LOC122350067 (LOC107598986,LOC107725298)


Basic Information

Item Value
gene id LOC122350067
gene name LOC107598986,LOC107725298
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 6470699 ~ 6473683 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246261.1
AAGAACATGAAGTCGCCATCAGCACCGGGTTACTCAAGAGAACCGAGGAACCCCTCCAGTGAGTTTCATAATTAGGTTGTGTAAGGGCACGTTACGTATGAGGGCTTTAGAAGCCAGCGGGGCTACAAATGCAGTTCCTTGCCGCTCTGAAAACATTGATTTAACAGTCAACTCGGACTGTGAACCAACCATGAAAACGAACAGGGAGAAAGTAATTGGAAGTCAAGTCATTTCAGCCGAACTTGTGGCCGGACTGCTACTCAGCGTGGCGTATAGGATGTGTTCCAGTTTGGCTTTTTCCTCAGAGGGGGAAAGCGCGCAGTCTGAAGTAACGCGctcgcttgtgtgtgtgtgggtcgcTAGTAATATTAAGTTCATTTTCTTCAAAAGCAACAACCATCCACTTTCTCTTTCAGCTCATTCCGTCTCCAGGCTTGTTGCCTTCCTTTCACTGTTGGGAGTCCACAGAGAGGCACACATTCAGGGAACAGACCTCCTTCCAATGGTGGATATGGCGGTGTTCTTGTTCTTTCTTCTAAGCAGTTTGATTCTTCTGATCTTGGATCACAATCAGTTGAAAGGCTCTTTGAAACGATCTGAACTGCTCACTAAGCCCCAGAGGTTTTTCcttcaaattgatttttttgccaACTTTATTTGTGGACTCATGTGGTTGGTTTTTCCAGGATGGCTACATGGGTCACAGATTAATGGATCTGAGGATCATCTTTATCTCACTCGGGCATTCGGAGCCATGATGGTCGGAGACAGCTTTGTTTCTTTTACTACTCAGAAGCAAATGGGAACCTGCGAGGTATCTGTCTTCAGCAGCCGGGCTGTGGGAACTTCGGCGGTTGTCATCTTCATGATCCACACCCAGCTCGCCACATCTGCATGGAAAACCCCGCATCTCTGTTTGGGACTAGTAGGGGTCAGTCTGTGGGCTGGAAACTCCATCTTTGGCTACCTGAGCTCCAAAGACACAACCACACAGTCGGTGAATGATATATACTGGCGTGCTGTACAGAGAAAAGACGGAAGGCTTCATGCACAATAGATATTTTgtcatatgcatatatatattatgacatAATTGAGTGCATTTCTatgctttattatgtttttgacaaactatttatactgtaaatatagttgttttatgaatattaaatctgcattcttttgtaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC107598986

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246261.1 True 1189 mRNA 0.44 6 6470699 6473683

Neighbor

gene id symbol gene type direction distance location
LOC122351122 si:dkeyp-51b7.3,fibcd1,LOC107598982,LOC107665003,LOC107725318,LOC108438350,LOC107557183,LOC106585783 coding downstream 271419 6108592 ~ 6199280 (-)
traf1 traf1,LOC107599053,LOC107664983,LOC107709033,LOC107674383,LOC107557184 coding downstream 365423 6094051 ~ 6105276 (-)
phf19 phf19,LOC107599052,LOC107757290,LOC107674297,LOC107557185 coding downstream 379088 6063268 ~ 6091611 (-)
med27 med27,LOC107557205,LOC107665006,LOC107757301,LOC107725311 coding downstream 688428 5735521 ~ 5782271 (-)
rapgef1a rapgef1a,LOC107598978,LOC107725290,LOC107757300,LOC107664972,LOC107674295 coding downstream 753508 5693932 ~ 5717191 (-)
slc2a6 slc2a6,LOC107725299,LOC107599026 coding upstream 1073 6474756 ~ 6478894 (-)
dennd2da dennd2da,LOC107665000,LOC107720811,LOC107699011,LOC107557198 coding upstream 34174 6507857 ~ 6521964 (-)
spag17 spag17,LOC107598987,LOC107664984,LOC107664968 coding upstream 49270 6522953 ~ 6535787 (-)
zgc:194990 zgc:194990,LOC107699042,LOC107557196,LOC107758027 coding upstream 102642 6576325 ~ 6587081 (-)
si:ch73-61d6.3 si:ch73-61d6.3,LOC107725329,LOC107665009,LOC107758028,LOC107699027,LOC107598988 coding upstream 113526 6587209 ~ 6597575 (-)
G61582 NA non-coding downstream 2283 6467953 ~ 6468416 (-)
LOC122350799 LOC107725298,LOC107598986 non-coding downstream 195489 6273884 ~ 6275210 (-)
LOC122350056 NA non-coding downstream 265241 6204023 ~ 6205458 (-)
G61554 LOC102215562 non-coding downstream 445861 6023995 ~ 6024838 (-)
G61550 endog non-coding downstream 503577 5845963 ~ 5967122 (-)
G61629 NA non-coding upstream 77721 6551404 ~ 6551711 (-)
G61640 NA non-coding upstream 87767 6561450 ~ 6561918 (-)
G61663 NA non-coding upstream 183815 6657498 ~ 6658284 (-)
G61782 NA non-coding upstream 388345 6862028 ~ 6862954 (-)
G61860 cacna1e,LOC107707593,LOC107657843,LOC107599003 non-coding upstream 800907 7274590 ~ 7281165 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other downstream 27717 6423742 ~ 6442982 (-)
LOC122350596 LOC107557202,LOC107757303,LOC107725315,LOC107674335 other downstream 509593 5919961 ~ 5961106 (-)
G61513 NA other downstream 853035 5614329 ~ 5617664 (-)
c8h9orf116 LOC107757294 other downstream 861127 5605172 ~ 5609572 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other downstream 959756 5476213 ~ 5510943 (-)
LOC122350104 LOC107755295,LOC107665061,LOC107598999 other upstream 340788 6814471 ~ 6816747 (-)
xpr1a xpr1a,LOC107758009,LOC107755298,LOC107699288,LOC107665065,LOC107603171,LOC107599040 other upstream 401666 6875349 ~ 7056429 (-)
lhx4 lhx4,LOC107699337,LOC107550233,LOC107758007,LOC107599001,LOC107755297,LOC107665078 other upstream 617767 7091450 ~ 7102993 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other upstream 1203813 7677496 ~ 7687562 (-)
LOC122350139 elavl4 other upstream 1643325 8117008 ~ 8232774 (-)

Expression


Co-expression Network