pigl (pigl,LOC107746821,LOC107680910,LOC107552588,LOC107718344,LOC107676669,LOC107575753)


Basic Information

Item Value
gene id pigl
gene name pigl,LOC107746821,LOC107680910,LOC107552588,LOC107718344,LOC107676669,LOC107575753
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15684803 ~ 15705172 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240510.1
AAGTTCCACACGGACTCTTTTATGGCGCGGTCaagatgtttgttttcattaccATCATCTTTGTCTTTGTGGCTTACAATATTTCTATAAAGTTTGTGTATTACAGATATAGTAAATTATGGCCAtacttaattaataaaatatcaacgCCTTTATGCACCGTTGGAAACGCGAGTTTTTGTCCGACTCAAGAGAGGTCCAGCGCGCTTTTACGGAACACAGGGGATGACAAGCCGCGCGTTACAGCCAGCGAGACTCGAGCGCTGTTAGTCACTGCACATCCAGATGATGAATGCATGTTCTTTGCACCTACAGTCTTAAAACTTGTTgaatcacaagcagctttttatttgttatgtttgtCGACAGGCAATTACAACAATCAAGGACTACAGCGCAAAAGAGAACTGCTTGACAGCTGTGCAGTTCTAGGAATCCCGTCCGACCATGTCACCATCATAGATGACAAAGAGCTTCCAGATGACCCCACGGTCCAGTGGAGCACCGCAGCTATCTCCTCTCTGATCCTCAAACACATCCGAAACTACAGCATAAGTGTGGTATTGACATTTGATGGCAGTGGTGTGAGTGGACATGCAAATCATATTGCCATCTACATGACACTCAGGCATCTAGCTTCCGCTGGACGAATACCTGAAGGTTGTCAGATCTTCTCTCTTCACTCCATCAGCTTACTTAGAAAGTACGTGTCAGTCCTAGAGCTGCCCATCAGCTGGCTCCTCCCCTCTGATTTCTGCTGCATCATTGGACAGGATGAGTATAACCGTGCCAAGAAAGCCATGCTCTGTCATCGCTCTCAGCTGCTGTGGTTTCGCCGACTCTACATACTTTTCTCACGCTACATGTTTGTAAACACATTCCAGGCCATCACCGTGGAAACAAAGAATGTGAAGATTTATTAGCTTAGATTGTCTTGGGCACTGTTCCTGTCCATGTAGGACTAAAATTATGCACTGAAATTTTAAACAAAGGTTTACtttgtttataattaatttgtttatatatttatattatatatatatatatatatatatatatatatatatatatataaagactgTACAACAATATATCAATAAGGTTCAGTCAGCATATCCAGCCTACAGACACTAACGGAGAACTGCTGGTATAATGAACCTTAGAGACTTTTATACCAAACAATACAATGTTCTGAAAGCCAGATTTCCTGGGAGGTTTAGGGGACTTAAGCGCTTTATTTGAGTAGTTAAATCCAAAACACAGATTGTGCCTTTGAGTTTAAAGGTGGTGAAGCACGAAATGTGATTCTGTACAtcgtttacattttctgttactGTTGTTATTAGATGTTGTTGTTAatgttattgatttattaaagtaGACTTCCAAGAAAAGCACTGTTCCAAATGGATAAACAAGTACTGTACCAAATCTTATGATTCAGTATGTTTTCAAAACTGACATGTTTTTCTGATTTCCTTGAGTGAAGTCTGTAACTCTGTTAGTATATTCTGTAATGACTTCTAATGTAGAGCaatgtaataattttgtttaaaa

Function

symbol description
pigl Predicted to enable N-acetylglucosaminylphosphatidylinositol deacetylase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in CHIME syndrome. Orthologous to human PIGL (phosphatidylinositol glycan anchor biosynthesis class L).

NR:

description
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase

GO: NA

KEGG:

id description
K03434 PIGL; N-acetylglucosaminylphosphatidylinositol deacetylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240510.1 True 1557 mRNA 0.39 7 15684803 15705172

Neighbor

gene id symbol gene type direction distance location
bcl7a LOC107552594,LOC107746817,LOC107680981,LOC107708648,LOC107553587,LOC107676671 coding upstream 116557 15564146 ~ 15568246 (+)
cfap251 LOC107746856,LOC107681387,LOC107577995 coding upstream 121045 15555922 ~ 15563758 (+)
LOC122344704 NA coding upstream 180197 15500502 ~ 15504606 (+)
LOC122345300 vcp,LOC107681079,LOC107708640,LOC103357444 coding upstream 213386 15463434 ~ 15471417 (+)
fancg fancg,LOC107552563,LOC107746873,LOC107602006,LOC107708626,LOC107681392 coding upstream 221848 15457352 ~ 15462955 (+)
ubb ubb,UBC,LOC107553588 coding downstream 4807 15709979 ~ 15712715 (+)
p2rx5 LOC107680863,LOC107746824,LOC107552584,LOC107676654,LOC107718329,LOC107553591 coding downstream 12694 15717866 ~ 15726181 (+)
shpk shpk,LOC107680869,LOC107553593,LOC107718345,LOC107736096 coding downstream 23259 15728431 ~ 15732835 (+)
LOC122344749 LOC107680837,LOC107552580,LOC107746822,LOC107680853,LOC107552581,LOC107746861,LOC107718347,LOC107676666 coding downstream 28764 15733936 ~ 15755185 (+)
trpv1 LOC107680853,LOC107552581,LOC107680837,LOC107552580,LOC107746822,LOC107746861,LOC107676666 coding downstream 43795 15748967 ~ 15755185 (+)
G36948 NA non-coding upstream 37696 15643295 ~ 15647107 (+)
G36937 LOC107680951,LOC107553567,LOC107746860,LOC107552540,LOC107718342,LOC107676644 non-coding upstream 61510 15621825 ~ 15623293 (+)
G36918 LOC107746818,LOC107680961,LOC107552589 non-coding upstream 84642 15595448 ~ 15600161 (+)
G36926 NA non-coding upstream 101141 15578118 ~ 15583662 (+)
G36852 NA non-coding upstream 179050 15505174 ~ 15505753 (+)
G36984 NA non-coding downstream 7805 15712977 ~ 15713194 (+)
G37023 NA non-coding downstream 107931 15813103 ~ 15814248 (+)
G37024 NA non-coding downstream 109681 15814853 ~ 15815065 (+)
G36993 NA non-coding downstream 116720 15821892 ~ 15823751 (+)
G37038 NA non-coding downstream 154587 15859759 ~ 15860103 (+)
G36640 NA other upstream 964316 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 1031892 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 1334812 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 1347038 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 1379499 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 686625 16391797 ~ 16395562 (+)
G37227 NA other downstream 769536 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 781448 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 1659677 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 1820852 17526024 ~ 17527444 (+)

Expression


Co-expression Network