G30515


Basic Information

Item Value
gene id G30515
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 9906238 ~ 9906546 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU34511
ATCTTCTTCTGGCTAACACCTAACAAGAGTCTTTATAGAATAAAGATTTTGTAAAAGTTGTGAAAATTGTTCTTGAACGCATCCACTAAATAAACTATTCAATTAAACTGGATTATTTGTTTTAATTTTAGGATAATTAAACTTAATGGTTTTGGACAAAATTAAGAATGTTAACCTGGTTCAACTGAATGACATTGAGTTAACCTTATGTAACAAATTTAAGTTAACGGAAATAAATAATGTTAATTAAATGCAACATAACCAAATTACGTGGAACCTGTTGACATAAAAAAATTAAGTAAATCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34511 True 309 lncRNA 0.27 1 9906238 9906546

Neighbor

gene id symbol gene type direction distance location
CI01000004_09684489_09685469 MC4R coding upstream 220226 9684489 ~ 9686012 (+)
CI01000004_09627968_09635256 RNF152 coding upstream 270437 9627968 ~ 9635801 (+)
CI01000004_09623579_09626179 BUC coding upstream 279637 9623579 ~ 9626601 (+)
CI01000004_09533613_09534019 NA coding upstream 371875 9533241 ~ 9534363 (+)
CI01000004_09526514_09528258 TMEM68 coding upstream 377925 9526514 ~ 9528313 (+)
CI01000004_09980195_09995816 CDH10A coding downstream 73649 9980195 ~ 9995893 (+)
CI01000004_10058538_10090881 CDH12A coding downstream 151992 10058538 ~ 10091049 (+)
CI01000004_10169407_10212947 CDH18 coding downstream 262861 10169407 ~ 10213189 (+)
CI01000004_10376389_10423302 DLGAP1A, DLGAP1 coding downstream 469843 10376389 ~ 10423302 (+)
CI01000004_10434104_10435287 PTF1A coding downstream 525287 10431833 ~ 10435569 (+)
G30505 NA non-coding upstream 16482 9889529 ~ 9889756 (+)
G30447 NA non-coding upstream 90153 9815811 ~ 9816085 (+)
G30395 NA non-coding upstream 142944 9759819 ~ 9763294 (+)
G30240 NA non-coding upstream 199964 9702825 ~ 9706274 (+)
G30243 NA non-coding upstream 225429 9680586 ~ 9680809 (+)
G30681 NA non-coding downstream 301920 10208466 ~ 10344978 (+)
G30688 NA non-coding downstream 529684 10436230 ~ 10447737 (+)
G30780 NA non-coding downstream 547056 10453602 ~ 10454260 (+)
G30787 NA non-coding downstream 568204 10474750 ~ 10474951 (+)
CI01000004_08976512_08980033 TTPA other upstream 925254 8976254 ~ 8980984 (+)
G28859 NA other upstream 1306635 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 1455011 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 2249855 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 3331817 6570771 ~ 6572667 (+)
G30797 NA other downstream 590830 10497376 ~ 10497788 (+)
G31710 NA other downstream 1730705 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 1758227 11666900 ~ 11667659 (+)
G31865 NA other downstream 2285584 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 2736208 12646838 ~ 12652570 (+)

Expression


Co-expression Network