LOC122345824 (LOC107740804,LOC107665032)


Basic Information

Item Value
gene id LOC122345824
gene name LOC107740804,LOC107665032
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 20664933 ~ 20677943 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240305.1
TCGAGGTGGGACTAAGGAGCAGCAAGAGGATCGTTGTAACTGAGCTAAGAGACGTACAGACGTCATTCAAGCAACTTCTTTCCCTTAACTGAGCAGCATGTCAGTAGTCACATCCCCTGCCCAGGTGCCTCCACCTATTGTGAACCCTCCTCCTGAGGTCACGAACTCCAGTAAGCCTGGCGAAAAAACCAACCAGCTACAATATATGCAGAATGTGGTTGTGAAGACTCTATGGAAGCATCAGTTTGCGTGGCCCTTTTACACACCTGTGGATGCCATCAAGTTGAATCTGCCAGACTACCATAAAATTATCAAGAATCCAATGGACATGGGAACCATAAAGAAGCGCCTTGAGAATAATTACTATTGGACTGCTGGAGAGTGCATGCAGGATTTTAACACTATGTTCACAAACTGTTATATCTATAACAAGCCCACAGATGACATTGTTCTCATGGCTCAAGCCTTGGAAAAGATTTTCCTCCAAAAGGTAGCTCAGATGCCTCAGGAGGAGGTGGAACTTTTAACCCCACCACCGAAGGGCAAAGCACGGAAACCCGGAGCACCCCCGGCTTCAGAAAACCAACAATCAATAGCACTGACTACCGGTTCTCCATCCTCGTCGTGTCCGAGCTCCCCTCCTCAGCTGGCTCAGACTCCTGTAATAGCAGCGACTCCTGTCTCGACCATCACCTCCAATGTCCAAGCTGTGCCCCCCGCCGCGTCCATGATCCCAACTGCACAGCCCGTCGTCAAAAAGAAAGGGGTGAAGCGGAAAGCAGACACTACCACACCCACAACCTGCGCGATCACTGCCAGCAGAAGTGAGTCGCCCACTGCCATGCTGGAGTCTAAACACAGTAAAGTCATTTCCAGACGAGAGAGCACAGGCCGACCCATCAAACCTCCCAAAAAGGACCTGGAGGACGGGGACGTACAACAACAAGGCAACAAGAAAAGCAAGCTCAACGATCATCTCAAATACTGTGACACTATCCTTAAAGAGATGCTCTCCAAGAAACATGCGGCCTACGCCTGGCCCTTCTACAAGCCTGTAGATGCGGAGGCCCTCGAGCTGCACGATTATCACGAAATCATCAAGCAACCAATGGACCTCAGCACTGTCAAAaaaaagaTGGACGGTCGAGAATACCAAGACGCCCAAAGTTTCGCAGCAGATATTCGGTTAATGTTCTCAAATTGTTACAAATACAACCCGCCCGATCACCAGGTCGCTGCCATGGCAAGAAAACTCCAGGATGTGTTTGAGATGAAATTCGCCAAGATGCCCGATGAACCCGCGGAGCCGTCCTCTCCCAGCGCGGTGTCAGCCACGGCAGTGGTGAGCAAGAGCACGGGCAGCAGCGAGAGCAGCGCCGACTCTTCCAGCTCCAGCTCCGACTCGGAGGAGGAACGGGCCACTCGGCTGGCTGAGCTGCAGGAACAGCTGAAGGCTGTTCATGAACAGCTAGCCGCTCTGTCACAGGGTCCTGTGAGCaaaccaaagaaaaagaaagagaagaaagaaaaagagaagaagaaaaaagataaagagaaggacaaagacaaaaacaaggtCAAGGCGGAAGATGACAAAAAGGCCAAGTCCTCGCAACCGAATAAGCAAACTCAGCAGAAGAAGACCTCCGCACGGAAACCCAACAGCACGTCCACCACGAGGCAACCGAAAAAAGGGGGAAAACCTGGCTCTGCGAACTACGAGTCTGACGAGGAGGAGTCTCTTCCCATGTCTTATGACGAGAAACGGCAGCTCAGCCTGGATATCAACCGTTTGCCGGGTGAGAAACTGGGCCGCGTGGTCCACATCATCCAGTCGCGCGAGCCGTCGCTGCGAGACTccaacccggacgagatcgagATCGACTTCGAGACGCTCAAGCCTTCCACGTTGCGTGAGCTCGAACGATACGTCAAGTCTTGTTTACAGAAAAAGCAACGCAAACCTTTACCGGGCACTGGGAAAAAGAGTGCCAAGTCTAAAGAGGAACTGGTTcaggaaaagaagaaagagttAGAAAAGAGGCTACAGGACGTGAGCGGACAActgaacaacaacaagaaaCCACCCAAAAAAGAGAAGGCGGGGTCTGCGCAGGGGGGCGGGCCATCTCGGCTGAGTGGCAGCAGCAGCTCTTCGGATTCGGGCAGCAGCAGCTCCAGCGGCTCCAGCTCCGAGAGCAGTGACTCAGACTGAACTCCGCGTACTTCAACCTCCTCTATTTTCTAACGAGTAGTGTGTGTTGTCATGATAGTATCTCTCTGAAGGCCCCGTTTTATAAAGAGCTAGACGCATTGCAGATGGCAgaggatattttaaaatagttcgTAGGATGCTCTTGGCTCAGACAAAGAGGAGAGTTGGAATAGTTCAAGCAGTTTTAAGGTTCTCGCTGGCCCTCAAAGGGAAACGTCTGGTATcaccagaggaaaaaaaaagacaaaaaaaagatatttttttgaaaataagtcGGCTGTGGAGGTGaaacggttgtgtgtgtgtgtctgtttttttctcctttttttttttttttaggttgctGCTCGTTAGATCCATACTGAAAACACGCATTAGTGGAAAAACTGACAAATGCctggctgcattttttttactgatcgAGTAGCTACACAAGTCTGAAGGAACAAACAATGATATCGGCTCTCTCGCTCTGGTGTGGTTCTGTCATGTTGGCATGACACTTCAGCTCATTCCACGTTTCTTTTGCTGACTATGATAATACTCGTAATTGTTACCATTTTTAAGagaatctatttattttttttaatccaaaaaggCACAAGGCTGCGTGCGTTTTCAACGGAAATGTTTTCAGGTGACcagtttaaatgtaagaaattcGGCTCGACGTAACTCGCTAGTACTCTAGGCCGCATCTGGAAACTGTCAGTATCATTATTAAACCGTTTTCAGAGGCTTCGTAATCATTGCAACACTGTAAACTTTCTCTTCCGGTGCTGTCAGCTCAGTATTTGATGTAGAATTatgtctgaattttttttttttttgttttgtttgttcgcTTTTAATCTATATCATATGctcatttgttttctatttggaTTGTCTTcttcctacttttttttttttttactattcatTTGTAGGCTCCCTGAGTATCTAATTTCCTACTTTCTATCTGATATGCCTCATCTTTACTAAGTCCACTCATAGGACAATCAAAGTTGTGATTTAAGTTCAGTATATATGAAACGGGGTGTATTTATCATGAATGATGGCAAAAATACATTGAGAATTTCAAAAAAACGCCCGTAAGGCTGCAGATTGGAACGAATCGGCCTCCACGAAACTCCAAACTAAGTGAATACTAGAATAATAGCCACTTAATAGGAGATCTCCGTAAAGAAAAGACAAGATTTCAAGCAGCTGTGCTAGATGTCATTTCAGAAGGATACGTGTTTGAcaatagttatttttagttgaaaGTATTACAACTAATGTACGTTCtcaattttaataactttattttactttagttttttctcCGAATGGTGTATCGAATGCTTTCAATGGTACCTAGACACTTCTTGCCATGTATCCAGAATAGTTTGGAAATGGACCATGACTGAtaatctttataaaaaaaaaaatatgaatgtattagtttttttttttttcttcttcttcttgtggCTGCAGTAATGCCACTCATACTGGGTTTGTTGCATTGGCGAGGATTTCTTTAACAGCCTTGAATTCAAGCCTGAACCCCCTCAGAAATCATTGGATGTGCTCTTGTTGCCTTAAGTTTAGTtggcacattaaaataaagtcagaTTGGTCCGGTATAACTGATTAAGTTGAAGCCAATGTGtatagttgttttgttttgtttttttaaatcatgaaaaCGCATCAAGAAATCGTGATGTAAAGTGACTTCATTGGTTTTCTTTATGTAGGATGCTTTTAATTATGGTTTGATTTTCTTCATTATACCACTGTATTGCATTACATGTTCCTTGTGACTATAACCTACCTTGTCTCAAAGATGATTTCTGTTACAGTTCCTCTTCCTCAATTCCTCCAGCAGAGCCCAGTAAATAAAACTGAGCTTCGTGATGCAGACAGAGATATAAAGATACATAGGATATATAATTAcagatataaatgtatattcactACTTATTCGTCAACTCTGTCTCGGGTCTAAgtattttagttcttttttatgagagagagagagagagagagagagagaacatttgTGTATTGCATGCcaatttacagtatatttcttAAACTTTTTGAGCAGTTTATAACATGTAAATGTCATTCTTTCgagtaaaattttaaaattggtAGCGCTGCATATGTTAAGTTCAGCAAGTTAAAGCAAGTTGACAAGTATGTTTTGGCACAGACTTACATGGTAATATCTGATGTATAAGCTAATCTTGAGATTTGGACACTGAGCCCCTCGTTTTTcgtaaataaatcacaaaaacccA

