LOC122345061


Basic Information

Item Value
gene id LOC122345061
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7912092 ~ 7931348 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250969.1
CGGCGGCAGCTCACGttctcggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaaaagaaaaaccgCCGTAATAAAGAACTGCGCCAACCTAATTTCCGCGTCAGGAGGAGAACGAAACGactcgCAGCACATTACATCTGTGACGCAGTAGTCATTTCACAGGATGGTACCAGGGGATGCCGGTGCACCGTCTGCCAGGCTGCCTGACGGGAATACCAGATGAGAGAGGGAAAAGGGAAGGAGGTAGAAGAGAGGCTTGGTGTGATATCACTGCAGTCCTGAAGCCCCAAATGGCTGTAGTCCGGATGTTTTGAGGTTACCACCCCACTGCGGAGACTGCAGCGTTGCGAAGCTATCTCATGTGAACATCACAATTACACATCAAGCTCCTGCTCCAGGCATTAACATGAGTGTAATTTTAGCATCAATGAACCATCATCCGGTCTTTCCAAATGACACCTTGTACCAGTGTCAGAGCACCGTAGTTTCATCTACAGATCAGCTAGAGGCATCACAATGACATTTGTTTACAATGATAGTTATAGAAAAACCATAAGGAATGAttttcataaatgcataatagaAGCAGACGAAGTTATAAGATATAGAATTTACTCACCCTTCACCATAATGTATCTTTTTGTGACAAATACAGCAAAAGGAGttctttcattctttattttttgctggATGTTTGACCTGGTCTACGTCCACTTTTACTGCATGGAAAAAAGCAGCTTGCACATTCTACTAAATTCCTCCTTTTGTGTTCTCCATAAAGAAAATCATTACGGTAggtaaattgttatttttgggaaaactatccctttaagagaaGCTTGCTGAGTTAGAAATTGCACTTTCTACTGAAATCGTGGCACCGTAAACCAACGAGTGGGTGAAGTCAACTGAAATACACAGCTCAAGAACTTCACCTCAGCCTCCTTAATAGCAACAACGGATATCATTGCTTCTGAAAGCACTGAGCTTCCTTAAAAAGACAGATATAAACCtatgatgcataaaaaaatattgtcttcCGTACTGTATGAATTTGTGTGCGGTTATGAATCAAGCTCATGCGGTATAGCCCTCAAGTGCTTTAGGTCCAGGGAAGTATGGTGGcgttacacaacacacactagGGAGTCTGCAAATCAGAGGAAAAGTGAGGGAACGTGTAATTGTGAAAGAACAAGCAGAGCTCTGCAAGAAAATCTCCACCCACAGTTTTACCTTGAGCAGATAGGCATTTGTGGGTAGATGAGAAGAAAAGGTCAAGTAATGTTTCTGAACTTCATACTGGGTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250969.1 True 1320 lncRNA 0.43 3 7912092 7931348

Neighbor

gene id symbol gene type direction distance location
sh3glb2b sh3glb2b,LOC107748508,LOC107681863,LOC107664415,LOC107597332 coding upstream 208921 7683732 ~ 7703171 (+)
pip5kl1 pip5kl1,LOC107598405,LOC107681849,LOC107712381,LOC107587371,LOC107664401,LOC107748514 coding upstream 228808 7676059 ~ 7683284 (+)
fam102ab fam102a,fam102ab,LOC107681850,LOC107748511,LOC107664417 coding upstream 239638 7643129 ~ 7672454 (+)
pkn3 LOC107681845,LOC107737478,LOC107587363,LOC107597294,LOC107712357,LOC107664395 coding upstream 298204 7599502 ~ 7613888 (+)
coro1cb LOC107723343,LOC107597269,LOC107681860,LOC107587361,LOC107740952 coding upstream 320468 7581530 ~ 7591624 (+)
LOC122344894 cyb5d2,LOC107664515,LOC107712371,LOC107597422,LOC107664398 coding downstream 43735 7975083 ~ 7976638 (+)
spns2 spns2,LOC107677434,LOC107597455,LOC107722776,LOC107587355,LOC106602867 coding downstream 94392 8025740 ~ 8090672 (+)
ftr82 LOC107712362,LOC107664526,LOC107597500,LOC107677429,LOC107587354,LOC107722781 coding downstream 188841 8120189 ~ 8126047 (+)
ift22 ift22,LOC107597505,LOC107712360,LOC107664522,LOC107677430,LOC107722786,LOC107587352 coding downstream 196315 8127663 ~ 8128952 (+)
tcnba tcnl coding downstream 225542 8156890 ~ 8158237 (+)
G34075 LOC107664520,LOC107748505,LOC107597375,LOC107712354,LOC107664410 non-coding upstream 131168 7717973 ~ 7780924 (+)
LOC122345618 NA non-coding upstream 186269 7713614 ~ 7725823 (+)
G34071 NA non-coding upstream 200914 7710303 ~ 7711178 (+)
G34064 NA non-coding upstream 271360 7640376 ~ 7640732 (+)
G33903 LOC107723325,LOC107598017,LOC107740964,LOC107587450,LOC107681865,LOC107660777 non-coding upstream 429105 7464371 ~ 7482987 (+)
G34116 NA non-coding downstream 61804 7993152 ~ 7996158 (+)
G34163 NA non-coding downstream 197757 8129105 ~ 8131150 (+)
G34358 NA non-coding downstream 497135 8428483 ~ 8431274 (+)
G34383 NA non-coding downstream 515450 8446798 ~ 8447021 (+)
G34384 NA non-coding downstream 516504 8447852 ~ 8448278 (+)
p2rx1 p2rx1,LOC107598068,LOC107712377,LOC107664512,LOC107587372 other upstream 114124 7754074 ~ 7797968 (+)
dpm2 dpm2,LOC107664400,LOC107712384,LOC107681851,LOC107598396,LOC107587395 other upstream 237456 7672827 ~ 7674636 (+)
tmem119b LOC107681861,LOC107597286,LOC107587378,LOC107735096 other upstream 314572 7592963 ~ 7597520 (+)
svopb LOC107723362,LOC107681854,LOC107598053 other upstream 344829 7558940 ~ 7567263 (+)
G33890 myhc4,myhz2,ns:zf-e68,myhz1.1,myhz1.2,LOC107723326,LOC107660779,LOC108415768 other upstream 465876 7425705 ~ 7446216 (+)
spns3 spns3,LOC107597443,LOC107712368,LOC107664514,LOC107677447,LOC107722774,LOC107587440 other downstream 70230 8001578 ~ 8010599 (+)
snx19a snx19a,LOC107597619,LOC107681657 other downstream 358372 8289720 ~ 8305446 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other downstream 932854 8864202 ~ 8871518 (+)
si:ch211-102c2.4 NA other downstream 1865033 9796381 ~ 9799358 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other downstream 2132869 10064217 ~ 10139733 (+)

Expression


Co-expression Network