LOC122346143 (cyp1d1,LOC107599971,LOC107673361)


Basic Information

Item Value
gene id LOC122346143
gene name cyp1d1,LOC107599971,LOC107673361
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10319660 ~ 10324635 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240831.1
CTTAGATTCTGTGGGCTGTGCAGTCACTGAGGCGCGCAGCCATTTTCGGCCGCTGAAACTTTCTGTGGTATTTTATTGCGAACACTGAATCTGTCTAAGAGTGGCGCCTAAGTCATTTGCAGCGTCTGCTATGTATGTTGAGGAGATCTCCCACACCACTGGAGTGACTTTGTTCCTCTGTGCCTTTGCTCTGCTTTTGCTGGTTGTTCATGGTCGATGGAGAGAACCAAGGTGCTCCTTGCCCCCGGGTCCCACACCTTGGCCTCTTGTGGGAAACCTTTTCCAGATGGGAGAACAGATCCATTTGTCATTAACAAACCTGAGGGTTCAGTACGGAGATGTGTTCCAGATGAAAATGGGTTCTCTTGTGGTGGTCGTTTTGAGCGGCTATTCTACCATCAAGGAGGCTTTGGTACGTCAAGGAGAGGCGTTTGCTGGACGTCCTGACTTCTTTACCTTCTCTGCTGTTGCTAATGGCACTAGCATGACGTTTAGTGAGAAGTATGGAGAAGCTTGGGTGCTTCACAAAAAGATCTGCAGAAATGCCCTGAAGACCTTCTCCCAAGCTGAGTCCAGAGACTCAAGTGCTTCTTGTCTTTTGGAGGAACGTATCTGTGCAGAGGCCATGGATATGGTGGAGACTCTGAAGGAACAAGGAGATGAGGTTGGAGATTTAGGGCTCGACCCGGTTAAGTTGCTAGTGACCTCGGTTGCCAATGTGGTTTGCACTCTTTGTTTTGGGAAGCGGTACGCCCATGACGATAAAGAGTTCCTCACCATCGTCGACATCAATAGCGAAGTGCTGCGCCTCTTTGCTGCGGGGAATCTGGCAGATTTTTTTCCCATCTTCCGTTACCTGCCGAGTCCATCTCTGCGAAAGCTGGTCCAGTGCATTCAAAGAATGAATAACTTCATGGAGCGCAACATCAGTGAACATCTCATCACCTTCGACAGgaattgtaTCCGGGACATCACTGATGCCCTAATAGCAATGTGTGAGGACAGGCAGGAGGAAGAAGAAACAGCAATGCTTAGCAACTCGCAGATCATCCACAGTGTCCTTGACATCTTCGGAGCCGGTTTTGACACGATCACCACCGGTTTGCAGTGGAGCCTTTTATATCTGATCAAgtttccagacatccaggccaaAATCCTTCAGGAGATAGAAAGCCAGGTTGGTATGAACAGGTTACCACAGTTTAAAGACAAGCCAAACATGCCGTACGCAGTAGCTTTCATATATGAAGTGTTTCGTCATGCATCCTATATGCCTTTCACCATACCTCACTGCACCACTGATAACATAACACTAAATGGATACTTCATTCCCAAAGACACATGCGTGTTCATCAACCAATATCAAGTCAATCATGACGTGGATATTTGGGCTGATGCTGAGGCTTTCCGACCTGAACGTTTCCTCACCGTGTCTggccatttaaacaaaaacctgACTGAGAAGGTAATGATATTTGGCATTGGAATACGCCGCTGCCTCGGTGACAGCTTTGCCCGTCTGGAGATGTTTTTGTTCTTAACCACCCTGCTCCATCAGCTGCACATAGAGAATGTTCCGGGGCAGGAGCTTGACCTGAGCTCTACATTTGCCCTCACCATGAAGCCCAGGCCCTTCCGAATAAAAATCTCAACTCGTAACTAAGCTGTATTTCAGATATTACATGTACACTAAATGGACCACGTATAAAATGCACCTCAGAACGGTTGCTACAAAGCTAATATTGGGCATCACTGAACTGCTAAGCTAATTAACCACTACAGTCTTCATTTCTTATGTGGTCTGTTCGGCTCAGCTGTTACTTGAATATTTGTTGTGTACTCTAAAGCATGCCCCGTCATTATTTCTGATAATACATGATAGCTAAGCTTCAGTTACTGCTTGTATTTTTAGCACAGATATTTGAAGTATGATGGTTTAAGATGTTAAAGTTGTTTCCGTGACATTGAAGGTTTAAAGAGGTATGCCTTTTGAAAAGGTGCTTtctgttaaatgtaaatattataaaatgtaaatattataaaattactatTAAATGTATTCTCAAATTA
