G62817


Basic Information

Item Value
gene id G62817
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10325741 ~ 10327208 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU92967
aaaatgtaatgttttattttcaagagtTTGGCAATCGGACATACACAATGCGGTCAAAATCATCAGTGTAATTTAAACTCTTCATTTAATATTCACTAATAAAAGTATAGGGATGGATTAACAACAGGGTGATTCAGTAGAAAATGTGTTGGAGGTTAAATGTCTAAACACAAGAGATAAAATGAAAGGTAATATAAGAACATACCTGCAATTAATCAGCTATTAATGATTAGTGTTCTGTTTGGCACTAAAaacaatttacaatatatatatatatatcagtccAATTGTGGTAATAAATAACTATAGCAATAATACAATggcaaatatgaaaacaaacacactgaaaacaaatacacacatctGTATGGTTTAACTTTTCCCATTTcttgtgaatacattttttaaaaagtttaaatataacAAGCATATAACACTACTAATACTGTCTCATTTGAGTGTCTGCAGTGGTTTCAAAGTCAGAGAAGTACCAGAGTCACTTCATACAAAACAGAGGATTCCCTTAGAACTTTATCATATGTTCATTCAGAGGCCTATAAGGAAGTTTTAATGGCAGGAGTCAccaaactcggtcctggagggccagcGTCCTGCTGAGTTTAACTACAAtacacctgcctggaagtttcaaGTATACATAAGAAGAAGAATcgcttgttcaggtgtgtttgagtaGGGCTGGAGCTAAGCTATGCAGCATACTGGCCCTCGAGCAACACGTTTGGTGGCCACTGTTATACGGCATGTTTGACAACTGTAATGAACAAATGATATGTGCTATAGTGAATAAGCATGAGTATTAGTCGTTAGTCCACTTGAGGTGGAAAAAAACTACTGAAAAACGTACCAAAACCAACTTTGTGCGATTTCACTTTAGAGCTTCTGACAAAAAGTACTGAgaatatttaccttttttgacAAGGACGTAATTATCCTAAACCATCATACAAAACCAACTACAACAATGGCTATGAATATCAAGTACATGTTCACACttactgagttttttttttttattattaagtcttGATGCTTCTTTACTTTAGGTAGTTTAGAAAACTTCAGAAGTGGTCCAATGGTGTGGATCAATATTACCTATACgttaatttttttcctgtatttggAAACGCTGGGCTGCAGATGTGTTCTTCCAGAAGTCACAGTGATGCCATAAACAGCCACAGCTCTTCTATAGTAAAACCATATAAAATATCCGATCACAGTTATTGCTATCCTCTCCCCTACATCTTCTCGTCTACAGAGGTCTCAGTGTTTATAGAATAAGGCGATACAGGACCCAAAGGCCAAAGGTCAACCAGTGGCTTGTCCAGCTGAGCTGTGTCCATTTCTCAATGGTGTGGCTGGCCATACCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92967 True 1396 lncRNA 0.36 2 10325741 10327208

Neighbor

gene id symbol gene type direction distance location
cpt2 cpt2,LOC107668114,LOC107585892,LOC107731280,LOC107549124,LOC107695271 coding downstream 5368 10316425 ~ 10320373 (-)
tmco1 tmco1 coding downstream 25435 10298359 ~ 10300306 (-)
LOC122350862 aldh9a1,aldh9a1a.1,aldh9a1a.2,LOC107695268,LOC107668102,LOC108441636 coding downstream 28669 10291698 ~ 10297072 (-)
zgc:112962 LOC107695265,LOC107745796 coding downstream 34631 10284492 ~ 10291110 (-)
si:dkeyp-82a1.6 LOC107550035 coding downstream 41379 10280303 ~ 10284362 (-)
gls2a gls2a,LOC107731259,LOC107668075,LOC107549149,LOC107745788,LOC107695273,LOC107585893 coding upstream 2568 10329776 ~ 10338669 (-)
LOC122349990 gpr37l1b,LOC107731282,LOC107668115,LOC107585901,LOC107695275,LOC107549203,LOC107745785 coding upstream 160582 10487790 ~ 10491200 (-)
LOC122349964 ela2l,LOC107745782,LOC107695279,LOC107549241 coding upstream 199139 10526347 ~ 10528717 (-)
LOC122349966 NA coding upstream 202235 10529443 ~ 10533338 (-)
LOC122350349 nphp4,LOC107695281,LOC107550077 coding upstream 499221 10826429 ~ 10961990 (-)
G62805 NA non-coding downstream 23856 10301662 ~ 10301885 (-)
G62800 NA non-coding downstream 60980 10263818 ~ 10264761 (-)
G62795 NA non-coding downstream 72485 10250633 ~ 10253256 (-)
G62789 NA non-coding downstream 168548 10156975 ~ 10157193 (-)
G62788 NA non-coding downstream 172836 10152239 ~ 10152905 (-)
G62821 NA non-coding upstream 43125 10370333 ~ 10373331 (-)
G62824 cry1 non-coding upstream 54509 10381717 ~ 10443630 (-)
G62829 NA non-coding upstream 56512 10383720 ~ 10484599 (-)
G62831 NA non-coding upstream 104573 10431781 ~ 10434116 (-)
G62835 alas2,LOC107731137,LOC107555603,LOC107549233,LOC107745783,LOC107667982 non-coding upstream 193451 10520659 ~ 10522487 (-)
smim24 smim24,LOC107580287 other downstream 77585 10245196 ~ 10248156 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other downstream 283972 9995547 ~ 10041769 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other downstream 356256 9954681 ~ 9969485 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other downstream 617120 9700394 ~ 9708621 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other downstream 1062915 9257243 ~ 9262826 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other upstream 61975 10389183 ~ 10392043 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other upstream 113556 10440764 ~ 10480051 (-)
trnar-ccg_26 NA other upstream 213011 10540219 ~ 10540291 (-)
cep104 cep104,LOC107668088,LOC107745778 other upstream 646097 10973305 ~ 10990735 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other upstream 768932 11096140 ~ 11131238 (-)

Expression


Co-expression Network