAGTGGGCTTTGCCAGTGGGGCTTTGCAGATTGTTGATGCCTGCACCCTTCAGAGTGATGGTAAAGAGTGTTTGCAGTACAGTCAGGACGGCATTACTCATCTCACCTTCTCCCAGGACTCGCGCTACCTGGCTGCCGCAgacACTGGAAAAGCTGTGACGTTGCTCTGTCGATGTAAAGAGGGGACTCAGGAGGTTTGGAAATACCAGGGCAGGCACCACTCGCATTATAAATCCATTCAGGACCTGCTGTTTGGAGTAGATTTAGACAGCAGTCAGCCTCGCCTCCTCTCTCTTGGCATGGATCGCAGGCTGGTGGAGTATGATCTGCAGAATAGTGGAGAAGATGGGTTGTTGATTTTGAGTTCTGAACGTATCGAGCAGAGTGCTGTGCCTACCTGCATGGTGTGGTATCCTCCTCTGACTCCTGAACACTTCCTCCTTACAGCTTCCAACCTGTATAAGATGAAGCTCTTCAATGCTACCTCCAAAATGTGCAGAAAAACAGTTTTGGGGCCATCTTATggttctccagtgaaaaagatGGCCATCTTACCTGCATCTAAGGATGGCGACCCTAATTCTCGGTACATGGCATATATAACACAAGATAAGGTTGGCATTCAGATTCTGCCTCTGGATGGAAACCCTCACAAGTCCTTTGCAATGATCTGTCACTCAACAGGCGTGTCAACTTTGGCTTGCTCATATGATGGTAGATATGCTTTTACCGCTGGAGGCCAAGACTGCACCGTCTTTTCATGGAAGCTCAATTTGTCATCACTGGAGGCATCAGCTGGTCTAGGAGGGAAAGACATGCTGCCCTTCTACAATCTTCTGGATGGAGGGAGAGATGGACAGCTCTTCAGGGAAATGGAGGAATATTTTTACTACTGTCAACTACAAAATCAGGACCTTGATACCATGGAAACACGGCTTGTATCCACACGCATACCTCTAACTGATGTGCCCTTCTTATTGAGAGCACTTGGCTTCTATCCAACAGAGCAAGAAcTGGAAGACATGCAAAATGAGGTGAAGTTCAGCCGCTATGCTGAGACCAGAAATTATGTGATGGACATCGATTTGGAGGAGTTCATTAAGCTGTACGTCAACCACAGACCTGCCTCTGGCATTGCCAGACAGGAGCTGTGCAATGCCTTCCAGGTGCTTGGAAAGCCAGGCGAAGAGGGCACATATACAATTGACAGAGACAAACTGCTGGAGTTACTGCAGGCTAGagGTGAACATATGACTGAGGATGACTTGGCTGAATGCTTTACAACTCTTGTAGGTATTAGTGGAGAGGGAGCTGGTTGCACAGAATCTCCATTCGAGAGTGTGCTGCCTCCTGAAATCAGCATGGAGACATTTGCCACAGATATCTTGGGGTTTTCTGCCGCCACCCAGGAACTTCCTCAAGAACACGGGCACAACCTACAACAAGCTTTGTGAAACTAATAATATATgca

Function

NR:

description
cilia- and flagella-associated protein 251

GO: NA

KEGG:

id description
K24228 WDR66, CFAP251; cilia- and flagella-associated protein 251

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239932.1 True 3198 mRNA 0.47 20 15555922 15563758

Neighbor

gene id symbol gene type direction distance location
LOC122344704 NA coding upstream 51316 15500502 ~ 15504606 (+)
LOC122345300 vcp,LOC107681079,LOC107708640,LOC103357444 coding upstream 84505 15463434 ~ 15471417 (+)
fancg fancg,LOC107552563,LOC107746873,LOC107602006,LOC107708626,LOC107681392 coding upstream 92967 15457352 ~ 15462955 (+)
pias2 LOC107681092,LOC107746809,LOC107676652 coding upstream 105400 15444366 ~ 15450522 (+)
arid3c arid3c,LOC107708619,LOC107681123,LOC107601998,LOC107746872,LOC103046366,LOC107552548 coding upstream 121053 15374137 ~ 15434869 (+)
bcl7a LOC107552594,LOC107746817,LOC107680981,LOC107708648,LOC107553587,LOC107676671 coding downstream 388 15564146 ~ 15568246 (+)
pigl pigl,LOC107746821,LOC107680910,LOC107552588,LOC107718344,LOC107676669,LOC107575753 coding downstream 121045 15684803 ~ 15705172 (+)
ubb ubb,UBC,LOC107553588 coding downstream 146221 15709979 ~ 15712715 (+)
p2rx5 LOC107680863,LOC107746824,LOC107552584,LOC107676654,LOC107718329,LOC107553591 coding downstream 154108 15717866 ~ 15726181 (+)
shpk shpk,LOC107680869,LOC107553593,LOC107718345,LOC107736096 coding downstream 164673 15728431 ~ 15732835 (+)
G36852 NA non-coding upstream 50169 15505174 ~ 15505753 (+)
G36847 NA non-coding upstream 60972 15494658 ~ 15494950 (+)
G36830 eef2l2,LOC108414462,LOC107708620,LOC107676651,LOC108255789,LOC107681082,LOC107746808,LOC107552597,LOC107601997,LOC107708638 non-coding upstream 78890 15454480 ~ 15477032 (+)
G36793 NA non-coding upstream 213058 15327099 ~ 15342864 (+)
G36765 NA non-coding upstream 255566 15295704 ~ 15300356 (+)
G36926 NA non-coding downstream 14360 15578118 ~ 15583662 (+)
G36918 LOC107746818,LOC107680961,LOC107552589 non-coding downstream 31690 15595448 ~ 15600161 (+)
G36937 LOC107680951,LOC107553567,LOC107746860,LOC107552540,LOC107718342,LOC107676644 non-coding downstream 58067 15621825 ~ 15623293 (+)
G36948 NA non-coding downstream 79537 15643295 ~ 15647107 (+)
G36984 NA non-coding downstream 149219 15712977 ~ 15713194 (+)
G36640 NA other upstream 835435 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 903011 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 1205931 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 1218157 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 1250618 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 828039 16391797 ~ 16395562 (+)
G37227 NA other downstream 910950 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 922862 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 1801091 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 1962266 17526024 ~ 17527444 (+)

Expression


Co-expression Network