LOC122345689


Basic Information

Item Value
gene id LOC122345689
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 18900511 ~ 18914080 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240092.1
GAAAGCGGGAGGGAGGGGGCTCCAGCTCGCGCCTGCAAACACGACTCCGTAACAGCCACGTAATATTCGTCCACGGGGGTTTacgggaataaaaaaaaatattacaatcgacagagttttaaaaaaaatcagGATGGCATTTCCTGTAGATATTCTGACAAAGGTGGATCATGAGACCTTAGAGCTAAAAGCCAAGGAATATATGTCTCAGCTCCCCTACAGAAATAAAGAGTACTTCAGCCTCTCTGATTCAAAACAGATAGAAATCGGACTCTGCAATGTGAGTTTTGTCCCTCTTTATGGAACagatactgaaaaaaaaatccttgctTTGTTCTCACCTGATGACTTTAACACAGTGTTAGGTCTATATTTGCTGGATCGGTGGTGGGGGGCTGAAGATGTTCTTAAAACAGTAGAGCCCTCAAAAACAGGCCTGATCGAGGTCAGCACTCTTGGGGAAAGAATAGTCTTATATGTTCTCAACAGAATTGTGTTGAGAAAGGAGAAGAGCAGTGAAGATGTTATCTTTCTCTGTCATTGTGAACACGAAGCTgcaaaaatactatggaaggaTGGAGAGGCAATTGGTTTTTACTCATTCAAACCCAAAGGTAGCTTATGCAGAAACTTCGTAACCCAATGCTATCAACTTCCTGTAATGGACACATTATTTGTCAGGAAGACTCACCGGGGCCAGGGTTATGCCATAAAGATACTGGAAGACTTTGTTGGTAGCTTCAGAAATGAGTACATAGGGTTGAAATTCCCTCTTACAAAAGCTATGTTTAAAGtttgtgaAAAGTATTTCAGTGTATATCCAGCAGACAAGGAGCTTCTGTGGGAAGTAGAGAACATAGGAAGCTCTTTCCAGAGAACTCTAATAGCTAACAGGCTACAGAAGCTGAAGCTAAAGgAGAAGGACCAGGTTGTGAGCCAACTGAATTTTGATGAAGAAGATGCCCCAGCTCCAATGGAAATTGAGTTTACAAAGATTCAGGAAACCACTGAATACACAGTGGAGATTGTGGAGAAGACCATCATAGACGTAACCAAAGTAGTAGATGACATACCTGTCACAACGCGTGGCAGAAGTAGCAACCTGAAACGAAGGGCTATCAGAGAAAATTCAGAAGAAAGGCTTTCAGAGAACATAATCAGGGTGGAAGACATTGAGGCCGGAGTTAAAAATTCAGACGAGGTAGAAGCAATGGAAAATCTTAACACTTTTTCTGCAAAAGAATCAGAAACGGTACTCAGGAGCTCAGTAGGCACAGTAACTGCaactatgagaaactttgcagAGTGTAGAAGATCACAAAAAAAGGAGACACGTGAAATTGAAAAAGACATTGTCACAGCTACATCAGAGGGGAGTGCAGTCACCCCTTTCACCACGGCTCGAGAAATAAAGTGCCAAAGCGGTAGTAAAGAGGAATGTGAAATGGTGATTAGGGAGTACACTATAGATATACAAGGAGCCACTATAGGGTCTATTGATCAAAACCAACCTGAGTCTGTGGTGGATGTAGAAAATGTGAAGATGAGTACAGGaactaaagaagaaaaaaatgaaacatttgaaaagaacAAAGAGCCTGATGAAGATACACATGTTTGTGAGTCTGAGACtgaggaaataaaacaaatgttagaTGAACTGAATGAGGAAAAAACTGTGAGTGAAACTGAAGTAGCAGAGCAGTCAGAGGCTCAGTCAAAGTGGGATGTGGAAAAAACAGGGAATAAAGAAAGGTCAGAAGATGAGGTTATGTTGGGAAGTGGGAAGGACCTAACTGAGGAAAGCAGAGATGACAAAACAGGCCAAGAAAAAAGTGAACCAAAGGAAGAAGACACAGTTCTGCAACAGTCTGTGGAAGTTAAAACGGTGACAAACAAGGATGCACTAATTGAAAAGGCAGAACAGGTCTTCAACAAGAGCAATTTGCCTCAGAAGAGAACATCAGATTTAACTCCCTCAAATAGGTCCAAAAGACTCAGACATCAGCCTGCTGAAAAAGATATTAAAGCTACGTCTGTGACAACAGGTCAACAAAGATCCAAACATCACAGCAAAACAATGATGCAAGATGAATATATTCAACCATCGACAGATGAAACCGAACATGATGTTATAGAAAAGATACAAGAAGCTcaaactgaaaataaagcaGAGTCTGAGGTTGAGGaatacacagaaaaagaaatgcttaCAGTTGAAACTGTAACTACCATGGACGTTGAAATTACACAGGTTGAGCAAACTGTATTTCCACAGTCATCTGTAGAGTCTCCTGAGATAcaggaaacaaaaacaacatctaAAGAGGGTGAGGAGACAGTGGAGAATAGCACTGTGACAATGAATGAAGTCAAAGTTGTGCTTGTGGATTTGCATGAATTTTCTCCTAAGGAGTCAGGTGATAATCAGGGAGAGATTGGTATTCTTGAACAAGAGGAAATGAAAGTTGATGCAAATCTCACGAGTGATGAAAATCCTGAGAGGGATGAACTTATTGCAGAGGATGTAATTTTACAGGAGAATGAAATGGCAAATACAAATGCTGATGAAACTACAAGTGTAGAATGTGGAAGTTCTGAACTACTTAGAGCTGCCATAAAAGATGATAAAGAGAAAGAACGTCAGATTACAAAGGTTACTGGAGAAATTCTGCTTATAGAAACAGGAGCTGAGGAAAATGTAGCAGGAAACAGAGTTGAAGACATTACAATAATGGAGAACAAGGAAGCAAATTTAGCTGGACAAATGGACCGTGACGTAGAGAGTTTTGCTCAGGAGGAACATGTCCAGGAAGAAGAAGTGCCAATCAGCACAGAAAGACATCTTAGACGTAGAACAATACCAATTCAGACTCCAATGATAAAGAAATCTAGATGtgtacagaaacaaaaaactgaACCAGATATTGAACATCAAGAAAGACACACAGTGGTGAGCAAGAATAAAACAGATACAATCTTGatgacaaaagagagagaggatgaaATAGATCAAGATGTCAACAAGTTGGAGAACAAAGAAGAACTTTTCACTAAGCCAGTGGAAGAACCAAACATGAGtagaaatgaatatgaaaaaacatCAGCAATAGCACAAGACACTGTGGATGTCTGTATACCAATTATGACAACTGAGACCAGTTTGGAAAGCCTTGAAGAAATGGTAAACACAAATACTGAGGAAACTGCTGTTTCACAGAGTTCCGAACTACCTTTGAGTGTAGAAATAAATGATCAGGAGAAAGAATTTCAGATTGTCGATCGTCCTGAAGAGAAGGTCTTGCTTATAGAACCTGTCAAGGAGGTAGAGAATGATAATGGTACTCCATTAATACAATTACAAAGAGCTACAGTAGTACTTGTGGATTTCAGCAAACTTTCCCAAAATACAGAAAGACAGGGTGAGGCTTCAGAAGAACTGAGACAATTCCAAATGGAAGAAAAATGGGAACTGTATGAACCAGATAAAAGTGAACAAGAACTGTCTAATCTCACActagaaaaagagaaacaagaaGAAGTACAAACACAGGAAGGCACTGAAAAGACCCCTGAGGAAGAGAAAACGGAGGAAGAAAACACAGTTGAAGAGCAAAACAAACTGGATAAACAAGACATAACATTTGAAGAGCAAAAGCCAACTGAAGATTTGGCCACAATAACTGCTGAGGTCAGCATGGAAAGCAATACAattgaaaacaaacagaatgaGGATGAAGGAGTGAGCAATCTTGTCCAGGAGAATGCTGTTCAAGAAAACTTAGAAGAGGAGGCATCAGTCAGCATGCAGCAAAGGCTTAGACAAAGAACAATAAGTCAGTCTCCACCAAGAAGAAAATCTAGACGTATACAAAAACAAAGGGAAGATAAAACTGAAACTGTCCTGATAACAGAAAAAGAAGTTGGTGAGGTGGACCAAAGTATAGAAGTAGTTGAGAAAGAGCCTCAAATATCAATTGTTCATGCTACTGAGAAGGTGATCCCACTCGTAGAATCATTGCCAGAAGATAATGAAGTAGAAAAAGGAGATAAAGAAATCAACAAGTTGGAGAACAAGGAGACACATTTACCTGTgacaagacagacagatgagGAGACACCTGAGGTTGAGGAAGCCAATTTAGAGCAACAGCAAAATGAGCTATTgggaaaaaatgacaaagaaacaGCTGAGACAGAAACATCCATGGAGTTTGCCTCAGTGTTTGGCAAAGAACAAACATATATTGTAGGGGGGACCATCATTCAAACAGAGGAAAAAGTTTCACTGGCAGAAGCAGAATTTCATGCGAAGGGTGAAAAAGATGATGGTACTTCAGTAATACACCTGCAGAAAGCCACAGTAGTACTTGTAGATTTAAACAAACTCTCCCAAATTACAGAAGGGGACAGTAACATTAAAGACGTTCTAACATCTTCCCAGACAGAGGAAAAACTGGATCAGGATGAACCAGATAATAGTGAATATCAACAAATTAATGTGACATCAGAAGAGAAAGAACAGTTAGAACAACTAGAAAAAGAGGAAGATACTGAAAAGACCCCTGAGAAGGACAAAATGGAGGATGAAAACACAGTTGAAGAACACAATGAACTCTATAAACAGGACATTACATTTGAGCAGCAAAAACCAACAGAAGATTTGGAagaacaaaatgatttaaagcagaAAGAGATCGTAGAAGGTTATAGGAgagaagatgaggatgagggAGAAGCAGCAAAATCTGGAGAACATcctgaaaaaataacaatggCAGATGAAACAAATATAATTCAGGAGACAGAAAAAGTTGACAATATTACTGAAAAGCAAACAGACAGTGACATAGACATGCATGATCTTGCTCAGGAAGCATCAGAAACTGACCACGAGGTCTTAGAAGAGGAGGCATCAGTCAGCACAGAGAGAAGTCTCAGAcgtaaaacagtaaaaattctGTCTCCACCTAGAAGAAAATCGAGACGTTTACAAAAGAAAGAGGCTGAAACATTTGaagataaaactaaaaacatgccAATAATAGGAAAAGTAGTTGAAGAAATGCAGAAAACAGCTGTAGAGGCTACTGAGGTCATCCCATCTGTCAAAGCAGTATCTGAAGATAATGtagtaaaaaaagaagaaatcaaCAAGATGGAGAACAAGGAAACAATTTTAGCTGTCACAAAAGACCCACATGAGGAGACACCTGAGGTGGAAGAAGCCAATTTAGAGCAACAGCAAAATGAGCTATTGggtaaaaatgacaaagaaacaGCTGAGACAGAAACATCCATGGATGTGGTTGACAAAGAGCGAATCGTAGGGGAAACCACCATCCAAACAGAAGAGAAAGTTTCACAGGTGGGAAGCATCGAAACCAATCAAAGTGACAATGAAAGGATCACAAGTCTCAAGCTCAGTGTGAAATCAGTCACCGCTACACAGAAGGCAAGAAAATCTCCACGTCTCCACAAAGTAGAGTTGGAGTCAGTGAAAGAGACAACTATGAGTAGAAATGAACATGAAGAAACCTCAGAAAAAACAGAAGAGACTGTCAACTTGTGTATGCCAGTAATTACAGTAGACAGCATATTGGATGAAAGTCTTGATGAAATGGCAAACACAAATGTTGAAAAAACTACAGCTATTGAAGCTGAGACTTTTGAACTGCTGATGGGTGAAGAAATAATTGATAAAGAGGAGGTTTCTCAGACTGTAGAAGAGGACAAAACTACAGAAGCGGAACCTCATGAAGAGACAGTGAAAGATGATAGTACTCCAGTAATACTGCAAACAGACCCACCTTTACTTGTAGATTTAAACAAACGTCCTCAAAATACAGAAGAACAGCCTGACACTCGAGAAGCCttaacacattttcacacagagGAACAACTGGAAATGTGTGAACCAGATGACATTGAATATCACCTATGTAACCTGACATCGGAAGGGGACAAACAAGACATGACAGTTGAGGGGCAAAAGCCAACAGAGGACATAAACGATggaaaggagagaaagacagtAGAGGAATATAAAGTGGTTATAGATGAGGATGTGGAAGAAAGTTTACCAACTGGAGACcatccaaaaacaacaacaatggaaGACAATCCAAATACAATTCAagatattcctttaaaagagaaacaaaaggaTAGTGACCTACAGATAAGCAGTCTTGGTCAGGAAGAATTTCAAGCTGTCAAGGAAATCTTAGAAGAGGAGGCATCAGTTAGCACTGAGAGAAGTCTTAGACGTAGAACAATAAAAATTCAGTCTACACCAGCAAAGAAATCTAGACGAGAACTAAGACAAGATGCTGGGGTTTTTGAAGATAAAACTGGAACAGTCCAACTACCAGGAGAAGGAGATGAAGAAGTACATAACGAAGGAGCAAAAATAGATAAAGAGGAAATACTTCAAAAAACCACTGTAGATGCTATTGAGAATATTGTCTCACTTATAGAACCTGATGAGAATGTAATAGAAAAAGGATTTGAAGAAATTAACAAGGAAACTACTCCTGAGATGGATAATGAGATAGAAACAGCTGAAACAGAAAACCCCATGGGAGTAGATGAAGTTTCAGTGGTTAACATGGAgcaaacatacattttagagAAGACCACCATTCAAGAAGAGAAAGAGATCTTGCAAATGGAAAGCTCTGAAACTAGTGAAAATAAGAGTGAAGGGGCCACAAGGAGAAGTCTAAGGATCAGTTCACAATCAGTCACATCTTCACAGAAGACCAGAAAATCTGCACGTCTCCATAAGGCAGAGTCGGAACTAGTAAATAAGAGTAGAAATGAAGAAACGTCTTCAATGACTGCAAAAATGGTAAATGTCTGTGTACCGATCACCATTGAGACCAATGTGGAAAATCTTGATGAAGATGGAGATGTGAGTACAAGGGTCAAAACTACTTTAGATGAGCAAGACATAGACATATCAAATGATGAAGCTTTGCCTGAAATATCTACAGATGTTGAGGAAGATGAGACTATgaccttatttaaaataactgaaaatgaaattcaGCTGGAAACAGATAAAATGCAGAAAGATATGGAGGAGGTccaggagaaagaaaaagcagagcCTTCACAAGAAAACACAGAGCAGGAACAAGAAGCGGTATCACTTAGGGAAAATGTGGGGGAAACCGACCTGACAAATGAATTTAAGACAGCAGCTGTGGAGGAAAAGGTTGCTTTAGAAAACTCAGAGCAAGAAGCAACTTTTATTACAAGAAGTCTCAGATATCGAACAGTAACAGTCCGGTCTACACCAagaagtaaattaaaatgtctcCACAGACAAGAGCTGGAGTTAGAAAGAGAAACTAGTGATTTAAATGTCCCTGTAAGGAAAGAGAATGAGGACAGAGcttctgaatttaaatatttggagGCAAAAGAGGAAGATAAAATTCAGACAATTACAGTTGGAAATTTAGAAAAATCAGAAACAAAAGATGATACTAaggaagaaggaaagaaagTCCTGTTTGAAATTGTGGAAAGTAACAGTGGCAGCCGGGTAAACTCAGAGATGAACAAAACTCAAGAAGATCATACTGAGAGAGAAGATATGCCAGTGCCTAATGAACAGGAGGAAGAGGTTTCCAGTGTACAGAAGGAAGAAACccaagaaagagaaaatgagggCACTGCTGAAGGTGGCCAAGGAAGTTCAGCTGATTTGGAGGAAACAGCAGCGGAAAGGAGATCCCTGAGAAAAAGAATGACTGTTGAAGCAGCTGCTCCAAGAAAATCCAAACGTCTTTGTAAACAAGAGCATGATGACGATTGTGAGAAGGTCAAGGAGGCCGTTATGGGACAAACTGACTCAGCAGAAGTGACATTTACACAAGACTGTGTAGAACTGAGGTCAGATGCAACTGCAGCCATTTTTGAGGAGAGTAATTTGGATGAAGAAATACTAcagaaaatccaaaaaaatgaacaaaaggcTAAATCAGACGGAGATTGTCATGTACATGAAGACACAGAGCCAGATGCAGGTGAATCTCAAGAGGAGCAAAAAGAGAGCAGATCAAATAAAACCCAGGCAGATGAGGACCAACAAGAGGTTTTGACTGGTGAAATAGTAGAGGAGGTGATAGAGCAACATGTAGATCTTGAGTCCAGTGCAAGTGAGGGATTCACCTTAGCATTGGAGGTAGAGGAAACTTCTGATCAAGAAGAAAACAATGCAGATGAGGCTTCAAAAGAGATATCCACATCTGCCGAAAAATATGAGAAAGGTGAAGAAAATATGGCTGATGACGATGAGAAAACTCTTGCCGTTGGAAAGCATGTTGTTCAAAGTAGCTCAACTACTGCTTCTACCAGACGAAAATCAGTTAGGCTACAAATGCATGAATCCAAAACTAAGGAAGATGAATCAGATTCTGAATCAGAAGTAGAACAAACAGCACAACAGAGACgtcagaggaaaagaaaagcCATTACTGATTCAGCATCAGTACGGAGATCAAGACGCTATGTTAGGGCAAGAATTGTGTAGAAGATTAGTGATTTGTGGCTCTTGTTTTAGTACAAGCCTTATATGCATTGCTTAAGAGACCAACCAGTTATATACATAATGTGAAGTTTTCTAttacatatgcaaaataatgcaaactaTTTTCACcgactatattttatatttttttattaaatatttgggATTTTATAAAACTGGTCTTTCTTGACATtagtaattactgaaataaGCATGTTCAGTATATTATATCTTTAGgcactttttttccttttatttctatattctgcattgcaaatgttttatagAAGTAGCTTTTATTGTATAGcactatttttatattcaattaaaGGAAAATGCATTCACTTTGGTTCCAGATGGGATGCTAAATCGATCTGATTTGTTCCTCATTTTCAGAGCACACAGATGCTCACACAGCATAGGTGTTATGTGTGAAACATATTCCCAATGTGCATTATGTGCTTCCTTTCaaatgttctttcttttgaatATTACAGTTACATTGTAGTATCTTAGTATCTTAAGTAGcaaatgtgtgtgaatgtgtaatGCTTATgggtttgttgtttattttacactCCATTCTGTTCACAGAGCACTTCATGTTGCTTCGTGTTTCATCACtgttgaaatgcaaaaaaaaaaaacatttttttctttgacctCTGTGATtagtctttaaaaacatttccctGAGCTgtaatttgtcagtttttttttttcttaaatgttttaataaa

Function

GO:

id name namespace
GO:0044428 obsolete nuclear part cellular_component
GO:0043596 nuclear replication fork cellular_component
GO:0070013 intracellular organelle lumen cellular_component
GO:0043601 nuclear replisome cellular_component
GO:0032993 protein-DNA complex cellular_component
GO:0005657 replication fork cellular_component
GO:0031974 membrane-enclosed lumen cellular_component
GO:0030894 replisome cellular_component
GO:0031981 nuclear lumen cellular_component
GO:0043233 organelle lumen cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240092.1 True 9282 mRNA 0.39 12 18900511 18914080

Neighbor

gene id symbol gene type direction distance location
gcnt4a LOC107699693,LOC107720226,LOC107587561,LOC107703224,LOC107555473,LOC107756273 coding upstream 9205 18890017 ~ 18891306 (+)
LOC122345996 NA coding upstream 10576 18885057 ~ 18889935 (+)
ankrd31 LOC107699692,LOC107587543,LOC107720237 coding upstream 15626 18879039 ~ 18884885 (+)
cert1a col4a3bpa,LOC107720288,LOC107587519,LOC107703248,LOC107555488 coding upstream 33070 18847936 ~ 18867441 (+)
