c5 (c5)


Basic Information

Item Value
gene id c5
gene name c5
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 21031727 ~ 21046644 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240153.1
TTGCTCAAACTAAACCTCAAGAAACGTTTTTGGGACTTATTTCAAGACAGTTGGGCTAATAAGTAACTCAAAGCAAGCAAAGCAGGTATTGATTTTCCGGACAAAAATTCCGGGCAAATGCCTGACCTGTTTTTTATGCAAGGAGCAACGATGGCGCGTTTATTTCTGCTCTGTATACTTCACCTCTTCTTCTGCGTTGGTGTCCAGGAGAGAGTctACCTAATCACCGCGCCTAAGCTGCTGCGACTCGACGCCTCGGAGAAGGTGCTGGTGCAGTTGTTCGGTTACGAGCAGGAGCTGACGGTGCATCTTTACCTCAAGAACACTTTGGCGCCGGATCATAAGGAGTATGCCTCTCAGTCGCTGAAGCTCAACGCCGCGAACAACTATCAAGCTTCGGCTAGTTTACGGATAATGCCCACGGATTTCCCTAAGGAGGACACGTATGTTTACCTTCAGGCGGTCTCCTCTGCTTTCTCTGCACATGAAAAAATCCCAGTCACTACTGTGAACGGTTTTCTCTTCATCCAGACTGACAAGCCGCTTTACACACCCGAACAACAGGTACAAGTGCGCGTTTACTCTCTCAACGAGGAGCTGAGGAAATCTGGACGAGCTGTCACCCTTACGTTCGTGGACCCTGATGGTATCAAAGTAGAGATGATTGATATGACAGACATCATTGGAGCAAAACCGCTTCTTCCACCGTTCAAAATACCTTTAAAACCAACTTTTGGGATCTGGAAGATCGTGGCTACTTACGCAGACTCCTTTGAAACGACAGCCACCGCTGAGTTTGAGGTCAAAGAATATGTGCTGCCCAGTATTTTTATCCACGTTGAGCCCAGAGACAGCTACGTCAGCAAGATGAACTTTGAGTCTTTCAGATTGAAGATTTCAGCAAAGTACGTTCATGGAACACCAGTTAGTTCTGCGGATATTTTCTTGACGTTCGGATACAGCACACCAGAAGAAACTGTCATGATACCAGAGACGTTTAAAAGATACATGCTGAACAATGGGCAGATAGAGGTCTTCTTAGACATCAAGTCAGCTTTATCTTCCATGCCTGACGGGCCTCAAAGTCTGAGTGccatgaaagaaaacagttttcTTCGGGTGAGAGTTTTGTTGCAAGAGTCAACAGGTGGCATCTCCCAGGAGGCGGTGATCTCAAATGTGAAATTTGTGGAAACTCCGTTTACAATGACTCTGATCTCAACCCCTCCTTTCATCAAACCGGGTCTACCATACTCCATGAGAGTCTTGGTGAAGGATCCTGTGGGTAAACCAGTGCAAGGTATGCCAGTCAAGACGAGGGCAACAGTAACCACAGCTGACGGCAGACCAGACACCCTTAAATTCCTGGGGCACCTGGATACACTGACAAGCACGAGTGGGAGGGATGGAATCGCTTACTTCACCTGTAATATACCCGCTAACGTCAAACGAGCTGAATTTACTTTTGAGATACAACATGCTTCTTGGAGTCAGGCTCCACTGAAACTAAAGGCTGAAGCATACGAGTCCGTCAACCATCGTTACCTGTACATCGATTTACCTGAATCCTCAGCGTTTGAAGTTGGACAGTACATTTATACCAACGTTTTCTTTGATTTCCGTGACTATCTTTCTCTAAAGACCTTCAGCTACcagGTCCTTTCCAGAGGAAAAGTTGTGcagtttaaaacagttaaatggGATGGTGAAAAGACTCAGAACATCAACATTAAGATCACCCCTGACATGGTGCCGTCTGCGCGGCTACTGGTGTACTACGTCCTGTACGGGGAGGAAAAAGCTGAGCTGGTGGCGGACTCCACGTGGATTGATGTGAAGGCTAAATGTGTTAACAATTTAAACgtGGACATAACAGTTCCCAACCATGTCTACAAACCCAAAGATAAAGTCGAATTAAGAGTGTCAACTCAAAGCATAGATTCGCTGGTGGCTTTCTCTGCTGTAGATACAGCCCTGTACAGCCTGAAATCTAATGAAAAAGACCCGCTAAAAAAGGTGCTACAATATGTTGAGCGAAGTGACTTGGGTTGTGGAAAAGGAGGAGGCAAAAATAATGCTGACGTGTTTGACCGAGTCGGCCTTATGTTCATCACCAATGCAAACGCCAAAACCTCTAGGACAGgaggCACTTGTTCTGACTTGGTTAGGCCGAAGCGTTCAGTTGACCTGGCGCACAAGTTTGAACAACACGccAAAAAGTATAAGGCGTTCAGGAATTGCTGCTCAGTTGGGACAGTGAGTAACCCGACGCTTGAATCCTGTGAGCAACGTTCACAGAGACTGACTTATCCTGCATATTTTGATGTGAATAGGAAGAAACTGTGTAAGCAGGCTTTCACTGAATGCTGCAACTTTGCTTTAAATCACCGGCAACAGAAAACGGATGAAATCATTCTAAGTCGCACAGCAGTGGACTTTCTGCTGGATGTGACACCATCTCAGATTAGGAGCTACTTCCCTGAGAGCTGGTTATGGGAAGAACACACCAGCAAGTCTGGGTCAGTAAGCATTACCAAAATTCTTCCAGACTCACTTACTACATGGGAGCTGAAAGCTGTTGGGGTGTTCAATGAAGGGATCTGTTTGTCAGAAGAAAAGATTCAGGTGTCCCAGGACATTAGTGTGGATGTGCCCTTGCCTTACTCCATGGTTCGTGGAGAACAAATTGAGCTTCGGGGTTCAGTATATAATCAGCGCCATTCAAGCACTCGGTTTAGTGTGACCCTGACAGCAacagagggagtgtgtgtgtttcgtggATCTCAACCTGGGAAACATGAAAAGCCACATGAAAACATAGAAGGTCGTTCGGTGGCCTTGGTCTCATTCTATATCATGGCCTTGGAAGCAGGCACTCATACGCTCACTTTcactttaaaaactgcatttggcACTGAGAGCGTGGTCAAGAAACTGAAAGTGGTGCCAGAGGGAATTAGAAAGGAAATACAAAGTGGTGGAAGAATAGATCCGAATGGAGTGTTTGGCACATCCATGCGGAAGCTTGAGTTAAAAAATGTGGTTCCTCCAAACATTGTGCCCAAGTCAACCGTGGATCGAATCCTGACCGTTCATGGTGAAGTACTGGGAGAGCTTCTGTCAATAATAAACAGCCCAGAAGGTTTAAAACAGTTGACTAACCTGCCACGGGGAAGTGCCGAGGTGGAGCTCATGGGTCTCCTGCCAATCTACTATGTCTACCACTACCTAGAAAAAACGGAGAAATGGGGCATTCTGGGGAAAGAAGCTGAAGCGAGTGAAAAGGAATTAATGAGGAAGATGCAAGCTGGCATCACCAGCATCATGTCATTTAAGTTGAAGAATGAATATGCCTTTAGTATGTGGTCAAACAAGGACAAATCCGCCAGCACCTGGGTGACGGCTCTCATGATCAAGACGCTTGCTGGCATGCATGAATGCCGCGTGCCTTTTGAGTCTAAAGTGCTTACCAACACCATTCACTGGCTAATTAAAAATTGTCAGAATAATGATGGCTCCTTCTCTGAAAAATCTAAAACTCTTCCACTCAAACTCATGGGTGCTGGAGCTGATGTCACTGAAAAGACAGTTTTCCTCACATCTTTTGTCATGATAGGaattaaaaatgctatgaaGGTCCCAGGTGTTAACTTACAGGTCTTTAAAAATGCTGTAGATCGCGGCGCACAGTACATCATCTCTAACTCAAAGAAGATTAAAAGTTTATATGCTAGAGCAATTGCGTCTTATGCACTGACACTTGCAGACATCCATAGTATGCCCGGAGTCAGTCtttatgaagaaataaaaaaacaggctCAAGTTGATGGGGAACCAGGCACAGTTCGTTTTTGGCAGGAGTCCAAACCAGACAAGGATTCGTTAAAACCCAGTGATGTGACAGCCAAGACCGTGGAAACTACTGTTTACGTCCTGCTGAATGCTTTAACCAGAGGTGAAGTCGCCTATGCAAAACCCATCCTGAACTGGTTAACACAAGACCAGAGATATGGAGGGGGCGTCCATTCCACACAGGACAGCATTCTCACTTTGGAGGCGATTACCAAGTACAGCATCTTAGCCAGTCAAGCTACATTAGACATGGTTGTTGACATCGAATACAAGACTAAAGGTGACATCAGCAGAATCAGACTAACTCAACAGAAGCCTGTGCATAAACCAATAGAGatgctaaAAAATGATGATATTATCCTCAAAACCGCAATGACCACCGGTGTGTCGTTTGCCACTCTGAGGACAGTGTACTATGCGATgacagaaaacaataaaaactgcCGCTTTGACTTATCAATCAACGTTTCTAGACATTTCCTGTATTCAGATGATCCTATGCTTTTGTCCCAGCGGATTGTGGCCTGTGCAAAATACAAGCCACCTCAAAATTCTGTTGAAACGGAGTCAGGATTGACTGTGATGGAAATTAATTTGCCCACCGGTGTGACCCCAATCCAGGAAGATCTAGACATGtaCCAGAATGGACTTGAGTCTCGGATATCAGACTATAAAATCACAGGTGACCAAGTCATCCTTCAGATAGATTCGATACCGTCAGAAAACTACTGTGTGGGTTTCCGTATTCAAGAGGAATTTAAAGTTGGCATGGCCAGTGCCTCAGTATTTAGAGTTTATGAATTTTATGCTCCAGAAGATCAGTGTATAAAGTTGTACCACAAACAAAGCCGCAGACTGTTACGACTCTGTGAGGGAGACCAGTGCCATTGCATGGCAGCGGAATGCTGCAACTTTAAATCCACCATTGATTCCACAATCACTGTGGAGCGGCTTAAAAAAGACATGTGCAAAGAAACCATGAAATACGCACTTAAAGTGATAGTTGAATCATCTGAGGCAGCAGGAGATTTTGTGACCTACAAAGCAAAAGTTGAAGCAGTGCTCAAAAAAGaacaaacaGACGACCTAAAAGCTGATTCAGAAATTGATTTGGTGACAAAGGAGGCTTGCAATTCAACAAATTTTGAAGTTGGCAAGCAGTATCTGATCATGACTGCTGAAAGTATTACGATAAAAGTGAATCATGATTATAAGTATAAGTTTCCTTTGGACTCACATGCTTGGGTCTACTGGTGGCCATTTGACTATGACTGCAGAGATGACTGCAAACAGTATGCTAGTGTTTTGGGggattttcaattttatttcttattttctggctgttaaaattaaataataaattgtacttttaatttgtaattcatATGCTCTTCTATTCCAAGGCAATATAATCGAAAAGAAATGGCATTTGAGAATAAGCAGgaacttttaaataaagctttttacctcaaaaa

