G28835


Basic Information

Item Value
gene id G28835
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8368861 ~ 8369073 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU32607
CACCAAGGCAGTATTTCCACCCAATTTTAACTACTTAAGAGTTTTAGAGGTTTTTAAAGGTTTATAACACCCAAATACTACTTTCATTCTTGCAATTAAACCTGGTTGCTACGAGCTGAATGTTGAGTAATTATTGTGACTAACTAGTATAATATAATAACCCATCAAGTAAAATAAGGAATCATGGTATAGCTTTTCAGTCACTACATGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32607 True 213 lncRNA 0.32 1 8368861 8369073

Neighbor

gene id symbol gene type direction distance location
CI01000004_08302613_08354790 FNDC3BA coding upstream 14066 8302613 ~ 8354795 (+)
CI01000004_08252556_08257067 NA coding upstream 110768 8252394 ~ 8258093 (+)
CI01000004_08243282_08245264 NA coding upstream 123492 8242979 ~ 8245369 (+)
CI01000004_08200962_08208539 PPP2R3A coding upstream 158157 8199371 ~ 8210704 (+)
CI01000004_08177656_08183324 PPP2R3A coding upstream 185266 8177565 ~ 8183595 (+)
CI01000004_08382042_08402126 PLD1A coding downstream 11399 8380472 ~ 8402514 (+)
CI01000004_08414451_08436256 NA coding downstream 45243 8414316 ~ 8439933 (+)
CI01000004_08458998_08503889 TNIK, TNIKA coding downstream 89925 8458998 ~ 8503992 (+)
CI01000004_08507941_08515797 SLC2A2 coding downstream 138868 8507941 ~ 8516308 (+)
CI01000004_08518587_08521540 EIF5A2, EIF5A.L, EIF5A coding downstream 149389 8518462 ~ 8521661 (+)
G28834 NA non-coding upstream 2940 8365695 ~ 8365921 (+)
G28819 NA non-coding upstream 84764 8277202 ~ 8284097 (+)
G28801 NA non-coding upstream 335149 8028250 ~ 8033712 (+)
G28800 NA non-coding upstream 342963 8025491 ~ 8025898 (+)
G28797 NA non-coding upstream 385084 7983481 ~ 7983777 (+)
G28843 NA non-coding downstream 41653 8410726 ~ 8411220 (+)
G28848 NA non-coding downstream 101672 8470745 ~ 8471884 (+)
G28849 NA non-coding downstream 158372 8527445 ~ 8527675 (+)
G28855 NA non-coding downstream 185159 8554232 ~ 8554563 (+)
G28858 NA non-coding downstream 226779 8595852 ~ 8597783 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 712478 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 1794440 6570771 ~ 6572667 (+)
G28302 NA other upstream 1866774 6470028 ~ 6502087 (+)
G28165 NA other upstream 2635860 5732589 ~ 5733001 (+)
G27805 NA other upstream 2995058 5372825 ~ 5373803 (+)
G28859 NA other downstream 230162 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 607365 8976254 ~ 8980984 (+)
G30797 NA other downstream 2128303 10497376 ~ 10497788 (+)
G31710 NA other downstream 3268178 11637251 ~ 11642400 (+)

Expression


Co-expression Network