ak5l (ak5l,LOC107731024,LOC107665022,LOC107740835,LOC107595531,LOC108255392,LOC108423692,LOC107672580)


Basic Information

Item Value
gene id ak5l
gene name ak5l,LOC107731024,LOC107665022,LOC107740835,LOC107595531,LOC108255392,LOC108423692,LOC107672580
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 20784861 ~ 20790622 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240317.1
GGGAAACGCAACAGATGAGCAGATAGACACAGCTACTGCTCCACTGACTTACAAACGCTGCTCTGGATAACCGGCGAGAATGAACACAAACGACGCGAAGGATTACCTCTCCAAACGACAGATCCCACACCTTTTTGAGAGCATGTTAACAGGCCTGATGTACCACAAACCTGAGGACCCTTTGGCATTCTTGGAGGGTTGCCTGCAGAAAAACACGAGATCTTGGGGTCCTGAATGTGTGGCTTGGGACACTTTTATTACACCTGATCGAAAACCTCTACCACCGATACCCGGCACAGGGAAAGAAAGCCCCTGCAAACTCGACGGCGGTCCTGGTCCAGGCCCCGGTCCTTACCGTCGATATGACAGGCTGCCACCAATCCAGGCCCAGTTCTCCATAGAAAGCGACTCAGATATGACGGAGTCCTCGGGGCTCATACAGGAATATGATGTATTCGACCCAACAAAGTCACGACCACACATCATATTCATTATAGGTGGACCGGGCAGTGGAAAGGGCACTCAGACAGCTAAACTTGCACATCACTATGATTACGAGCATGTGTCCGTGGGGGAAATTTTAAGGAACCAGTTGCTGCATCATGCCCCCAGCGACAGGAAATGGGAACTGATTGCTCAAATCATTGCCAATGGAGAACTGGCGCCTCAGGAGACAACTATTGAAGAGCTGAAGCATCAGTTTATCAAAAAGCAGGATGCTAAAGGCTTCATTGTGGATGGATTCCCCAGAGAGATCTCACAGGCGTTCACCTTTGAGGAACAGATTGGCTCGCCAGACTTGGTGGTCTTGCTTGCCTGCTCCAATCAGCAACTCCGGCAACGTCTAGAGAAAAGAGCGTCCGAGCAGGGCCGCCCCGACGACAATACTCACGCTATTGAGAAGAGACTAGatacatttaaacacaatatCACACTCATAGCCAAGTACTACCAGGAGAGAGGGCTTATTGTAAGGGTTGACGCTGATCGAGAAGAAGATGACATTTTCACAGACATTTGTACCATTGTCAAGGAGAGACTGTTCCCTAGCGACACAAATCCAAGTGGTACGGAAGATCTTTAGAGGGACGTCTAAACATCCAAACAGCTGCTGCCATTAAAtccaaaatgtcaaaagcagcctgccaaacattttattttaccataatTCTTCAATAATAAACTTGTGGGTCAGAGTCGAGGATCAGGGACAAGAGTTAAGGagaaatataatatactgtatattttacaatcaTTGTTGACTATTTGTACTTCACTGTGAATCTTCTCTACAACTTCTACGGTAATTTAATAAGAATGACTTTTTAGAGCAGAACATTTTTTccaacattttctgtttttgaatattATGTTTgactttatattaatgtatatttggATCTTAAGccagtaatagtaataataaaacataatataatatgctgAAAAAACATACCTATTCctgtaaaaaacattacaaggaTTAAATAATTTCTGATTAATAACTAGTTCACTTATGAATGTAGCATTTCTTGTTTTATCTTACTTCACAA

Function

symbol description
ak5l Predicted to enable nucleoside diphosphate kinase activity. Predicted to be involved in nucleoside diphosphate phosphorylation and nucleoside triphosphate biosynthetic process. Predicted to act upstream of or within nucleobase-containing compound metabolic process and phosphorylation. Predicted to be active in cytosol. Is expressed in diencephalon; pancreas primordium; tegmentum; and telencephalon. Orthologous to human AK5 (adenylate kinase 5).

