si:dkey-70p6.1 (LOC107731205,LOC107668067,LOC107745762,LOC107549481,LOC107549992)


Basic Information

Item Value
gene id si:dkey-70p6.1
gene name LOC107731205,LOC107668067,LOC107745762,LOC107549481,LOC107549992
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11481644 ~ 11504032 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246486.1
ATGCCAATGGAGTGGGCACCGCGCTGTCATATGGTACTGTCGCCGATGCTCGAGACAGGATTGAGGCTCGAGGAGGCTCTGAGGCTCAACGGAGGCGGTCGTGACGAGGTCTTGCTATCACAACCGAGCCGTGACTTGGAATAACCCAGCTGTGCGTTTGCACCTTTCGCCTTATGAGCGCCGCGGCATGTACAGGAACAATGGGGATGGTCAGAGGTTGCGCTGAGGACGCCAGATGCCATACCGCACACATGTCCTCCCTAACATACGAATCCAGGCTCAACACAGGTTATTGATTATGCTTGCGGGGTCCGACCGGGAGCCAGACgtttcagcagcagcagcagcagcagcagcagagagagTGCAGCGAGGTGGATGCTGCGCGGCGACGCGCCCCCTGAATCCCTAAACTGAatctTGTGGACagtgtttgagagtgtgtgtgtgtgtgcttatgtgtgtgcgtgtgtgagggCGAGAGTGAAAGTGTGTATGTTAGCACTTCCACATGGCCTCCATGCAGGACGGGGTGAACTTCTCTGCTCATCCCTACGGCAAAGTACTGCTGCTGGGGGCCATCGCCGCCGCCTCAGCCTTCGTTGTCACCATCCTCATCGTCGTGCTATGTGTGGGCTGCCAGAGGAAAGGGAAGACACACAATGGCCCTGGAGAGGAGAGGAAGCACAGGCTCATGGACATGAGTATACTGCGACAGTCCAAGCTGACCTCCATCAAATCTTCTAAGAAGAACCGACCCGCCAGTATGGATCTGCTCCTACTTCCTAGCCGTCGATCAAACTCCGACCTGCGTTCTCAGGGCCGCCAGCTGCCTCAGATCCCCTCTGGTGAGGATGGGGAACACACGTATGCCGAGGTGGGCCGCCGCTCTTCTCCCACACGCGGGTCTGAGGATGCCCGCTATGGTGTCGGAGGTCGAGCTGGAGAGACGGACACACCCGCCCCACCAGCGGTCCCTGCTAATACCCCTGCTCCACCTGATCCCGACGGGGACTGCTTGGAGGGTGGGCTTCCAGAGCCAGAAACCCTCCCCCAAGTGGTAAACACACCTCCTCAACCGCAGGAAACAGTAGAGTACGCCTGCATCAGAAAGGTCCGGAGAGTGGACAAAGCAGCCCAGAAGAGGGACAATGGGACGGAGACCGAGGAGGGGCTCGGACAACAACGACACAGCAGTGGGGACCTTCGACATGCCCCACCCACTCACCCAGCCCCGCTTCCAACACACCCACACAGTCAGAAGATTCCTCGGAAAAATGTGGAGGCCTTCAATCTTCCAACTTTCCCTAAGGAGGCAGTGTTTATGGGAAATGGAGAACAGTACATATGGAAACCTCCGGAAGAAGATGACATCATCTTCCAGCACAAGCAGATGGGTATTCTGAGCTCTCATGCGGGAGAGAATATAGCAGCATCTGCAGCAGGGATCACAGAGATGTATTCGAAAGTCTGCAAACCGGGCAAAAAGAAGCGAGGCATGCCTGGCTCACCCACCGCCACGAGGGACATCAGCGGCTATAGGACCTTGGCTCGAGGTGACCGCGGTGAGCGTGACGGGGGTTTCAGCGTGGTAGTCAAACCCCAAACGTGGGCCCCACAGGAGGGCAAAGGCACGAGAGCGCCACCTGGCTGTATGGAGGACCACTGCTACGAAGCCATCAGCACTGAGGAAACAGACCTGGCTTACGAGACCATGGAGGGAGGGGGAGGCTGGAGGCGTGACAGGCCTCCACCCAATGCCAGTGCCACCTTGCGGCCCAAGCGGAAACGGCCCCAGCAACCCTTGCAACAACCGCCGCCCCCTCCACCCCAGCAGACCCCCAAACTGCAGCATCTCCCAGCCAAAACAATGCTGATTCCTGGGGAGAGCCTGTATGAGAGCATCCCTGACCTGAAGCAGGGCTCGGCCACCTCCAGCACAACCACCATCTTTACTTTTAATGACGGCATGGAGATGTATGTCACTGGCCTGTAGGCGGCGCTCTGAGGAAGGGAACTTTACTCTCTGGGGGCTTGAATGGGGACACGTAAGCGTGTCGTAACCCAATGGGATACGCGCATTGTGCCACtgctatatattttacatgGGTTCCAAGTATTAGTTGAGCATTAATTGAGTTTTGTATGTCTAGTTAAAGGTCAGTATTCTCGCAGCACAAAACGATAGAATGCTTACGTGAAAATCCTAACGAAATGATTTTGCCTATTCACATGCCTCCATAACGAAGAAGTAAAAATAGTCACCAGCCACGACATATCACAACAGACAACATATCACACCCGACAGTAGCATTCCTATAGAGGAAattcttgtttttgtcattaCATGTTGTAGTTAAGGACAGAGTGACCATCGGAATTGCGGGTCAAACTTGTATTTGATGCCTAGATAATCCCAAAGTAGAACAAACAGAGCACAAGTCTATTACAGAAGTAACTTGTTAAGAAGCACAGTTTAATTGTGTCCCCGTGGCCctctaaaaagaagaaaaaaattatttggcaGACGCCCTCAGCAAAGtactgttttacaaaaaattcTACACAGAAAttgaacattattagaaagccaATCAAAAGCTATTGCCAAgcaaaatatcatatattaacaaaataatttatttcatctGTTCATAGAAGAGTTGATCCTATTTTAAAATGGCTAAAAGCTATCTATTGCCTAAGAGCTTTAGGAAACACATGGCCCTATTTTTGTAAAGTCAAAGCCtctatttatgtaaaaaaaaaaattaatcataatttcaGAGCTAAAATAAAGATTCTAATTCGACTGGTCAAATAGATCCTGTACGCCAAGAAAGTATTTTCTTATTAAGCACAAATATCTCATGCTTAGCATGTTGTCTGTCTGAGACAGTGCCCTTCTGAAATTGAAGAGTACTAgatttaaaatctgttaaaagtAATAGATGGTAAATTGCAATTTTCAATAAAGCAAGATCATGGAGAGAATTAGCAAAAGCTCAGGGAcagtgaacaaaaatattaaataattgcacACAAAATGTTGACATATCTCACAAGAGACCCCCAATGtcttttcatgttattttttttgttttggtcataCATCAATTCAAACTGTCACATAAGTCACCACAGCACTTCAATGCGGTAAAgtaagtgtttttctttgtcaatACTGTTTATGCACTTTGCCTGATTAAAAAGATGCAtgctttcaagaaaaaaataccCTTGtaaagggataaaaaaaaagaaaagaaagaaaagtgaaacTAGCACTGTCCTGTGGTATCAGAGAATGGTTTATTTCTTGCTGTTGTCGGTGGATTGTTTGATTTATATGCCTTTTTCTTCATCTGAGAAAGAGCACAAAGTGAATCGCTTCAGGACTGAGGGAGACCAATGAGGACTCAAGGAGGACTCTCTAAATAAAAAACTGGACAGTTAGGAATATAACAGTTGGTCAGAAGAAATGTATCATAGACAATCCCTTTCCCCCATCATTTCAGAAGCAGTCAGGATGTCCATGTATGTCCAGATCAGATTGAATGGAATCACATACATTAgattgctgcaaaaaaaatctcctGTATGTTACACGAAAGTAAtaggagatttaaaaaaaaaaagaaaaaaaagaaaagaaataaaacaaatgagtaAGAGATTTAAAATTAGTGTATGTCGCCCTGTAAGTCTATGGGAGGGGGATTTGGGATTTTATGGCCAGATAGTGACAAGTTTCACCAGTGGACAATGTCAAAATATCTATGATTTGTGGACTATAGCCGCTGTCTCTTGGTGTCTTTGAATCTGATGCTAATGTGATCTGGATTAAATTATCCCAAATGGCTGGAGCACACAAAAAGGGGCTCAGGTCAACTAAATATAATCAAAGAGCTTGTCTAAGCCCTCGTTGCTATCAAATGTTGGTGCAATGTTGTAAATATGTTACAAGAAGAATTACAGAAGAAAATGGGGGGAGGGAATTTGCTCTTGGTGTTCCTGAAagtatttgtttctttctggTTGTCCTTTTGGAATGATTTTTCTGGTGAAAAATTATCTCAGCAGTATCTCTGTGAGTTTTGATTATGTGCTTTgggattttttgttttgttttgttttccacatcATTTTAGCTATACTGTGTATCTCAAAGACCAGTTGAGTTTAGTGTGGCAGCTAATGTTGTGCGTTTGCTTATCAAACAACAGGGTGGTGTGTATTAAAGCTGTGTAATTAAGTACTAATGTGCAAAagattgtaatgtttttatatcaaaatgaCTATTCATAAAATGTCGGGTCaagtttatacttttttaaataaagtagcacttcaaaaaacacaaa

