nol6 (nol6,LOC107699715,LOC107587545,LOC107579382)


Basic Information

Item Value
gene id nol6
gene name nol6,LOC107699715,LOC107587545,LOC107579382
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 18832815 ~ 18842452 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240550.1
CAGTTCGTGGTTAGTGTGTCCCATGCGTTTCCCATGTGAGAGACGCGTTGAGACTGTAAATTTGAAGGAATTGTATATTaacgcattaattaattatttgaatatatccTTGTAAAAGCTATCTGTAACTTCTGTcaaaatgaagaagaagagaaaggaaTCATCTAAAACTGAAACGGAAGATCAGattgAGTTACTAGCTAACTCtcagaatgaagaagaaaatgagaaaaacagtaTACAACAGGCTAAGTACTCCAAACGAAAAGCGAAGGACACCGTGTCAGATGATAGGATCTTACGACCAGTCAAGCTGTCCAAGAAAGAGCTGTACAAAGCCCCAACAGTGGAAGAGCTCAACCAGCTAAAAGAAGCAGAGAATCTCTTTCACTGCAGCATGTTGAAAATGCAGATGGAAGAACTGCTGAAAGAAGTGTCTCTCAGTGAGCACAGGAAGAAGCTTGTGGACTCCTTTGTGCAGCAGGTCACTGATGTGTTGCAGAGTGTGCCCGAATCTGAAGTTGTGGAGTTGGATGACATTTCATGGTTGTCAGGTGTTGAAGTCCCATTCCTCCTCGTCCCATCAACGACAAAAGGCAAATTTCATATGGAGCCTCCTAAATCAATCAACCTGGTGGGCAGTTATCCACTGGGCACGTGTATCAAACCCAAAGTCTCTGTGGACTTGGCTGTTACCATTCCATCTTCTATTTTGCGCCAGATGGATGCCATTAACCAGCGGTACTCCCGAAAGCGGGCTCTGTATCTGGCTGCCCTGGCACGGCATCTCTCCTTCGCAGACTGCGTGGGTTCACTGCAGTACTCTTGTCTACATGGCAACCGACTTCGCCCAGTGCTACTACTCAAACCCCCAGGTAATGACAGCAGTAAGGTCACATTAAGGATTCACGTCGTTCCGCCACCGGACTTCCTCAAACCGAGCCGCTTCCATCCTCAGAAGAACAACATCAGGACCGAGTGGTTTACTGGTGTTGCCAATACGCAGCAAGAGAGAACTGAGTCCCCAACTCCTCATTATAACGCCACAGTTCTTGGAGATCATCTCCCACTGTCACATCTTCAGTTCCTGTCAGCCATCAGTGCCCAGTGTCCTGCTTTTGGAGAGGGTGTGTCTCTCCTCAAAGTGTGGCTAAGACAGAGAGAACTGGACCAGGGTGCAGGGTGTTTCTGCGGCTTCCATGCATCAATGTTAATGGCATATCTTCTGTCCACACACAAAGTGGCCAAATCCATGAGTCCCTACCAGCTGTTGAGAAATGCACTGCACTTCTTGGCTTCTACAGATCTGACAGAGAACGGTATCACCTTGGCTAAAAACCCAGATTCAAAAGCGCCTTCTCTGCCGGAGTTTCACACAGCATTCTCTGTGGTATTTGTGGACCCCTCTGGGCATCTTAATCTGCTTGCAGATATGACAGCTTTTACCTACAAACGGATCCAGCATGAGGCATCACTCTCCCTGTCGTTCTGGGATGATCCAACAACAGATGGCTTTCAGGCTCTGCTCATGACGCCTAAATCCATGATCAGAACATACGATAATGTCTTTAAgcTGGTTAACCTGGTGAAATTGCAGACCTCCTGTAAAAAGCTTTTACTCCTGAATGAGCTCATGGACCACAGCGGGAACTATGTCATCGCTGTACTTCCTTTCATTTTGTCCCTCTTGCAGCAAGGGCTTGGACAAAGGATCCAGCTTCTAGTACACTCGCTTCCTCAAGACCCTGAGTGGCCATTGGACAGTGAACCTCCAAAGCTCAAGGACCAACCGCCTCTGAGCATTGGTTTGCTGTTGAACCTTGAAAATGCTCTCTCTATTCTTGAGAGAGGACCCCCGGCAGATAGCCCTAAGGCAGCTGAGTTCCGGCAGCTGTGGGGCTCTTGCTCAAAGTTGCGGCGCTTTCAGGACGGATCCATCACTGAGGCAGTGCTGTGGACAAAGAAGTCCATCTCTCAGAGGAGATTCGTTATACTGAAAATCTTTACTCATCTGCTACACCTTCATGCAGATATCCCCAAATCATCCATCAGATTTGTTGGCGGACAGCTGGATGTTCTCGTTAGATCTAGCATAGAGGGCCACACTACAGGAGAAGAGGAGAGTCTGGAGGTTGTTCAAGCTTACGATGATCTGAGCAAGAAGCTCTGGCAGTTGGAGGATCTCCCACTGTCCATCACGTCAGTGCAGGGTGCCCACCAGGCCTTAAGATGCACACAGGTTTTCCCACCAGTTCCTGTGAAGCTGGACTCTTCATTTTTTGACAAAAAGGCTGGTCTTGGATTCGTGCCAAAGGAGGACAAACCTTGCCCTTTCTACATAACCCCTATTAAAGtcATTGTTCATATGGAGGGAAGTGGAAAATGGCCCGGTGAGCCCTTAGCAATACGCCATGTTAAAGCAGCTTTTCACGTCTGCTTGAGAGAACTGCTCAGCAAACAACACCATTACAGATGCCAGGCCACACCTGACTACCTGGATGTGTGGAAGGACGGACTAGTCTTCCGAATCCAGGTGGCGTATCACAGAGAGCCGCAGATCCTGAGGGAAAGCCTGACCCCTGAGGGAATGCTGATCTACAGGGACAACGCTGAGGCCCAGGCACTGGAGCTGGAGACCTTGCACAAACCTTTCCTAACCAGCACCTTGCATggGGTCCAGCAGCAGTTTGGGTGTTACGGTGTTGTGTGCCGCCTGGTTAAACGCTGGTTGGCATCTCAGTTTCTGTTGGAAGATATCCGAGAGGAAGCAGCTGATCTGCTTGTGGCTTCGCTCTTCCTACATCCTGCTCCCTTCACTCCACCAAGCTCTCCTCAGGTGGGGTTCCTTCGCTTCCTTCATTTGCTCTCTACATTTGACTGGAAAAACAATCCCCTGATAGTCAACCTCAATGGGAAGCTCACAGctaTTGAACAAACGGATATCAAGAATAACTTTGTGGCCTCTCGAGGATCTCTTCCCAGCATGTTCATAGTCACTCCCAAGGACATAAAAGTCTCTGTTTGGACTAAGGCGGCTCCTTCTGTGCAGATGCTCCAGCGCTCCATCATGTTGGCAGCAGAGAGTCTCCGTGTTTTAGAGAATCAGCTTGGCTCCAGTGAAAAGCAGGACATGCGGgTGGCATTTCGACCCCCTCTGGAGGCTTATGATGTTCTGATCCACCTCGATCCAAAGCAGGTTCCTCTGTTAGCTAAAGCTGTGGATCCTCATGCCGAAACCTTTCAGCGAGGCACCCATCAAGAGCAACCGCTCGCTTCTGGAGCATTTCTGCCAGTCATAGACTATGATCCCGTCAGACTGTATCTCTCTGAACTCAGGGAAGCATTTGGAGATCTGGCGTTGTTTTTCTATGACCCGATTGGTGGGACTGTGATCGCAGTGCTGTGGAAGCCAGCTGCCTTTGAGCCCAAACCCTTtaagGCATCTTTAATAAACGCCCGCCAGGTGGAGGTGAATGACAATGTGGCAACCACCGTGCCGAATGTAGAAGCCATCCTGCAGGATTTCCGCATCATTGGAGAGGGCCTCGTCAAAAGATTGGAACTGAGAACAGAAAAATGGGTTCTCTAGGAGCTGGCAGTAGTTTCTGTAGAAATAACTGTTGTTTTGgatgttgctgtttttacttgTGAAATTGCTTCAATTAAATTCCttgccttttaaaaatattggtatattgtattattttaattaagtaaCAAGCGTGTTTTCCCTTTACACAATGACTTGTGACTAAAAATCTTCATAAAGGCCACTATTTGTTTGATTCAACCCAATTCCCCTACACCTTTATTACTGCATTGTTGACAATAAAAAAGTTACAgta

