trnag-gcc_48


Basic Information

Item Value
gene id trnag-gcc_48
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 25999717 ~ 25999787 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1037
gcattggtggttcagtggtagaattctcgcctgccgtgcgggagacccgggttcgattcccggccgtagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1037 True 71 tRNA 0.62 1 25999717 25999787

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_47 NA coding downstream 5494 25994153 ~ 25994223 (-)
trnag-gcc_46 NA coding downstream 13393 25986254 ~ 25986324 (-)
trnag-gcc_45 NA coding downstream 19032 25980615 ~ 25980685 (-)
trnag-gcc_44 NA coding downstream 20825 25978822 ~ 25978892 (-)
trnag-gcc_43 NA coding downstream 22962 25976685 ~ 25976755 (-)
trnag-gcc_49 NA coding upstream 12631 26012418 ~ 26012488 (-)
trnag-gcc_50 NA coding upstream 21382 26021169 ~ 26021239 (-)
trnag-gcc_51 NA coding upstream 25817 26025604 ~ 26025673 (-)
trnag-gcc_52 NA coding upstream 28012 26027799 ~ 26027868 (-)
trnag-gcc_53 NA coding upstream 32408 26032195 ~ 26032266 (-)
G39574 NA non-coding downstream 216126 25782979 ~ 25783591 (-)
G39572 NA non-coding downstream 271247 25728237 ~ 25728470 (-)
G39514 NA non-coding downstream 416703 25582339 ~ 25583014 (-)
G39506 NA non-coding downstream 440499 25558875 ~ 25559218 (-)
G39503 NA non-coding downstream 442195 25557296 ~ 25557522 (-)
G39579 NA non-coding upstream 118687 26118474 ~ 26119083 (-)
G39585 NA non-coding upstream 153678 26153465 ~ 26153703 (-)
LOC122344941 NA non-coding upstream 372832 26372619 ~ 26373822 (-)
G39712 NA non-coding upstream 876803 26876590 ~ 26883175 (-)
G39738 LOC107705276,LOC107586737,LOC107671348,LOC107663665,LOC107721875 non-coding upstream 1082214 27082001 ~ 27084786 (-)
LOC122344921 NA other downstream 431031 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 717431 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 1241049 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 1251107 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 1405601 24587724 ~ 24594116 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 1100028 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 1383134 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 1886254 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 2256041 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 3324195 29323982 ~ 29326115 (-)

Expression


Co-expression Network