LOC122349966



Basic Information


Item Value
gene id LOC122349966
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10529443 ~ 10533338 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043246122.1
TATTAAGGTCAAAGTGCACCGGAGAAGTACTTTTTCGGGCAAGTTTTTTCCTAAAGCAATCATTCATTTCTAAAGACGAATTGAGAGTGAATTTGCTTGTATATAAACACGATGAAGCCTGTGCTTATGGCTGTTCTGGTTGTTGGAGcCTACGGTTGTGGGCTTCCCACCTACCCTCCTGTCCTATCAAAGGTCTATGGGGGTGTAGATGCACTTCCACACAGCTGGCCCTGGCAGATCTCCCTCCAGTACATGCACAGTGGAAGCTGGTACCACATGTGTGGTGGCACCCTCATTTCCGATGAGTGGGTTTTGATTGCTGCTCACTGTATTAGCAGTTCCAGGAGTTACAGAGTGTATCTGGGAAAACATAACCTGTATATGCTAGAGAGTGGATCTATCGCCATCTCCCCTAGCAAGATAATTATCCATCCCGCATGGAATTCTAACTCTATACGTGATGACATCGCCCTGATCAAACTGCAGACTCCTGTGACCCTAAGTGGCACTATCAGCCCCGCATGTCTTCCACCGGATGGGTATATTCTGCCCCACAATGCCCCCTGCTATGTCACTGGTTGGGGATCTTTCTACATCAATGGACCCCCTCACGATATCCTGCAGCAGGCTCTGCTTCCTGTGGTGGATCACGCCACCTGCTCTAGGTCTGACTGGTGGGGCTCGAAGGTCACACAAAACATGGTCTGCGCTGGTGGAGATGGTGTTGTTGCTGGATGTACTGGTGACACTGGTGGCCCCCTAAATTGCGCAGGTAGCAGTGGTACTTGGGAAGTCCATGGTGTTTTAACCTATCAAAGTTCAATGAGCTGCCTGATAGGCAAGAAGCCCAACATTTTCACTCGTGTGAGCGCCTACATTGACTGGATCAGCAAGAGCATTGCCGGTTATTAAAATGCAAGCAGAAACGGGAGTTttctgtcatccatgtcttaCACAATAAAAACCAGTGCTGGGGTTCATTTGACCTacattccctttttttttagaCTGCTCAAAATATTGgttaaactgtacattttttttacgaAGATATTTCATATTAAGGGTCATGAATGTTCATGGAAAGTTTTAacacataaatgtgttttagaaaGGCTATACAAAAATTGTTACAACTTTTATCGGAATTGGTTTTCATgcaatttgccaaaaaaaaagcttgtcaaATGCTAAAATATGAAACACATAAGAATTTCAAGACTTGTTTtaacttcactttttttctacttttacagttctaaaaacacttttacaaaaatctaagtttatgtgtgtgtctgtgcaactaattttgaaaataaatatgtgagaCCAAATTGATCCACAACTCCACAGAATACATAACATAATTTACAAGCTACAATAGAGTTTTTGTGTTCTAACAtgaattttttgtatttttcacaaaCTGAGTAGAAACCAGGTCAGTTTGGCCCCCAGCAGAgaagtattataaataaatggttCAAATGCA
>XM_043246124.1
TATTAAGGTCAAAGTGCACCGGAGAAGTACTTTTTCGGGCAAGTTTTTTCCTAAAGCAATCATTCATTTCTAAAGACGAATTGAGAGTGAATTTGCTTGTATATAAACACGATGAAGCCTGTGCTTATGGCTGTTCTGGTTGTTGGAGcCTACGGTTGTGGGCTTCCCACCTACCCTCCTGTCCTATCAAAGGTCTATGGGGGTGTAGATGCACTTCCACACAGCTGGCCCTGGCAGATCTCCCTCCAGTACATGCACAGTGGAAGCTGGTACCACATGTGTGGTGGCACCCTCATTTCCGATGAGTGGGTTTTGATTGCTGCTCACTGTATTAGTTCCAGGAGTTACAGAGTGTATCTGGGAAAACATAACCTGTATATGCTAGAGAGTGGATCTATCGCCATCTCCCCTAGCAAGATAATTATCCATCCCGCATGGAATTCTAACTCTATACGTGATGACATCGCCCTGATCAAACTGCAGACTCCTGTGACCCTAAGTGGCACTATCAGCCCCGCATGTCTTCCACCGGATGGGTATATTCTGCCCCACAATGCCCCCTGCTATGTCACTGGTTGGGGATCTTTCTACATCAATGGACCCCCTCACGATATCCTGCAGCAGGCTCTGCTTCCTGTGGTGGATCACGCCACCTGCTCTAGGTCTGACTGGTGGGGCTCGAAGGTCACACAAAACATGGTCTGCGCTGGTGGAGATGGTGTTGTTGCTGGATGTACTGGTGACACTGGTGGCCCCCTAAATTGCGCAGGTAGCAGTGGTACTTGGGAAGTCCATGGTGTTTTAACCTATCAAAGTTCAATGAGCTGCCTGATAGGCAAGAAGCCCAACATTTTCACTCGTGTGAGCGCCTACATTGACTGGATCAGCAAGAGCATTGCCGGTTATTAAAATGCAAGCAGAAACGGGAGTTttctgtcatccatgtcttaCACAATAAAAACCAGTGCTGGGGTTCATTTGACCTacattccctttttttttagaCTGCTCAAAATATTGgttaaactgtacattttttttacgaAGATATTTCATATTAAGGGTCATGAATGTTCATGGAAAGTTTTAacacataaatgtgttttagaaaGGCTATACAAAAATTGTTACAACTTTTATCGGAATTGGTTTTCATgcaatttgccaaaaaaaaagcttgtcaaATGCTAAAATATGAAACACATAAGAATTTCAAGACTTGTTTtaacttcactttttttctacttttacagttctaaaaacacttttacaaaaatctaagtttatgtgtgtgtctgtgcaactaattttgaaaataaatatgtgagaCCAAATTGATCCACAACTCCACAGAATACATAACATAATTTACAAGCTACAATAGAGTTTTTGTGTTCTAACAtgaattttttgtatttttcacaaaCTGAGTAGAAACCAGGTCAGTTTGGCCCCCAGCAGAgaagtattataaataaatggttCAAATGCA