Function

symbol description
nol6 Predicted to enable RNA binding activity. Predicted to be involved in rRNA processing and tRNA export from nucleus. Predicted to be located in membrane and nucleus. Predicted to be integral component of membrane. Predicted to be part of CURI complex; UTP-C complex; and small-subunit processome. Orthologous to human NOL6 (nucleolar protein 6).

NR:

description
nucleolar protein 6

GO: NA

KEGG:

id description
K14544 UTP22, NOL6; U3 small nucleolar RNA-associated protein 22

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240550.1 True 3845 mRNA 0.48 26 18832815 18842452

Neighbor

gene id symbol gene type direction distance location
fam81b fam81b,LOC107699714,LOC107703202,LOC107587521 coding upstream 17885 18805984 ~ 18814930 (+)
slf1 slf1,LOC107703243,LOC107756294 coding upstream 156140 18648765 ~ 18676675 (+)
nr2f1a nr2f1a,nr2f1,LOC107671052,LOC107567418,LOC107699709 coding upstream 463293 18361873 ~ 18369522 (+)
adgrv1 adgrv1,LOC107660972,LOC107669515 coding upstream 820021 17907408 ~ 18012794 (+)
polr3g polr3g,LOC107669519,LOC107557435,LOC107756241 coding upstream 933193 17896074 ~ 17899622 (+)
cert1a col4a3bpa,LOC107720288,LOC107587519,LOC107703248,LOC107555488 coding downstream 5484 18847936 ~ 18867441 (+)
ankrd31 LOC107699692,LOC107587543,LOC107720237 coding downstream 36587 18879039 ~ 18884885 (+)
LOC122345996 NA coding downstream 42605 18885057 ~ 18889935 (+)
gcnt4a LOC107699693,LOC107720226,LOC107587561,LOC107703224,LOC107555473,LOC107756273 coding downstream 47565 18890017 ~ 18891306 (+)
LOC122345689 NA coding downstream 58059 18900511 ~ 18914080 (+)
G37540 NA non-coding upstream 82760 18678596 ~ 18750055 (+)
G37497 NA non-coding upstream 442749 18373499 ~ 18390066 (+)
G37501 NA non-coding upstream 444813 18386010 ~ 18388002 (+)
G37495 NA non-coding upstream 479350 18350686 ~ 18353465 (+)
G37492 NA non-coding upstream 553022 18279536 ~ 18279793 (+)
G37618 NA non-coding downstream 80850 18923302 ~ 18924676 (+)
G37619 NA non-coding downstream 82758 18925210 ~ 18925433 (+)
G37620 NA non-coding downstream 82985 18925437 ~ 18927002 (+)
G37734 NA non-coding downstream 445564 19288016 ~ 19288328 (+)
G37843 NA non-coding downstream 751618 19594070 ~ 19647075 (+)
LOC122345691 NA other upstream 1305371 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 1459956 17364849 ~ 17372859 (+)
G37228 ncor2,LOC107742750 other upstream 2271074 16486620 ~ 16561741 (+)
G37227 NA other upstream 2272083 16474708 ~ 16560732 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 2437253 16391797 ~ 16395562 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other downstream 367 18842819 ~ 18847674 (+)
G37626 LOC107720210 other downstream 96361 18938813 ~ 18940895 (+)
msh3 msh3,LOC107720281 other downstream 119870 18962322 ~ 19014100 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 864836 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 1125125 19967577 ~ 20035380 (+)

Expression


Co-expression Network