>XM_043240832.1
ACTGAGGCGCGCAGCCATTTTCGGCCGCTGAAACTTTCTGTGGTATTTTATTGCGAACACTGAATCTGTCTAAGAGTGGCGCCTAAGCGTCTGCTATGTATGTTGAGGAGATCTCCCACACCACTGGAGTGACTTTGTTCCTCTGTGCCTTTGCTCTGCTTTTGCTGGTTGTTCATGGTCGATGGAGAGAACCAAGGTGCTCCTTGCCCCCGGGTCCCACACCTTGGCCTCTTGTGGGAAACCTTTTCCAGATGGGAGAACAGATCCATTTGTCATTAACAAACCTGAGGGTTCAGTACGGAGATGTGTTCCAGATGAAAATGGGTTCTCTTGTGGTGGTCGTTTTGAGCGGCTATTCTACCATCAAGGAGGCTTTGGTACGTCAAGGAGAGGCGTTTGCTGGACGTCCTGACTTCTTTACCTTCTCTGCTGTTGCTAATGGCACTAGCATGACGTTTAGTGAGAAGTATGGAGAAGCTTGGGTGCTTCACAAAAAGATCTGCAGAAATGCCCTGAAGACCTTCTCCCAAGCTGAGTCCAGAGACTCAAGTGCTTCTTGTCTTTTGGAGGAACGTATCTGTGCAGAGGCCATGGATATGGTGGAGACTCTGAAGGAACAAGGAGATGAGGTTGGAGATTTAGGGCTCGACCCGGTTAAGTTGCTAGTGACCTCGGTTGCCAATGTGGTTTGCACTCTTTGTTTTGGGAAGCGGTACGCCCATGACGATAAAGAGTTCCTCACCATCGTCGACATCAATAGCGAAGTGCTGCGCCTCTTTGCTGCGGGGAATCTGGCAGATTTTTTTCCCATCTTCCGTTACCTGCCGAGTCCATCTCTGCGAAAGCTGGTCCAGTGCATTCAAAGAATGAATAACTTCATGGAGCGCAACATCAGTGAACATCTCATCACCTTCGACAGgaattgtaTCCGGGACATCACTGATGCCCTAATAGCAATGTGTGAGGACAGGCAGGAGGAAGAAGAAACAGCAATGCTTAGCAACTCGCAGATCATCCACAGTGTCCTTGACATCTTCGGAGCCGGTTTTGACACGATCACCACCGGTTTGCAGTGGAGCCTTTTATATCTGATCAAgtttccagacatccaggccaaAATCCTTCAGGAGATAGAAAGCCAGGTTGGTATGAACAGGTTACCACAGTTTAAAGACAAGCCAAACATGCCGTACGCAGTAGCTTTCATATATGAAGTGTTTCGTCATGCATCCTATATGCCTTTCACCATACCTCACTGCACCACTGATAACATAACACTAAATGGATACTTCATTCCCAAAGACACATGCGTGTTCATCAACCAATATCAAGTCAATCATGACGTGGATATTTGGGCTGATGCTGAGGCTTTCCGACCTGAACGTTTCCTCACCGTGTCTggccatttaaacaaaaacctgACTGAGAAGGTAATGATATTTGGCATTGGAATACGCCGCTGCCTCGGTGACAGCTTTGCCCGTCTGGAGATGTTTTTGTTCTTAACCACCCTGCTCCATCAGCTGCACATAGAGAATGTTCCGGGGCAGGAGCTTGACCTGAGCTCTACATTTGCCCTCACCATGAAGCCCAGGCCCTTCCGAATAAAAATCTCAACTCGTAACTAAGCTGTATTTCAGATATTACATGTACACTAAATGGACCACGTATAAAATGCACCTCAGAACGGTTGCTACAAAGCTAATATTGGGCATCACTGAACTGCTAAGCTAATTAACCACTACAGTCTTCATTTCTTATGTGGTCTGTTCGGCTCAGCTGTTACTTGAATATTTGTTGTGTACTCTAAAGCATGCCCCGTCATTATTTCTGATAATACATGATAGCTAAGCTTCAGTTACTGCTTGTATTTTTAGCACAGATATTTGAAGTATGATGGTTTAAGATGTTAAAGTTGTTTCCGTGACATTGAAGGTTTAAAGAGGTATGCCTTTTGAAAAGGTGCTTtctgttaaatgtaaatattataaaatgtaaatattataaaattactatTAAATGTATTCTCAAATTA

