LOC122346079 (LOC107720263,LOC107756281,LOC107699747,LOC107567145,LOC107703219)


Basic Information

Item Value
gene id LOC122346079
gene name LOC107720263,LOC107756281,LOC107699747,LOC107567145,LOC107703219
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 19578598 ~ 19582066 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240750.1
ATGAAGATCGCTGTTCTTGGCGCGACTGGTCAGACCGGACTGGAGCTGGTCAGTCAGGCTCTTCAGCAAGGACACTGCGTCACGGCTGTCGTCAGAAACCCGGGAAAACTCGCGCTGACGCACGAGAACCTCAAGGTGGTTGAAGCAGACATATTCTCAGAAGACAGCCTGAAATTGCATTTCAAAGGTCAGGATGCTGTACTGTCCTGTCTTGgctttcctctctcttttttatacGGAGTCACTGGCTACACCCAGTCCATGAAGGCGGCATTAAATGCCATGCGTGAAGTCAAAGTCAATCGAATCATCACCATGACCTCATGGTACACTGACCCTAATTCAGGCTCCAATTCTTCCTTTCTCATCCGCTTCATGTTGCTTCCCATGATTAGAAGTGTTCTGAACAACATGTATGAAATGGAAAACTTTCTCAAGCAGACTGACGACATCAACTGGACTGTTGTCCGTCCACCTGGTCTCAAGAATATACCAacaacagCCGACGAGTTCCTCACTCATGAAGGTTATTATGTCCCTGATGAAAACGGCCTGCCGATCGGTCAGTCTGTGTCCAGAGGAGATGTGGCTCGTTTCATGCTCTCTCTACTCAGTAACAACGCTTGGATGAAGAAAGCTGTTGCTATCATCACCAAATGAGTTTTCACTtcgctttattttcattacttgTTTAGCACTTGCCAAAGAGCTTTTAACAGTTCGATTCAATGTATAAATCAttctattttttcattttattattttaaatcaagctgCAGTACTTATTCAGTACATCTGGCTTTTTGTCACACAGTCAGCAGTTAGCAAGGTCTGTCAGACTTATAATATGTTTGTCTCATACATACAGTTTCCATGTACTAATTTCTAAaggatttaaaacatttcagaattacaagaaaatataattcataaaatcataaaacatattttaggacatttaaatggttttgaaatgaaaatgaagagcaacgaattaaatattattacttaaaacagccacatttttattaacatactCAAAACATACTCCTTCATAATCATTTGTAGTTTACTAATATCTAGCCTATATGCATATTTGTTGAGTTACTGCATAATACAAAACACATCGGTGTTGGGGCGTTTTACAATACATTACTGACAAGACACGAACAGTGCAGGTTATTGATTTCTTTGTATTGCAATTGttttacttgaatattttatgctcatttatgtattatctatttttttgttttgttttacagctATGTTACATACATTCTTAGAAGTttagtttgaaattaaaaaagataaataagataaaaaagataaataaggCCTGAGCACACTGATGGCGGCCTGCTATGAAACATAAAGTTGTAAGCtatgtatgaaaatgtaaaaatgcatcaatGAAGTACACTACAACAAATAACATGTAGTTCCTTACACTAAACACTAGATGGCTCTTCACATTGCTTAAAGCCACTGGAAGTAATGTCTCCATTTGGTGAAACAGGCAGTTTTGAATGAACACACAGAAATCTGCTTGTGTCTTATGACCACGTGACCGCAGTGCCCAATTAAATTTAAGAATAgc

Function

NR:

description
PREDICTED: flavin reductase (NADPH)-like

GO: NA

KEGG:

id description
K07118 K07118; uncharacterized protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240750.1 True 1600 mRNA 0.38 4 19578598 19582066

Neighbor

gene id symbol gene type direction distance location
scarb2a scarb2,LOC107699748,LOC107567147,LOC107703216,LOC107756261 coding upstream 19249 19546728 ~ 19559349 (+)
LOC122344925 LOC107720221,LOC107699684,LOC107703270,LOC107756316,LOC107577860 coding upstream 45528 19521428 ~ 19533070 (+)
apba1a apba1,apba1a,LOC107587500,LOC107720269,LOC107756314,LOC107567151 coding upstream 71871 19458358 ~ 19506727 (+)
ptar1 LOC107699739,LOC107587501,LOC107567149,LOC107703268,LOC107756313 coding upstream 120858 19448258 ~ 19457740 (+)
trnap-ugg_3 NA coding upstream 160429 19418098 ~ 19418169 (+)
mrps30 mrps30,LOC107699686 coding downstream 15484 19597550 ~ 19599695 (+)
cplx4b cplx4b,LOC107587492,LOC107567130,LOC107672561,LOC108423624,LOC107720257,LOC107699754 coding downstream 23914 19605980 ~ 19608057 (+)
prlrb LOC107720254,LOC107756284,LOC107672558,LOC107567136,LOC107587530 coding downstream 37275 19619341 ~ 19629820 (+)
coq2 coq2,LOC107587489,LOC107699757,LOC107756326,LOC107567138,LOC107672553 coding downstream 63471 19645537 ~ 19649266 (+)
mboat4 LOC107720232,LOC107672543,LOC107567140,LOC107756285 coding downstream 77597 19659663 ~ 19664672 (+)
G37734 NA non-coding upstream 290270 19288016 ~ 19288328 (+)
G37620 NA non-coding upstream 651596 18925437 ~ 18927002 (+)
G37619 NA non-coding upstream 653165 18925210 ~ 18925433 (+)
G37618 NA non-coding upstream 653922 18923302 ~ 18924676 (+)
G37540 NA non-coding upstream 828543 18678596 ~ 18750055 (+)
G37843 NA non-coding downstream 12004 19594070 ~ 19647075 (+)
G37951 NA non-coding downstream 177645 19759711 ~ 19760204 (+)
G37956 NA non-coding downstream 212377 19794443 ~ 19867398 (+)
G37958 LOC107745529,LOC107672542,LOC107720246,LOC107552607 non-coding downstream 291176 19873242 ~ 19874144 (+)
G38082 NA non-coding downstream 545335 20127401 ~ 20392624 (+)
msh3 msh3,LOC107720281 other upstream 564498 18962322 ~ 19014100 (+)
G37626 LOC107720210 other upstream 637703 18938813 ~ 18940895 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other upstream 730924 18842819 ~ 18847674 (+)
LOC122345691 NA other upstream 2051154 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 2205739 17364849 ~ 17372859 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 125222 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 385511 19967577 ~ 20035380 (+)
lix1 lix1,LOC107552634,LOC107699708,LOC107587723,LOC107672536 other downstream 561217 20143283 ~ 20151686 (+)
G38092 LOC107699781,LOC107552636,LOC107587661,LOC107672574 other downstream 602969 20185035 ~ 20513916 (+)
LOC122345823 LOC107740804,LOC107665032,LOC108255802,LOC107672563,LOC107731037 other downstream 702551 20284617 ~ 20297222 (+)

Expression


Co-expression Network