G62861 (LOC107549259,LOC107745781,LOC107668121,LOC107555602)


Basic Information

Item Value
gene id G62861
gene name LOC107549259,LOC107745781,LOC107668121,LOC107555602
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10696335 ~ 10698125 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93067
GTCGGACTCTTGCCTGTTTCCATTGTAGGAGGTCTTGTAGATGGGTGTGTGCTGGATCATCTCGTCCGTGTACACCGGGATGCCGGCCCGCACACACTCGTGCGAGCACTGTAAACTGTCGTTGTAGGCGGTGAAGATGTCCACCTTACTGGGCACGCGGGCGGGCGTGAAGTCGGTCAGGTTTTGACAGCTCTCCTCTTGCTGGTTGATCTTTCTCTGGTGGCTGCTGTGTCGGCCATTCCCGGACTGCGCACAACTACAAAAACACGCACCAAATTCACAAAGCCAACATAAAATCATACCTTGAACCGCTGTGTCTGTCCTACATTTAACATGGACTGGGGAAGCAGACACAGACAGATTTAGCTCTGTTCGAAACCTAGTGAGCCTTCTCGCTGCGCGTTTCCTAAATAGGTATTCTGATTGAAATGGAAGCTCATAAACGGCTGATCTGAAATGCTCTATGTAGGCAGCAGAGTGCAGTAGAATGGCTCGacaaaagtagtttttaatGAAGATCAATCGTAAATATGTGTAGTACACACATTTGGGTTAAAACAGTATGTTTTTAATGGTTACTTTTgggttatttattatttttattcatttgtgttaatataaatattaatgtcgTTTTGCAATGCAATTTTTCTGCAGTATCTTGAATGATGaactttttttagtattatttttaattaattaacattttgtttgtattgggtttttttttttacatttatagaaatatagaaataatgtgTAGTATTTTATGAATCTTGCATCATTAAACAACTCttaaatcatttattctttatttattttttaatcatttttaatttaattttcattatcgAATGAATACTGAATAATTATCATTTCTCTCACATCTGCAAAACAGTTagcttttaattatataaaaaatgttattgttattactaaCAGCATCttgcataataaacaaatgttatattattaatattatttgaactgcatttttttaaacaattttaagtATCTTGAATAATGCACAgttctctttatatatatatatatatatatatatatatatatataatacattttctgtatttgttgAGTCCGAGCatttttgtttctaaaaattattttaaaattaatttttccttatttgaatttttttttcgcaATAATTTTAGAATTGAATTAACTTTTACTTACTGTGAAAATAAAGCTCTCACATTCATGTAGCAATGCACTCAGGGATTCCTCACTCCTCACATTCCTCAAGATTCTTATAATTCCAAAAGAAGGTGTCATAGGtgccttaaaatgctgcctatGAAGGAAGCTCAACAGGTTTGGGAAAAAGCTATTGTGTACGAGTGTCCGGATTGCTTGGTGCAATAAAGGGTCACTGTCCACATTGACAGACAGAGTGATAGAAAAGGACAGATTGAAAAGATAATAAACAGACTGAGAGACAGGAACAGGGAGAGACAGACAAgaggaacacaaaaaaaatgcttaaagaaAGAATGTTTCCTACCAGTTTTTAAGGACTAGAGTAGTGATCAAGGCTGCAACGATCATGATGAGGGACACAGTGATGGTGATGATCTGGTGAACAGCCAGACCTaagaagaggggaaaaaaacaaagacagcaTAGTTATCAATGTCTCCATGGCAACTAATGTGAGCGCCAGTGCCTTTTGTAAGGTATTTGATTGCAATAACACTGATTCTGCATCTTAACTTGCACCGCTCTATCTGTTCCAGTGTAGCTTCTTC

Function

NR:

description
PREDICTED: adherens junction-associated protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93067 True 1769 lncRNA 0.35 2 10696335 10698125

Neighbor

gene id symbol gene type direction distance location
LOC122349966 NA coding downstream 162997 10529443 ~ 10533338 (-)
LOC122349964 ela2l,LOC107745782,LOC107695279,LOC107549241 coding downstream 167618 10526347 ~ 10528717 (-)
LOC122349990 gpr37l1b,LOC107731282,LOC107668115,LOC107585901,LOC107695275,LOC107549203,LOC107745785 coding downstream 205135 10487790 ~ 10491200 (-)
gls2a gls2a,LOC107731259,LOC107668075,LOC107549149,LOC107745788,LOC107695273,LOC107585893 coding downstream 357666 10329776 ~ 10338669 (-)
cpt2 cpt2,LOC107668114,LOC107585892,LOC107731280,LOC107549124,LOC107695271 coding downstream 375962 10316425 ~ 10320373 (-)
LOC122350349 nphp4,LOC107695281,LOC107550077 coding upstream 128304 10826429 ~ 10961990 (-)
c8h1orf174 cunh1orf174,LOC107731178,LOC107668010,LOC107745779,LOC107549271 coding upstream 266457 10964582 ~ 10968087 (-)
LOC122349916 cunh1orf174,LOC107731178,LOC107668010,LOC107745779,LOC107549271 coding upstream 436578 11134703 ~ 11137541 (-)
LOC122349917 cep104,LOC107668088,LOC107745778,LOC107695283 coding upstream 443058 11141183 ~ 11159286 (-)
lrif1 NA coding upstream 524915 11223040 ~ 11228121 (-)
G62835 alas2,LOC107731137,LOC107555603,LOC107549233,LOC107745783,LOC107667982 non-coding downstream 173848 10520659 ~ 10522487 (-)
G62829 NA non-coding downstream 211736 10383720 ~ 10484599 (-)
G62824 cry1 non-coding downstream 252705 10381717 ~ 10443630 (-)
G62831 NA non-coding downstream 262219 10431781 ~ 10434116 (-)
G62821 NA non-coding downstream 323004 10370333 ~ 10373331 (-)
LOC122350960 NA non-coding upstream 57264 10755389 ~ 10799963 (-)
LOC122351000 NA non-coding upstream 121092 10819217 ~ 10825051 (-)
G62974 NA non-coding upstream 499028 11197153 ~ 11205373 (-)
G62977 NA non-coding upstream 503570 11201695 ~ 11210161 (-)
G62992 NA non-coding upstream 578234 11276359 ~ 11276914 (-)
trnar-ccg_26 NA other downstream 156044 10540219 ~ 10540291 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other downstream 216284 10440764 ~ 10480051 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other downstream 304292 10389183 ~ 10392043 (-)
smim24 smim24,LOC107580287 other downstream 448179 10245196 ~ 10248156 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other downstream 654566 9995547 ~ 10041769 (-)
cep104 cep104,LOC107668088,LOC107745778 other upstream 275180 10973305 ~ 10990735 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other upstream 398015 11096140 ~ 11131238 (-)
smim1 smim1,LOC107668050 other upstream 433545 11131670 ~ 11169473 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other upstream 586229 11284354 ~ 11345988 (-)
G63095 NA other upstream 864153 11562278 ~ 11615925 (-)

Expression


Co-expression Network