G28909


Basic Information

Item Value
gene id G28909
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8682707 ~ 8683005 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU32688
GGTTTAGCTTTAATCTAGCCTACAGATGACTTCTGGTCATACAATGTTGTAGTAAAACAGGGATTGTAATTTAAACGTATTAATGGCAAGACACAAATGTTTTATTTAAATAAAATCAGAGATCCAGGCTATTTCATGATGATCATAAAACCATCAATAGCTAAAAATTGTGTTGTTTTAGCTTTTTTGCTGCTGCAAACACACTGTCACAGCAGCCAGAGAAGACAAACATATAAGAGTTAAGAGCCCAACTAATGGAAACACCAATCACCATTATGATGACTTCAAATGAAACAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32688 True 299 lncRNA 0.34 1 8682707 8683005

Neighbor

gene id symbol gene type direction distance location
CI01000004_08618566_08669147 NA coding upstream 13560 8618566 ~ 8669147 (+)
CI01000004_08573940_08586930 NA coding upstream 95537 8572741 ~ 8587170 (+)
CI01000004_08518587_08521540 EIF5A2, EIF5A.L, EIF5A coding upstream 161046 8518462 ~ 8521661 (+)
CI01000004_08507941_08515797 SLC2A2 coding upstream 166399 8507941 ~ 8516308 (+)
CI01000004_08458998_08503889 TNIK, TNIKA coding upstream 178715 8458998 ~ 8503992 (+)
CI01000004_08693419_08703448 PLPPR3A coding downstream 10414 8693419 ~ 8704156 (+)
CI01000004_08730011_08731219 PALM1B coding downstream 47006 8730011 ~ 8732509 (+)
CI01000004_08736175_08742487 PTBP1B, PTBP1, PTBP1A coding downstream 53170 8736175 ~ 8744387 (+)
CI01000004_08746864_08765484 NA coding downstream 63479 8746484 ~ 8765905 (+)
CI01000004_08806791_08812203 NA coding downstream 123786 8806791 ~ 8812562 (+)
G28905 NA non-coding upstream 8506 8673758 ~ 8674201 (+)
G28904 NA non-coding upstream 9244 8673221 ~ 8673463 (+)
G28872 NA non-coding upstream 66172 8616221 ~ 8616535 (+)
G28867 NA non-coding upstream 76122 8606314 ~ 8606585 (+)
G28863 NA non-coding upstream 78780 8603605 ~ 8603927 (+)
G28933 NA non-coding downstream 178230 8861235 ~ 8861910 (+)
G28947 NA non-coding downstream 199391 8882396 ~ 8882600 (+)
G28955 NA non-coding downstream 212457 8895462 ~ 8896242 (+)
G28959 NA non-coding downstream 223167 8906172 ~ 8906381 (+)
G28968 NA non-coding downstream 239478 8922483 ~ 8922685 (+)
G28859 NA other upstream 83104 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 231480 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 1026324 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 2108286 6570771 ~ 6572667 (+)
G28302 NA other upstream 2180620 6470028 ~ 6502087 (+)
CI01000004_08976512_08980033 TTPA other downstream 293433 8976254 ~ 8980984 (+)
G30797 NA other downstream 1814371 10497376 ~ 10497788 (+)
G31710 NA other downstream 2954246 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 2981768 11666900 ~ 11667659 (+)
G31865 NA other downstream 3509125 12192130 ~ 12197418 (+)

Expression


Co-expression Network