G62250 (dio1,LOC107700640)


Basic Information

Item Value
gene id G62250
gene name dio1,LOC107700640
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9030865 ~ 9038700 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU92203
TTGATCTTAAATTTTGGCGTGATGTAATCTTGTTGGTAAGTTTTTGCTACAGCACGAGCAAAGTTTGATGTCTGTGTCGTTCGTGTAGTGCTCGCGCGACGCCGCGTGGACCGGTCTAATCTTTTCGCGATGCACACCACAGTGGGATATGCGCTCAGAAAACTTTCTGTTTATGTATCAGCTGTGGCAATTCTTATATTTTCGTGCATATAACCCTGTTGAAACTCCTGTCACTCGGTTCCCCGGGACTGATGACGAGAAGTCGACGATGACTCAAAATCCCGCTGGGCCTGGAGGCGTTTTGAGGGCCGCGCTGCTCCGGGAACAGTCTTAAAGATGCTTGGTCTTTTGCAAACAACGTCGACATCAGCGTGCACAAAAACTTGGAGGAGAGACTGGCTGCAACCACATATaagttaattaattagtaaTGCATTACACCCAACACTGTTACTGATGCAGTCTTCTTCACAGGAAAACGTCCGCTGGTTCTCAGTTTTGGAAGCTGCACATGACCCCCATTTCTCTACAAGCTTGACGAGTTCAAACAACTGGTCAAGGACTTCAGTGATGTGGCAGATTTCCTCATTGTTTACCTTGCAGAAGCGCATGCAACTGATGCTTGGTCCTTTGCAAACAACGTCGACATCAGCGTGCACAAAAACTTGGAGGAGAGACTGGCTGCGGCCGGACCCTGGCCAAAGAAGACCCCCTTTGCCCCGTGGTAGTGGATGAGATGAGCAACATCACTGCCAGCAAATACGGAGCCCTGCCTGAGCGCCTCTATGTCATTCAGAGCGGGACAGTTATCTATCAGGGTGGCATCGGACCTTGGGGGTACAACCCTGAAGAGGTTCGAAACGTTCtggagaaaatgaattaaaagggaaaaaatggaAGTGTTCTGTCCAAGATTGCATTGCATCTGAAATTCTAGTGCCTGAACTCATTTTGTGAATCCTTGTGTTTGCTTGTGACAGGTACAGATTAAACCATCCGGTCTCTGTACCTTGATGTTTCAAATACATGGAATGTGAAATATAAGTAGATGACAGTATCCTTAGCGTATATTTTTGTATgccatttgtaattttttatttttgcagtttgttattaaacattgatttatattttctgctttaatgCAAATGCATAATTATCATACCAGCATCATATTCAAAGCCTGTGATGAATATCCAACAGCAGAGATTGTGAAGGGCATCTGTGCTTGTAAGATTTTTTTGGAGCTTGTGACTAAATGATGCTTACAGGGTTAAACTGTGTGAACTGTAAACTgattattttagtcatttgttctaaacatattttacagCACAGATTTCACTAAATATTCAGAGTTTTTCTATTCAGCTATTCAAATAAACAGTCATACGTGTCTCATAAGA
>TU92206
GGTTCCCCGGGACTGATGACGAGAAGTCGACGATGACTCAAAATCCCGCTGGGCCTGGAGGCGTTTTGAGGGCCGCGCTGCTCCGGGAACAGTCTTAAAGATGCTTGGTCTTTTGCAAACAACGTCGACATCAGCGTGCACAAAAACTTGGAGGAGAGACTGGCTGCAACCACATATaagttaattaattagtaaTGCATTACACCCAACACTGTTACTGATGCAGTCTTCTTCACAGGAAAACGTCCGCTGGTTCTCAGTTTTGGAAGCTGCACATGACCCCCATTTCTCTACAAGCTTGACGAGTTCAAACAACTGGTCAAGGACTTCAGTGATGTGGCAGATTTCCTCATTGTTTACCTTGCAGAAGCGCATGCAACTGATGCTTGGTCCTTTGCAAACAACGTCGACATCAGCGTGCACAAAAACTTGGAGGAGAGACTGGCTGCGGCCCGGACCCTGGCCAAAGAAGACCCCCTTTGCCCCGTGGTAGTGGATGAGATGAGCAACATCACTGCCAGCAAATACGGAGCCCTGCCTGAGCGCCTCTATGTCATTCAGAGCGGGAAAGTTATCTATCAGGGTGGCATCGGACCTTGGGGGTACAACCCTGAAGAGGTTCGAAACGTTCtggagaaaatgaattaaaagggaaaaaatggaAGTGTTCTGTCCAAGATTGCATTGCATCTGAAATTCTAGTGCCTGAACTCATTTTGTGAATCCTTGTGTTTGCTTGTGACAGGTACAGATTAAACCATCCGGTCTCTGTACCTTGATGTTTCAAATACATGGAATGTGAAATATAAGTAGATGACAGTATCCTTAGCGTATATTTTTGTATgccatttgtaattttttatttttgcagtttgttattaaacattgatttatattttctgctttaatgCAAATGCATAATTATCATACCAGCATCATATTCAAAGCCTGTGATGAATATCCAACAGCAGAGATTGTGAAGGGCATCTGTGCTTGTAAGATTTTTTTGGAGCTTGTGACTAAATGATGCTTACAGGGTTAAACTGTGTGAACTGTAAACTgattattttagtcatttgttctaaacatattttacagCACAGATTTCACTAAATATTCAGAGTTTTTCTATTCAGCTATTCAAATAAACAGTCATACGTGTCTCATAAGA