nol6 nol6,LOC107699715,LOC107587545,LOC107579382 coding upstream 58059 18832815 ~ 18842452 (+)
pomt1 LOC107720285,LOC107699719,LOC107587516,LOC107756274,LOC107555474,LOC107703250 coding downstream 603 18914683 ~ 18921515 (+)
ubac1 ubac1,LOC107699722,LOC107587514,LOC107555477,LOC106579794 coding downstream 39297 18953377 ~ 18961721 (+)
rasgrf2b rasgrf2b,rasgrf2,LOC107720279,LOC107756301,LOC107703251,LOC108423655 coding downstream 101231 19015311 ~ 19068269 (+)
ckmt2b ckmt2,ckmt2b,LOC107720280 coding downstream 154825 19068905 ~ 19074630 (+)
tent2 LOC107720275,LOC107699727,LOC107587508,LOC107756276,LOC107703258 coding downstream 243779 19157859 ~ 19164155 (+)
G37540 NA non-coding upstream 150456 18678596 ~ 18750055 (+)
G37497 NA non-coding upstream 510445 18373499 ~ 18390066 (+)
G37501 NA non-coding upstream 512509 18386010 ~ 18388002 (+)
G37495 NA non-coding upstream 547046 18350686 ~ 18353465 (+)
G37492 NA non-coding upstream 620718 18279536 ~ 18279793 (+)
G37618 NA non-coding downstream 9222 18923302 ~ 18924676 (+)
G37619 NA non-coding downstream 11130 18925210 ~ 18925433 (+)
G37620 NA non-coding downstream 11357 18925437 ~ 18927002 (+)
G37734 NA non-coding downstream 373936 19288016 ~ 19288328 (+)
G37843 NA non-coding downstream 679990 19594070 ~ 19647075 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other upstream 52837 18842819 ~ 18847674 (+)
LOC122345691 NA other upstream 1373067 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 1527652 17364849 ~ 17372859 (+)
G37228 ncor2,LOC107742750 other upstream 2338770 16486620 ~ 16561741 (+)
G37227 NA other upstream 2339779 16474708 ~ 16560732 (+)
G37626 LOC107720210 other downstream 24733 18938813 ~ 18940895 (+)
msh3 msh3,LOC107720281 other downstream 48242 18962322 ~ 19014100 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 793208 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 1053497 19967577 ~ 20035380 (+)
lix1 lix1,LOC107552634,LOC107699708,LOC107587723,LOC107672536 other downstream 1229203 20143283 ~ 20151686 (+)

Expression


Co-expression Network