G30172


Basic Information

Item Value
gene id G30172
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 9423645 ~ 9423845 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU34148
TTGGCACAAAAAAAGTATTCTTGTCGCTTTATAATATTAAGATAGAACCACTGTACTTACATGAACTGTTTCAAATATGTTTTAGTACCTTTATGGATCTTGAGAGTTTCAATGGCTTTGCTCTCAATAGAGGCCTCACTGAGCCATCGGATTTCATCAACAATATCTTAATTTGTGTTCCGAAGATGAACGAAGGTCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34148 True 201 lncRNA 0.35 1 9423645 9423845

Neighbor

gene id symbol gene type direction distance location
CI01000004_09383327_09385444 ELOVL8A coding upstream 38151 9383327 ~ 9385494 (+)
CI01000004_09378220_09381425 NA coding upstream 41822 9377804 ~ 9381823 (+)
CI01000004_09371639_09375356 NA coding upstream 47640 9371639 ~ 9376005 (+)
CI01000004_09340611_09363638 TESK2 coding upstream 59391 9339540 ~ 9364254 (+)
CI01000004_09224465_09224950 NA coding upstream 198689 9222479 ~ 9224956 (+)
CI01000004_09429758_09474615 ZSWIM5 coding downstream 5913 9429758 ~ 9474615 (+)
CI01000004_09524214_09525580 TMEM68 coding downstream 100369 9524214 ~ 9525580 (+)
CI01000004_09526514_09528258 TMEM68 coding downstream 102669 9526514 ~ 9528313 (+)
CI01000004_09533613_09534019 NA coding downstream 109396 9533241 ~ 9534363 (+)
CI01000004_09623579_09626179 BUC coding downstream 199734 9623579 ~ 9626601 (+)
G30169 NA non-coding upstream 4885 9418545 ~ 9418760 (+)
G30163 NA non-coding upstream 11084 9412229 ~ 9412561 (+)
G30111 NA non-coding upstream 96941 9323558 ~ 9326704 (+)
G30131 NA non-coding upstream 112824 9310597 ~ 9310821 (+)
G30130 NA non-coding upstream 113084 9310359 ~ 9310561 (+)
G30177 NA non-coding downstream 2270 9426115 ~ 9426347 (+)
G30196 NA non-coding downstream 191912 9615757 ~ 9616188 (+)
G30190 NA non-coding downstream 192802 9616647 ~ 9617267 (+)
G30243 NA non-coding downstream 256741 9680586 ~ 9680809 (+)
G30240 NA non-coding downstream 278980 9702825 ~ 9706274 (+)
CI01000004_08976512_08980033 TTPA other upstream 442661 8976254 ~ 8980984 (+)
G28859 NA other upstream 824042 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 972418 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 1767262 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 2849224 6570771 ~ 6572667 (+)
G30797 NA other downstream 1073531 10497376 ~ 10497788 (+)
G31710 NA other downstream 2213406 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 2240928 11666900 ~ 11667659 (+)
G31865 NA other downstream 2768285 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 3218909 12646838 ~ 12652570 (+)

Expression


Co-expression Network