Function

NR:

description
PREDICTED: bromodomain-containing protein 3-like isoform X3

GO: NA

KEGG:

id description
K11722 BRD4; bromodomain-containing protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240305.1 True 4509 mRNA 0.44 12 20664933 20677943

Neighbor

gene id symbol gene type direction distance location
LOC122345840 cmlc1,LOC107095684,LOC103473836,LOC105934481,LOC102226792,LOC103150158,LOC103390188 coding upstream 285268 20378889 ~ 20379665 (+)
LOC122344786 gpsm1a,LOC107740834,LOC107595532,LOC107587727,LOC107672581 coding upstream 294693 20369045 ~ 20370240 (+)
LOC122345838 fam78aa,LOC107731022,LOC107672534,LOC107740833,LOC107552624,LOC107665027 coding upstream 353483 20308522 ~ 20311450 (+)
rxrab rxrab,LOC107660328,LOC107672569,LOC107740802,LOC107731035,LOC107552637,LOC108255946,LOC108423686,LOC103046247 coding upstream 385744 20232184 ~ 20279189 (+)
LOC122345846 LOC107587725,LOC107660331,LOC107672538,LOC103911143 coding upstream 446885 20211867 ~ 20218048 (+)
LOC122345098 gpsm1a,LOC107587727,LOC107595532,LOC107672581 coding downstream 55679 20733622 ~ 20739157 (+)
LOC122345842 gpsm1a,LOC107587727,LOC107595532,LOC107672581 coding downstream 96456 20774399 ~ 20783388 (+)
ak5l ak5l,LOC107731024,LOC107665022,LOC107740835,LOC107595531,LOC108255392,LOC108423692,LOC107672580 coding downstream 106918 20784861 ~ 20790622 (+)
LOC122344887 cmlc1,LOC107095684,LOC103473836,LOC105934481,LOC102226792,LOC103150158,LOC103390188 coding downstream 114261 20792204 ~ 20792978 (+)
ciz1b LOC107740837,LOC107595499,LOC107665018,LOC107688644 coding downstream 289860 20967803 ~ 20973466 (+)
LOC122345853 NA non-coding upstream 27664 20611326 ~ 20637269 (+)
LOC122345855 NA non-coding upstream 86938 20577384 ~ 20577995 (+)
G38093 NA non-coding upstream 104924 20532224 ~ 20560009 (+)
G38091 LOC107699781,LOC107552636,LOC107587661,LOC107672574 non-coding upstream 112627 20170974 ~ 20552306 (+)
G38082 NA non-coding upstream 272309 20127401 ~ 20392624 (+)
G38132 NA non-coding downstream 20404 20698347 ~ 20699025 (+)
G38118 ak5l,LOC107731024,LOC107740835,LOC107672580,LOC107665022,LOC107595531,LOC108423692 non-coding downstream 66615 20744558 ~ 20746880 (+)
G38199 NA non-coding downstream 260890 20938833 ~ 20943113 (+)
G38209 NA non-coding downstream 268402 20946345 ~ 20950998 (+)
LOC122345965 NA non-coding downstream 303084 20981027 ~ 20999088 (+)
G38094 olfm1a,LOC107672574,LOC107587661,LOC107552636 other upstream 102581 20558827 ~ 20562352 (+)
G38092 LOC107699781,LOC107552636,LOC107587661,LOC107672574 other upstream 151017 20185035 ~ 20513916 (+)
LOC122345834 lix1,LOC107587723,LOC107672536,LOC107699708,LOC107552634 other upstream 248426 20407768 ~ 20416507 (+)
LOC122345823 LOC107740804,LOC107665032,LOC108255802,LOC107672563,LOC107731037 other upstream 367711 20284617 ~ 20297222 (+)
lix1 lix1,LOC107552634,LOC107699708,LOC107587723,LOC107672536 other upstream 513247 20143283 ~ 20151686 (+)
pappab pappab,LOC107665047,LOC107587665,LOC107667798,LOC107595518,LOC107731007,LOC107740823 other downstream 137478 20815421 ~ 20888271 (+)
cntrl cntrl,LOC107740813,LOC107665016,LOC107688625,LOC107731033,LOC107587713 other downstream 368997 21046940 ~ 21069517 (+)
tecta tecta,LOC107665015,LOC107688634,LOC106603728 other downstream 407005 21084948 ~ 21120840 (+)
LOC122345215 specc1,LOC107712164,LOC107665038,LOC107731042,LOC107688619,LOC107587672 other downstream 502501 21180444 ~ 21260715 (+)
adora2b adora2b,LOC107712140,LOC107665025,LOC107595487,LOC107688642,LOC107731023,LOC107587731 other downstream 583611 21261554 ~ 21270874 (+)

Expression


Co-expression Network