polr3g (polr3g,LOC107669519,LOC107557435,LOC107756241)


Basic Information

Item Value
gene id polr3g
gene name polr3g,LOC107669519,LOC107557435,LOC107756241
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 17896074 ~ 17899622 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240159.1
CTCGTTTATATTCGTCCAAAAGCTGTAACAGAGCAAGCCCTTCCATCGCCAGGAAGTTTAAGGAATATTTGACTGACCAAAATGGCAGGAAAGGGCAGAGGAGTAGCAGCATTCACCTTCAACATAGAGTCCCTGGGTCTCACCAGAGGGTCCATGCCAGAAACTCAGAGAGGGCCATCTCCACTCTTCCCACAAATTGAATATAAACCAGGGCCTCTAAAAGCTGGAGAGGATGAAGACTATATGAGAGCTTTGAAACAAGAGATGAGAGGACGAATGAAAGACCTCCCATTTAACATAAAACCCCATGCAGGAAAGGGAGATGTGGAGAGGTACAAGGAGAAATACGCAAGAGAAATTAAAAGAATTGAAAATGACAACTGGACACCAGATTGGAACAATCTTCCGAAGGAGCTAAAGCCACAAAAAAAGATTGTTCGGAAGAAAAGGGatgctAAGAAAATGTCGAAGATCTCAAGTAAGGACAAGGAGGCAGTGCTGAATAAACTTGATgagctagAAAAGAAGGGAGATGCAAAATCTGATGAGGAGGAAGAAGCGGGGGGAGCGAAGAAAGAAGATGATGAGGAAGGGGAGGAAGTAGAAATTGAAGGAGAATTCGATGAAGAGCTTGAAGAGGAAAATGACTATATAGCAAACTACTTTGAAGACGGTGATGATTACGGGGGAGGAAGTGATGAGAACATGGATGAAGCCACTTAttagcaaaaacaaagaaaagtacttaattaaaaagaaaaaccatgATAAATCATGCACAAGAAGTAATGCATCAATGCACTATAAAAAGCACTTGATTTAGTTTGAT

Function

symbol description
polr3g Predicted to act upstream of or within transcription by RNA polymerase III. Predicted to be located in nucleus. Predicted to be part of RNA polymerase III complex. Orthologous to human POLR3G (RNA polymerase III subunit G).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240159.1 True 829 mRNA 0.41 8 17896074 17899622

Neighbor

gene id symbol gene type direction distance location
LOC122345176 LOC107720189,LOC107660966 coding upstream 302388 17591913 ~ 17593686 (+)
rasa1a rasa1,rasa1a,LOC107720192,LOC107553923,LOC107669512,LOC107753180,LOC108443998 coding upstream 309722 17554410 ~ 17586352 (+)
LOC122344741 otpb,LOC107720233,LOC107587559,LOC107699682,LOC107682870 coding upstream 519065 17374852 ~ 17377009 (+)
LOC122345919 camsap1,camsap1a,LOC107705949,LOC107675701,LOC107661566 coding upstream 521826 17373273 ~ 17374248 (+)
LOC122345236 sh2d3c,LOC107731039 coding upstream 567660 17319860 ~ 17328414 (+)
adgrv1 adgrv1,LOC107660972,LOC107669515 coding downstream 7786 17907408 ~ 18012794 (+)
nr2f1a nr2f1a,nr2f1,LOC107671052,LOC107567418,LOC107699709 coding downstream 462251 18361873 ~ 18369522 (+)
slf1 slf1,LOC107703243,LOC107756294 coding downstream 749143 18648765 ~ 18676675 (+)
fam81b fam81b,LOC107699714,LOC107703202,LOC107587521 coding downstream 906362 18805984 ~ 18814930 (+)
nol6 nol6,LOC107699715,LOC107587545,LOC107579382 coding downstream 933193 18832815 ~ 18842452 (+)
G37433 NA non-coding upstream 2801 17891951 ~ 17893273 (+)
LOC122345748 NA non-coding upstream 281078 17593868 ~ 17614996 (+)
G37331 LOC107720200,LOC107699749,LOC107756319,LOC107587493,LOC107703272,LOC107567144,LOC108423573 non-coding upstream 538315 17354606 ~ 17357759 (+)
G37333 NA non-coding upstream 542978 17351156 ~ 17353096 (+)
G37330 NA non-coding upstream 545152 17350591 ~ 17350922 (+)
G37449 NA non-coding downstream 119708 18019330 ~ 18019601 (+)
G37475 LOC107720216,LOC107575123,LOC107567414,LOC107756269,LOC107720179,LOC107699689 non-coding downstream 138510 18038132 ~ 18044946 (+)
LOC122345897 NA non-coding downstream 205477 18105099 ~ 18120648 (+)
G37490 NA non-coding downstream 297581 18197203 ~ 18197542 (+)
G37491 NA non-coding downstream 378957 18278579 ~ 18278805 (+)
LOC122345691 NA other upstream 368630 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 523215 17364849 ~ 17372859 (+)
G37228 ncor2,LOC107742750 other upstream 1334333 16486620 ~ 16561741 (+)
G37227 NA other upstream 1335342 16474708 ~ 16560732 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 1500512 16391797 ~ 16395562 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other downstream 943197 18842819 ~ 18847674 (+)
G37626 LOC107720210 other downstream 1039191 18938813 ~ 18940895 (+)
msh3 msh3,LOC107720281 other downstream 1062700 18962322 ~ 19014100 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 1807666 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 2067955 19967577 ~ 20035380 (+)

Expression


Co-expression Network