Function

symbol description
c5 Predicted to enable endopeptidase inhibitor activity. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including complement component 5 deficiency; liver cirrhosis; neutropenia; paroxysmal nocturnal hemoglobinuria; and pneumonia. Orthologous to human C5 (complement C5).

NR:

description
complement C5

GO:

id name namespace
GO:0005615 extracellular space cellular_component
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG:

id description
K03994 C5; complement component 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240153.1 True 5327 mRNA 0.44 42 21031727 21046644

Neighbor

gene id symbol gene type direction distance location
prdm12b prdm12,prdm12b,LOC107688643,LOC107665021,LOC107740838,LOC107731029,LOC108423597,LOC103042983 coding upstream 790 21026850 ~ 21030937 (+)
surf4l surf4l,LOC107740812,LOC107688631,LOC107595501,LOC107665048,LOC100304967,LOC108423697,LOC103043297 coding upstream 51341 20973946 ~ 20980386 (+)
ciz1b LOC107740837,LOC107595499,LOC107665018,LOC107688644 coding upstream 58261 20967803 ~ 20973466 (+)
LOC122344887 cmlc1,LOC107095684,LOC103473836,LOC105934481,LOC102226792,LOC103150158,LOC103390188 coding upstream 238749 20792204 ~ 20792978 (+)
ak5l ak5l,LOC107731024,LOC107665022,LOC107740835,LOC107595531,LOC108255392,LOC108423692,LOC107672580 coding upstream 241105 20784861 ~ 20790622 (+)
gsnb gsnb,LOC107595496,LOC107665029,LOC107688626,LOC107731030,LOC107587666 coding downstream 28526 21075170 ~ 21081018 (+)
usp2b usp2b,usp2,LOC107665042,LOC107740817,LOC107731051,LOC107688622 coding downstream 74519 21121163 ~ 21151843 (+)
tlcd3a fam57a,LOC107740818,LOC107665040,LOC107731057,LOC107688621,LOC100712488,LOC103354813 coding downstream 111791 21158435 ~ 21174715 (+)
LOC122344667 fam57a,LOC107740818,LOC107665040,LOC107731057,LOC107688621,LOC100712488,LOC103354813 coding downstream 317579 21364223 ~ 21379200 (+)
LOC122344666 specc1,LOC107712164,LOC107665038,LOC107731042,LOC107688619,LOC107587672 coding downstream 335353 21381997 ~ 21421296 (+)
LOC122345965 NA non-coding upstream 32639 20981027 ~ 20999088 (+)
G38209 NA non-coding upstream 80729 20946345 ~ 20950998 (+)
G38199 NA non-coding upstream 88614 20938833 ~ 20943113 (+)
G38118 ak5l,LOC107731024,LOC107740835,LOC107672580,LOC107665022,LOC107595531,LOC108423692 non-coding upstream 284847 20744558 ~ 20746880 (+)
G38132 NA non-coding upstream 332702 20698347 ~ 20699025 (+)
G38297 NA non-coding downstream 243287 21289931 ~ 21425456 (+)
G38302 NA non-coding downstream 443023 21489667 ~ 21549253 (+)
LOC122345943 NA non-coding downstream 449800 21496444 ~ 21497262 (+)
G38403 NA non-coding downstream 774834 21821478 ~ 21829684 (+)
G38430 NA non-coding downstream 820484 21867128 ~ 21867459 (+)
pappab pappab,LOC107665047,LOC107587665,LOC107667798,LOC107595518,LOC107731007,LOC107740823 other upstream 143456 20815421 ~ 20888271 (+)
G38094 olfm1a,LOC107672574,LOC107587661,LOC107552636 other upstream 469375 20558827 ~ 20562352 (+)
G38092 LOC107699781,LOC107552636,LOC107587661,LOC107672574 other upstream 517811 20185035 ~ 20513916 (+)
cntrl cntrl,LOC107740813,LOC107665016,LOC107688625,LOC107731033,LOC107587713 other downstream 296 21046940 ~ 21069517 (+)
tecta tecta,LOC107665015,LOC107688634,LOC106603728 other downstream 38304 21084948 ~ 21120840 (+)
LOC122345215 specc1,LOC107712164,LOC107665038,LOC107731042,LOC107688619,LOC107587672 other downstream 133800 21180444 ~ 21260715 (+)
adora2b adora2b,LOC107712140,LOC107665025,LOC107595487,LOC107688642,LOC107731023,LOC107587731 other downstream 214910 21261554 ~ 21270874 (+)
G38318 aspa,LOC107665049,LOC107712162,LOC107595485,LOC107688617,LOC107587675,LOC107731059 other downstream 636635 21683279 ~ 21685619 (+)

Expression


Co-expression Network