Function

symbol description
cyp1d1 Enables testosterone 6-beta-hydroxylase activity. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in several structures, including cardiovascular system; digestive system; hypochord; kidney; and nervous system.

NR:

description
PREDICTED: cytochrome P450 1A1-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240831.1 True 2070 mRNA 0.45 7 10319660 10324635
XM_043240832.1 False 2035 mRNA 0.45 7 10319685 10324635

Neighbor

gene id symbol gene type direction distance location
tmc2b tmc2b,LOC107744486,LOC108255389,LOC108434469,LOC103356627 coding upstream 1056 10309609 ~ 10318604 (+)
tmc1 tmc1,LOC107672717,LOC107738298,LOC107592401,LOC107599958,LOC107744426 coding upstream 12967 10297132 ~ 10306693 (+)
gda gda,LOC107673426,LOC107672768 coding upstream 37631 10276867 ~ 10282029 (+)
c5h9orf85 zgc:101016,LOC107599915,LOC107744485,LOC107673354,LOC103371459,LOC101078288 coding upstream 44463 10273023 ~ 10275197 (+)
LOC122346129 ela3l,LOC107592405,LOC107672799 coding upstream 219380 10096934 ~ 10100280 (+)
anxa1a LOC107744429,LOC107599917,LOC107673431,LOC107738289,LOC107592317,LOC107672753 coding downstream 12588 10337223 ~ 10341120 (+)
mfsd3 si:dkey-229d2.4,mfsd3,LOC107744428,LOC107672752,LOC107673419,LOC107599916,LOC107592373 coding downstream 17562 10342197 ~ 10361067 (+)
rorb rorb,LOC107744430,LOC107730723,LOC107599920,LOC107592316 coding downstream 84000 10408635 ~ 10433693 (+)
abca2 abca2,LOC107730718 coding downstream 145041 10469676 ~ 10524790 (+)
dph7 dph7,LOC107730721,LOC107672791,LOC107744432 coding downstream 202455 10527090 ~ 10531080 (+)
G34959 NA non-coding upstream 27799 10288424 ~ 10291861 (+)
G34956 LOC107672769,LOC107592318,LOC107599914,LOC107738291,LOC107673406 non-coding upstream 32287 10285767 ~ 10287373 (+)
G34957 abhd17b,LOC102776450,LOC107592319,LOC107672759 non-coding upstream 55219 10261612 ~ 10264441 (+)
G34941 NA non-coding upstream 213219 10102885 ~ 10106441 (+)
G34911 NA non-coding upstream 285705 10032439 ~ 10033955 (+)
G35040 NA non-coding downstream 1231 10325866 ~ 10326714 (+)
G35041 NA non-coding downstream 2396 10327031 ~ 10327461 (+)
G35042 NA non-coding downstream 5254 10329889 ~ 10330322 (+)
G35043 NA non-coding downstream 8584 10333219 ~ 10333808 (+)
G35081 NA non-coding downstream 222586 10547221 ~ 10547625 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other upstream 179927 10064217 ~ 10139733 (+)
si:ch211-102c2.4 NA other upstream 520302 9796381 ~ 9799358 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 1448142 8864202 ~ 8871518 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 2014214 8289720 ~ 8305446 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other upstream 2309061 8001578 ~ 8010599 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other downstream 392896 10717531 ~ 10736059 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 602188 10926823 ~ 10933753 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 721844 11046479 ~ 11064446 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other downstream 811588 11136223 ~ 11150225 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other downstream 942007 11266642 ~ 11303431 (+)

Expression


Co-expression Network