G28834


Basic Information

Item Value
gene id G28834
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8365695 ~ 8365921 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU32606
GGCAGTTTGCTGGTCTGGAGCCTTCAGGTGTGTGTTAACACAATGCCAAGGAGAAAAGACATCAGCGGTGATCTTAGAGAAGCAAGTGTTTCTGCCCATTAATCTGAGATGGGTTATACGGCCATTTCCAAACAATTTGAAGTCCATTATTCTACAGTAAGGAAGATTATTCACAAGTGGAAAACATTAAAGACAGTTGCCAATCTTCCCAGGAGAGAACGTCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32606 True 227 lncRNA 0.37 1 8365695 8365921

Neighbor

gene id symbol gene type direction distance location
CI01000004_08302613_08354790 FNDC3BA coding upstream 10900 8302613 ~ 8354795 (+)
CI01000004_08252556_08257067 NA coding upstream 107602 8252394 ~ 8258093 (+)
CI01000004_08243282_08245264 NA coding upstream 120326 8242979 ~ 8245369 (+)
CI01000004_08200962_08208539 PPP2R3A coding upstream 154991 8199371 ~ 8210704 (+)
CI01000004_08177656_08183324 PPP2R3A coding upstream 182100 8177565 ~ 8183595 (+)
CI01000004_08382042_08402126 PLD1A coding downstream 14551 8380472 ~ 8402514 (+)
CI01000004_08414451_08436256 NA coding downstream 48395 8414316 ~ 8439933 (+)
CI01000004_08458998_08503889 TNIK, TNIKA coding downstream 93077 8458998 ~ 8503992 (+)
CI01000004_08507941_08515797 SLC2A2 coding downstream 142020 8507941 ~ 8516308 (+)
CI01000004_08518587_08521540 EIF5A2, EIF5A.L, EIF5A coding downstream 152541 8518462 ~ 8521661 (+)
G28819 NA non-coding upstream 81598 8277202 ~ 8284097 (+)
G28801 NA non-coding upstream 331983 8028250 ~ 8033712 (+)
G28800 NA non-coding upstream 339797 8025491 ~ 8025898 (+)
G28797 NA non-coding upstream 381918 7983481 ~ 7983777 (+)
G28791 NA non-coding upstream 538013 7827368 ~ 7827682 (+)
G28835 NA non-coding downstream 2940 8368861 ~ 8369073 (+)
G28843 NA non-coding downstream 44805 8410726 ~ 8411220 (+)
G28848 NA non-coding downstream 104824 8470745 ~ 8471884 (+)
G28849 NA non-coding downstream 161524 8527445 ~ 8527675 (+)
G28855 NA non-coding downstream 188311 8554232 ~ 8554563 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 709312 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 1791274 6570771 ~ 6572667 (+)
G28302 NA other upstream 1863608 6470028 ~ 6502087 (+)
G28165 NA other upstream 2632694 5732589 ~ 5733001 (+)
G27805 NA other upstream 2991892 5372825 ~ 5373803 (+)
G28859 NA other downstream 233314 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 610517 8976254 ~ 8980984 (+)
G30797 NA other downstream 2131455 10497376 ~ 10497788 (+)
G31710 NA other downstream 3271330 11637251 ~ 11642400 (+)

Expression


Co-expression Network