Gene
RNA
| Item | Value |
|---|---|
| gene id | G30196 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 9615757 ~ 9616188 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU34173 | True | 301 | lncRNA | 0.45 | 2 | 9615757 | 9616188 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_09533613_09534019 | NA | coding | upstream | 81394 | 9533241 ~ 9534363 (+) |
| CI01000004_09526514_09528258 | TMEM68 | coding | upstream | 87444 | 9526514 ~ 9528313 (+) |
| CI01000004_09524214_09525580 | TMEM68 | coding | upstream | 90177 | 9524214 ~ 9525580 (+) |
| CI01000004_09429758_09474615 | ZSWIM5 | coding | upstream | 141142 | 9429758 ~ 9474615 (+) |
| CI01000004_09383327_09385444 | ELOVL8A | coding | upstream | 230263 | 9383327 ~ 9385494 (+) |
| CI01000004_09623579_09626179 | BUC | coding | downstream | 7391 | 9623579 ~ 9626601 (+) |
| CI01000004_09627968_09635256 | RNF152 | coding | downstream | 11780 | 9627968 ~ 9635801 (+) |
| CI01000004_09684489_09685469 | MC4R | coding | downstream | 68301 | 9684489 ~ 9686012 (+) |
| CI01000004_09980195_09995816 | CDH10A | coding | downstream | 364007 | 9980195 ~ 9995893 (+) |
| CI01000004_10058538_10090881 | CDH12A | coding | downstream | 442350 | 10058538 ~ 10091049 (+) |
| G30177 | NA | non-coding | upstream | 189410 | 9426115 ~ 9426347 (+) |
| G30172 | NA | non-coding | upstream | 191912 | 9423645 ~ 9423845 (+) |
| G30169 | NA | non-coding | upstream | 196997 | 9418545 ~ 9418760 (+) |
| G30163 | NA | non-coding | upstream | 203196 | 9412229 ~ 9412561 (+) |
| G30111 | NA | non-coding | upstream | 289053 | 9323558 ~ 9326704 (+) |
| G30190 | NA | non-coding | downstream | 459 | 9616647 ~ 9617267 (+) |
| G30243 | NA | non-coding | downstream | 64398 | 9680586 ~ 9680809 (+) |
| G30240 | NA | non-coding | downstream | 86637 | 9702825 ~ 9706274 (+) |
| G30395 | NA | non-coding | downstream | 143631 | 9759819 ~ 9763294 (+) |
| G30447 | NA | non-coding | downstream | 199623 | 9815811 ~ 9816085 (+) |
| CI01000004_08976512_08980033 | TTPA | other | upstream | 634773 | 8976254 ~ 8980984 (+) |
| G28859 | NA | other | upstream | 1016154 | 8599235 ~ 8599603 (+) |
| CI01000004_08414451_08436256 | NA | other | upstream | 1164530 | 8414316 ~ 8439933 (+) |
| CI01000004_07654234_07655677 | MRPL34 | other | upstream | 1959374 | 7654234 ~ 7656383 (+) |
| CI01000004_06571261_06572539 | SEP15 | other | upstream | 3041336 | 6570771 ~ 6572667 (+) |
| G30797 | NA | other | downstream | 881188 | 10497376 ~ 10497788 (+) |
| G31710 | NA | other | downstream | 2021063 | 11637251 ~ 11642400 (+) |
| CI01000004_11666900_11667179 | NA | other | downstream | 2048585 | 11666900 ~ 11667659 (+) |
| G31865 | NA | other | downstream | 2575942 | 12192130 ~ 12197418 (+) |
| CI01000004_12646972_12652534 | NA | other | downstream | 3026566 | 12646838 ~ 12652570 (+) |
