G62835 (alas2,LOC107731137,LOC107555603,LOC107549233,LOC107745783,LOC107667982)


Basic Information

Item Value
gene id G62835
gene name alas2,LOC107731137,LOC107555603,LOC107549233,LOC107745783,LOC107667982
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10520659 ~ 10522487 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93028
TGGCCTTGACAACTCGGGGATGTCGGCTCATGCCTAGGTAATCATTACTGCACCATACAGACACCTGGGAGCCCAAGCGTCCAGGGATGGAATAGTCCTCAGCAAAAGGGAAAACCTCCGCAAAACGGTTCACCGTCTTAAAGATACGGTAGGTATGGTCATTCTTCTTTTCCACAATCTTCTGAGTGAAGAAGTCATCATACTTGAAACTGGGTGTggctgaattatttaaaaagcagatgGGCAATCATCAGCGAGGATGAAAGACCTATTAGTAGACACTAAAAGGTACATTTTCACgctttaaaagtacatataagTTCATAGGGTGTATTTTAGTAACTTTTATAGACCCAATGACAGTTTGGTATTTGGTATACATGGGGTGTATGGTTTATACTACTGTAAATCTTAAAGAAAAATGCAGTCAAACTCACTAAAGTTGTTTTCAAGAAGGTGTGTAGGACCAGGGGACTGATGACTTTGCAAGCCACTGAACAGCGAACTCATCCCAGAGTTATCTTGATGCTCAAGATTGGGCTGGACATCCTCCTGCACTTGCGGACTGGCTTTAACTAGTCCAATCTTAGAGGAAACAAAAGGACAGCTCTGGGACATGGAGATCGCCACCTGAGTGGCTGTGGTCGCCAACTGCCGCTTTGGCTCCTTATGAGGGAGGAGGCCTGAACACAATAAGCACATAAATACAAGATAAGATGAGTGGACTGGGTGGCTTTTACGGAGATCTGGCGGACAATGATCGGACATCGGTCAGCCAACCCAAAGTAGGCTGCCACATTCCTTAGAGAAGTTCCTGGAGTGGACTTCAAGAAGGGGCAGTGATGCAGAAAAGCAGACATGATTTTAACAGCTGCAAACAAAGGAAAAGACGGTCAGCGtggtaaaaattaaaaaaaaaataggcaacGTGAAAATAATTTTCCGTaatgtaacaacattttcaagCATTTATTAGAAAGACGCCcacataaattattcattagggtaaatatattaaacaattgaGTTCTTATAGAGACTCTGAAAGTGAGCCTAATC

Function

symbol description
alas2 Predicted to enable 5-aminolevulinate synthase activity. Acts upstream of or within heme biosynthetic process; hemoglobin biosynthetic process; and hemopoiesis. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Is expressed in erythroid progenitor cell; hematopoietic system; mesoderm; and pronephric duct. Used to study sideroblastic anemia. Human ortholog(s) of this gene implicated in cutaneous porphyria; erythropoietic protoporphyria; hemochromatosis; sideroblastic anemia; and sideroblastic anemia 1. Orthologous to human ALAS2 (5'-aminolevulinate synthase 2).

NR:

description
PREDICTED: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93028 True 1059 lncRNA 0.42 3 10520659 10522487

Neighbor

gene id symbol gene type direction distance location
LOC122349990 gpr37l1b,LOC107731282,LOC107668115,LOC107585901,LOC107695275,LOC107549203,LOC107745785 coding downstream 29459 10487790 ~ 10491200 (-)
gls2a gls2a,LOC107731259,LOC107668075,LOC107549149,LOC107745788,LOC107695273,LOC107585893 coding downstream 181990 10329776 ~ 10338669 (-)
cpt2 cpt2,LOC107668114,LOC107585892,LOC107731280,LOC107549124,LOC107695271 coding downstream 200286 10316425 ~ 10320373 (-)
tmco1 tmco1 coding downstream 220353 10298359 ~ 10300306 (-)
LOC122350862 aldh9a1,aldh9a1a.1,aldh9a1a.2,LOC107695268,LOC107668102,LOC108441636 coding downstream 223587 10291698 ~ 10297072 (-)
LOC122349964 ela2l,LOC107745782,LOC107695279,LOC107549241 coding upstream 3860 10526347 ~ 10528717 (-)
LOC122349966 NA coding upstream 6956 10529443 ~ 10533338 (-)
LOC122350349 nphp4,LOC107695281,LOC107550077 coding upstream 303942 10826429 ~ 10961990 (-)
c8h1orf174 cunh1orf174,LOC107731178,LOC107668010,LOC107745779,LOC107549271 coding upstream 442095 10964582 ~ 10968087 (-)
LOC122349916 cunh1orf174,LOC107731178,LOC107668010,LOC107745779,LOC107549271 coding upstream 612216 11134703 ~ 11137541 (-)
G62829 NA non-coding downstream 36060 10383720 ~ 10484599 (-)
G62824 cry1 non-coding downstream 77029 10381717 ~ 10443630 (-)
G62831 NA non-coding downstream 86543 10431781 ~ 10434116 (-)
G62821 NA non-coding downstream 147328 10370333 ~ 10373331 (-)
G62817 NA non-coding downstream 193451 10325741 ~ 10327208 (-)
G62861 LOC107549259,LOC107745781,LOC107668121,LOC107555602 non-coding upstream 173848 10696335 ~ 10698125 (-)
LOC122350960 NA non-coding upstream 232902 10755389 ~ 10799963 (-)
LOC122351000 NA non-coding upstream 296730 10819217 ~ 10825051 (-)
G62974 NA non-coding upstream 674666 11197153 ~ 11205373 (-)
G62977 NA non-coding upstream 679208 11201695 ~ 11210161 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other downstream 40608 10440764 ~ 10480051 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other downstream 128616 10389183 ~ 10392043 (-)
smim24 smim24,LOC107580287 other downstream 272503 10245196 ~ 10248156 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other downstream 478890 9995547 ~ 10041769 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other downstream 551174 9954681 ~ 9969485 (-)
trnar-ccg_26 NA other upstream 17732 10540219 ~ 10540291 (-)
cep104 cep104,LOC107668088,LOC107745778 other upstream 450818 10973305 ~ 10990735 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other upstream 573653 11096140 ~ 11131238 (-)
smim1 smim1,LOC107668050 other upstream 609183 11131670 ~ 11169473 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other upstream 761867 11284354 ~ 11345988 (-)

Expression


Co-expression Network