NR:

description
PREDICTED: adenylate kinase isoenzyme 5-like

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0019205 nucleobase-containing compound kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240317.1 True 1553 mRNA 0.43 9 20784861 20790622

Neighbor

gene id symbol gene type direction distance location
LOC122345842 gpsm1a,LOC107587727,LOC107595532,LOC107672581 coding upstream 1473 20774399 ~ 20783388 (+)
LOC122345098 gpsm1a,LOC107587727,LOC107595532,LOC107672581 coding upstream 45704 20733622 ~ 20739157 (+)
LOC122345824 LOC107740804,LOC107665032 coding upstream 106918 20664933 ~ 20677943 (+)
LOC122345840 cmlc1,LOC107095684,LOC103473836,LOC105934481,LOC102226792,LOC103150158,LOC103390188 coding upstream 405196 20378889 ~ 20379665 (+)
LOC122344786 gpsm1a,LOC107740834,LOC107595532,LOC107587727,LOC107672581 coding upstream 414621 20369045 ~ 20370240 (+)
LOC122344887 cmlc1,LOC107095684,LOC103473836,LOC105934481,LOC102226792,LOC103150158,LOC103390188 coding downstream 1582 20792204 ~ 20792978 (+)
ciz1b LOC107740837,LOC107595499,LOC107665018,LOC107688644 coding downstream 177181 20967803 ~ 20973466 (+)
surf4l surf4l,LOC107740812,LOC107688631,LOC107595501,LOC107665048,LOC100304967,LOC108423697,LOC103043297 coding downstream 183324 20973946 ~ 20980386 (+)
prdm12b prdm12,prdm12b,LOC107688643,LOC107665021,LOC107740838,LOC107731029,LOC108423597,LOC103042983 coding downstream 236228 21026850 ~ 21030937 (+)
c5 c5 coding downstream 241105 21031727 ~ 21046644 (+)
G38118 ak5l,LOC107731024,LOC107740835,LOC107672580,LOC107665022,LOC107595531,LOC108423692 non-coding upstream 37981 20744558 ~ 20746880 (+)
G38132 NA non-coding upstream 85836 20698347 ~ 20699025 (+)
LOC122345853 NA non-coding upstream 147592 20611326 ~ 20637269 (+)
LOC122345855 NA non-coding upstream 206866 20577384 ~ 20577995 (+)
G38093 NA non-coding upstream 224852 20532224 ~ 20560009 (+)
G38199 NA non-coding downstream 148211 20938833 ~ 20943113 (+)
G38209 NA non-coding downstream 155723 20946345 ~ 20950998 (+)
LOC122345965 NA non-coding downstream 190405 20981027 ~ 20999088 (+)
G38297 NA non-coding downstream 499309 21289931 ~ 21425456 (+)
G38302 NA non-coding downstream 699045 21489667 ~ 21549253 (+)
G38094 olfm1a,LOC107672574,LOC107587661,LOC107552636 other upstream 222509 20558827 ~ 20562352 (+)
G38092 LOC107699781,LOC107552636,LOC107587661,LOC107672574 other upstream 270945 20185035 ~ 20513916 (+)
LOC122345834 lix1,LOC107587723,LOC107672536,LOC107699708,LOC107552634 other upstream 368354 20407768 ~ 20416507 (+)
LOC122345823 LOC107740804,LOC107665032,LOC108255802,LOC107672563,LOC107731037 other upstream 487639 20284617 ~ 20297222 (+)
lix1 lix1,LOC107552634,LOC107699708,LOC107587723,LOC107672536 other upstream 633175 20143283 ~ 20151686 (+)
pappab pappab,LOC107665047,LOC107587665,LOC107667798,LOC107595518,LOC107731007,LOC107740823 other downstream 24799 20815421 ~ 20888271 (+)
cntrl cntrl,LOC107740813,LOC107665016,LOC107688625,LOC107731033,LOC107587713 other downstream 256318 21046940 ~ 21069517 (+)
tecta tecta,LOC107665015,LOC107688634,LOC106603728 other downstream 294326 21084948 ~ 21120840 (+)
LOC122345215 specc1,LOC107712164,LOC107665038,LOC107731042,LOC107688619,LOC107587672 other downstream 389822 21180444 ~ 21260715 (+)
adora2b adora2b,LOC107712140,LOC107665025,LOC107595487,LOC107688642,LOC107731023,LOC107587731 other downstream 470932 21261554 ~ 21270874 (+)

Expression


Co-expression Network