Function

symbol description
dio1 Predicted to enable thyroxine 5'-deiodinase activity. Acts upstream of or within regulation of neural retina development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including eye; female organism; heart; liver; and male organism. Orthologous to human DIO1 (iodothyronine deiodinase 1).

NR:

description
PREDICTED: type I iodothyronine deiodinase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92203 True 1406 lncRNA 0.43 4 9030865 9038700
TU92206 False 1171 lncRNA 0.42 4 9030865 9038464

Neighbor

gene id symbol gene type direction distance location
acot11b LOC107710923,LOC107585821,LOC107657911,LOC107548485,LOC107743846 coding downstream 12865 9009726 ~ 9018000 (-)
fpgt fpgt,LOC107699845,LOC107585822,LOC107548491 coding downstream 24862 9002221 ~ 9006003 (-)
tnni3k tnni3k,LOC107743849,LOC107550356,LOC107699804,LOC107657874,LOC107710912 coding downstream 28903 8991343 ~ 9001962 (-)
LOC122350776 LOC107599836,LOC107657909,LOC107710921,LOC107743853,LOC107548462 coding downstream 54925 8972793 ~ 8975940 (-)
st6galnac5b st6galnac5b,LOC107599835,LOC107657873,LOC107710911,LOC107743856,LOC107550326,LOC107700626 coding downstream 96114 8922693 ~ 8934751 (-)
rps8b LOC107743876,LOC107710907,LOC107579213 coding upstream 71691 9110391 ~ 9113350 (-)
elovl8b elovl8b,LOC107657928,LOC107585829,LOC107743843,LOC107699894,LOC108442366,LOC103026255 coding upstream 74787 9113487 ~ 9116378 (-)
mutyh mutyh,LOC107657919,LOC107585828,LOC107743842,LOC107750490,LOC103399401 coding upstream 77920 9116620 ~ 9121780 (-)
armh1 si:ch211-241d21.5,LOC107750499,LOC107699909,LOC107548505 coding upstream 83749 9122449 ~ 9127648 (-)
guk1b guk1b,LOC107585833,LOC107758268,LOC107657930,LOC107750510,LOC103024702,LOC108442369,LOC105895130,LOC106905753 coding upstream 89173 9127873 ~ 9131091 (-)
G62263 lrriq3,LOC107657910,LOC107585823,LOC107699824,LOC107548466 non-coding downstream 23760 9006834 ~ 9007105 (-)
G62262 NA non-coding downstream 24086 9006555 ~ 9006779 (-)
G62255 NA non-coding downstream 58092 8968289 ~ 8972773 (-)
LOC122351086 NA non-coding downstream 88610 8936078 ~ 8942255 (-)
G62241 NA non-coding downstream 109169 8921481 ~ 8921696 (-)
G62293 glis1,LOC102303521 non-coding upstream 44095 9082795 ~ 9085194 (-)
G62519 NA non-coding upstream 369714 9408414 ~ 9414439 (-)
G62525 NA non-coding upstream 487927 9526627 ~ 9526966 (-)
G62564 NA non-coding upstream 664259 9702959 ~ 9703191 (-)
G62565 NA non-coding upstream 664676 9703376 ~ 9703598 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 373579 8652304 ~ 8657286 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other downstream 380882 8647270 ~ 8649983 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 614312 8392345 ~ 8416553 (-)
LOC122350139 elavl4 other downstream 798091 8117008 ~ 8232774 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other downstream 1343303 7677496 ~ 7687562 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other upstream 218543 9257243 ~ 9262826 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other upstream 661694 9700394 ~ 9708621 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 915981 9954681 ~ 9969485 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other upstream 956847 9995547 ~ 10041769 (-)
smim24 smim24,LOC107580287 other upstream 1206496 10245196 ~ 10248156 (-)

Expression


Co-expression Network