Function


GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043246122.1 True 1495 mRNA 0.42 8 10529443 10533338
XM_043246124.1 False 1492 mRNA 0.42 8 10529443 10533338

Neighbor


gene id symbol gene type direction distance location
LOC122349964 ela2l,LOC107745782,LOC107695279,LOC107549241 coding downstream 726 10526347 ~ 10528717 (-)
LOC122349990 gpr37l1b,LOC107731282,LOC107668115,LOC107585901,LOC107695275,LOC107549203,LOC107745785 coding downstream 38243 10487790 ~ 10491200 (-)
gls2a gls2a,LOC107731259,LOC107668075,LOC107549149,LOC107745788,LOC107695273,LOC107585893 coding downstream 190774 10329776 ~ 10338669 (-)
cpt2 cpt2,LOC107668114,LOC107585892,LOC107731280,LOC107549124,LOC107695271 coding downstream 209070 10316425 ~ 10320373 (-)
tmco1 tmco1 coding downstream 229137 10298359 ~ 10300306 (-)
LOC122350349 nphp4,LOC107695281,LOC107550077 coding upstream 293091 10826429 ~ 10961990 (-)
c8h1orf174 cunh1orf174,LOC107731178,LOC107668010,LOC107745779,LOC107549271 coding upstream 431244 10964582 ~ 10968087 (-)
LOC122349916 cunh1orf174,LOC107731178,LOC107668010,LOC107745779,LOC107549271 coding upstream 601365 11134703 ~ 11137541 (-)
LOC122349917 cep104,LOC107668088,LOC107745778,LOC107695283 coding upstream 607845 11141183 ~ 11159286 (-)
lrif1 NA coding upstream 689702 11223040 ~ 11228121 (-)
G62835 alas2,LOC107731137,LOC107555603,LOC107549233,LOC107745783,LOC107667982 non-coding downstream 6956 10520659 ~ 10522487 (-)
G62829 NA non-coding downstream 44844 10383720 ~ 10484599 (-)
G62824 cry1 non-coding downstream 85813 10381717 ~ 10443630 (-)
G62831 NA non-coding downstream 95327 10431781 ~ 10434116 (-)
G62821 NA non-coding downstream 156112 10370333 ~ 10373331 (-)
G62861 LOC107549259,LOC107745781,LOC107668121,LOC107555602 non-coding upstream 162997 10696335 ~ 10698125 (-)
LOC122350960 NA non-coding upstream 222051 10755389 ~ 10799963 (-)
LOC122351000 NA non-coding upstream 285879 10819217 ~ 10825051 (-)
G62974 NA non-coding upstream 663815 11197153 ~ 11205373 (-)
G62977 NA non-coding upstream 668357 11201695 ~ 11210161 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other downstream 49392 10440764 ~ 10480051 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other downstream 137400 10389183 ~ 10392043 (-)
smim24 smim24,LOC107580287 other downstream 281287 10245196 ~ 10248156 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other downstream 487674 9995547 ~ 10041769 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other downstream 559958 9954681 ~ 9969485 (-)
trnar-ccg_26 NA other upstream 6881 10540219 ~ 10540291 (-)
cep104 cep104,LOC107668088,LOC107745778 other upstream 439967 10973305 ~ 10990735 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other upstream 562802 11096140 ~ 11131238 (-)
smim1 smim1,LOC107668050 other upstream 598332 11131670 ~ 11169473 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other upstream 751016 11284354 ~ 11345988 (-)

Expression



Co-expression Network