Function

NR:

description
PREDICTED: basic salivary proline-rich protein 4 isoform X1

GO:

id name namespace
GO:0050852 T cell receptor signaling pathway biological_process
GO:0050853 B cell receptor signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246486.1 True 4364 mRNA 0.46 8 11481644 11504032

Neighbor

gene id symbol gene type direction distance location
emilin3a LOC107668027,LOC107731182,LOC107549958,LOC107550125,LOC107695222,LOC107745820 coding downstream 30198 11445273 ~ 11451446 (-)
magixa magixa,LOC107731248,LOC107668068,LOC107549995,LOC107695301 coding downstream 88973 11351304 ~ 11392671 (-)
porcnl LOC107731263,LOC107549961,LOC107668005,LOC107695296,LOC107550497,LOC107745836 coding downstream 225136 11250881 ~ 11256508 (-)
csde1 csde1,LOC107731193,LOC107549382,LOC107695294,LOC107549999,LOC107745769,LOC107668033 coding downstream 231061 11235474 ~ 11250583 (-)
apex2 apex2,LOC107668008,LOC107550000,LOC107695293,LOC107549375,LOC107745771 coding downstream 249641 11229329 ~ 11232003 (-)
ptk6a ptk6,LOC107731218,LOC107668051 coding upstream 65516 11569548 ~ 11575213 (-)
nol4la nol4la,LOC107549982,LOC107731219,LOC107745834,LOC107680239,LOC107550513,LOC107668103,LOC108412512,LOC103039117 coding upstream 75130 11579162 ~ 11615271 (-)
gpr173 gpr173,LOC107731146,LOC107678674,LOC107549585,LOC107549979,LOC107745752 coding upstream 171242 11675274 ~ 11683625 (-)
wasb LOC107731288,LOC107668059,LOC107745750,LOC107549977,LOC107678704,LOC107549603 coding upstream 239107 11743139 ~ 11747881 (-)
slc38a5b slc38a5b,slc38a5,LOC107668060,LOC107549975,LOC107731265,LOC107745748,LOC107678718,LOC107549617 coding upstream 245564 11749596 ~ 11764650 (-)
G63014 NA non-coding downstream 39648 11406954 ~ 11441996 (-)
G62992 NA non-coding downstream 204730 11276359 ~ 11276914 (-)
G62977 NA non-coding downstream 271483 11201695 ~ 11210161 (-)
G62974 NA non-coding downstream 276271 11197153 ~ 11205373 (-)
LOC122351000 NA non-coding downstream 656593 10819217 ~ 10825051 (-)
G63065 NA non-coding upstream 18990 11523022 ~ 11523638 (-)
G63071 NA non-coding upstream 30517 11534549 ~ 11534772 (-)
G63072 NA non-coding upstream 32011 11536043 ~ 11536517 (-)
G63073 NA non-coding upstream 33980 11538012 ~ 11538299 (-)
G63074 NA non-coding upstream 35479 11539511 ~ 11539833 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other downstream 135656 11284354 ~ 11345988 (-)
smim1 smim1,LOC107668050 other downstream 312171 11131670 ~ 11169473 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other downstream 350406 11096140 ~ 11131238 (-)
cep104 cep104,LOC107668088,LOC107745778 other downstream 490909 10973305 ~ 10990735 (-)
trnar-ccg_26 NA other downstream 941353 10540219 ~ 10540291 (-)
G63095 NA other upstream 58246 11562278 ~ 11615925 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other upstream 274239 11778271 ~ 11779251 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 547325 12051357 ~ 12054530 (-)
G63385 NA other upstream 759662 12263694 ~ 12264533 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other upstream 838128 12342160 ~ 12363104 (-)

Expression


Co-expression Network