zgc:110353 (zgc:110353,LOC107680259,LOC107711939,LOC107591867,LOC107668023,LOC107731165,LOC107550464,LOC107711928)


Basic Information

Item Value
gene id zgc:110353
gene name zgc:110353,LOC107680259,LOC107711939,LOC107591867,LOC107668023,LOC107731165,LOC107550464,LOC107711928
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12010488 ~ 12013150 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246544.1
TGAGCCCTCCTTCAGAAAAAAcaggtgtatttttaaaagacgAATATAAAACAGAAGAGATTATTACAGCTCCAGTCATCGTAGAAATAAGCTTACAGCAGCAATATAAACTTAGATTTAACCTGTTGTACCAGAAAATGACGATCAGGAAGTTCGCTATTGAGTACGACACCATAAATGATCGCAACACCTTTAGCAATCAGGATATTTTGGTGGGCAGAGTTATCGTGGACGTGtcaaagaaaaccaaaatcaATGCTCTGACTGTCCAGGCGAAAGGCAATGCAAATGTGTCATGGGATGAGACGCCAGCGGAAAGCACTGTGACGTACTGGGATACAGAAAAGTATTTCTCACTAACTCGGTCTGTCTTACCGGAGGATAACACAGATGgcTCTGTAACTCTTGTGGCTGGTAGACATGTCTTTGCTTTTGCCTTTCAGCTTCCCGACCAGGGCCTGCCTTCATCCTTTAAAGGTGCTCATGGTAAAATCCATTACCAACTTTTAGGCAAGTTGAGCAGGTCTATGCGTTCAGCCAGCGAAGCTAAAGCAAAGTTCACCTTCGTGGCCAAAGCTGATTATGATCATTCAACATTGATGGCACCTCAACATGGCAGTAAAGACAAGAATGTCAGTTTTTTTGCCTCTGGAAATATTTCAATGAATATTTTCTTGCCAAAGACAGGCTACCAGCAAGGTGAAAGACTAGTCGTCAACGGTGAGATTGTAAACAGCTCAACTCGAAAAATTGTGCCAAAGTACATTATCTACCAGAAACAAAGTTTCTTTGCTGGAGGCCAGAGAACTGTTCATACCACCCAGATACTGAAGGATAAGGGAGAACCTTTAAAATCCTCCACCAGACAGAATCTGTCCAAAGTATTAGTCCTTCCCACAGAAATCAGCACCACCATCCACAACTGCCGAATCCTCAAAGTCGAGTACAGACTACAGGTTATTTTGGATGTATCGTTCACTAAAAACCCCATGGTTAAACTCCCGTTTATCGTACTTCCTCTACATGATGGGACCTCAAAGAGTTGAAGGCTGGACTACACACAGACCTgtccaaaatgaatatttttaaattaatattagcaATGGGCTAGTTTTGTTTGCCCTTTTGATTTTACGCTTATTGTATCCTACtgtgaaaataatgtattttccAAAATAGGAAATCATATATGAAAAAGGGCAtatatttctcataattgccCAAAATAAAAACCCTTTCAAAATGTTCTCTACCTCATGCTGTTCcagacttttttcaaaaagaatattatatttcacagGAGAAAGAACGACATACAGGTTTGATATGAAATAACAGTAAACGATATCAACAatatcattaacattaaaatgaaggtAATCAgatttccttttaaataaatgtatttcagtgcTTCCGTCCATGCAAAAagattacaataatataaacataaatgcacATA

Function

symbol description
zgc:110353 Predicted to be involved in protein transport. Predicted to be active in cytoplasm and plasma membrane. Is expressed in neuromast.

NR:

description
PREDICTED: arrestin domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246544.1 True 1462 mRNA 0.39 6 12010488 12013150

Neighbor

gene id symbol gene type direction distance location
adora1b adora1b,LOC107550463,LOC107711940,LOC107668012,LOC107591868,LOC107731293,LOC107680252 coding downstream 27179 11977200 ~ 11983309 (-)
dclre1b LOC107731274,LOC107668110,LOC107550475,LOC107712006,LOC107678930 coding downstream 35659 11970741 ~ 11974829 (-)
lhfpl5b lhfpl5b,LOC107591869,LOC107745833,LOC107731128 coding downstream 119205 11883738 ~ 11891283 (-)
c8h1orf194 LOC107731283,LOC107668109,LOC107549965 coding downstream 167636 11841181 ~ 11842852 (-)
zgc:195245 zgc:195245,LOC107668117,LOC107549966,LOC107731284 coding downstream 169887 11838293 ~ 11840601 (-)
rbm15 rbm15,LOC107731203,LOC107680058 coding upstream 65089 12078239 ~ 12083038 (-)
alx3 alx3,LOC107680275,LOC107711935,LOC107731154,LOC107591866,LOC107668019 coding upstream 72769 12085919 ~ 12091662 (-)
kcnc4 kcnc4,LOC107731196,LOC107668031,LOC107711934,LOC107679013,LOC107591816 coding upstream 136837 12149987 ~ 12168140 (-)
hspa1b si:ch211-199o1.2,LOC107668030,LOC108442126,LOC104926754 coding upstream 155737 12168887 ~ 12171370 (-)
ahcyl1 ahcyl1,LOC107731197,LOC107668032,LOC107591817,LOC107679038 coding upstream 159039 12172189 ~ 12189485 (-)
G63304 LOC107549947,LOC107731153,LOC107668018,LOC107591857,LOC107745734 non-coding downstream 154426 11855745 ~ 11856062 (-)
G63254 LOC106565120 non-coding downstream 187244 11821284 ~ 11823244 (-)
G63134 si:dkey-16n15.6,LOC107667993,LOC107549944,LOC108442380,LOC105898899 non-coding downstream 343008 11667166 ~ 11667480 (-)
G63127 NA non-coding downstream 345714 11663435 ~ 11664774 (-)
G63120 NA non-coding downstream 358584 11648509 ~ 11651904 (-)
G63344 NA non-coding upstream 3576 12016726 ~ 12017351 (-)
G63347 NA non-coding upstream 6561 12019711 ~ 12019953 (-)
G63350 NA non-coding upstream 9365 12022515 ~ 12022753 (-)
G63321 NA non-coding upstream 91428 12104578 ~ 12139398 (-)
G63316 slc6a17,LOC107668054,LOC107731213,LOC107712000,LOC107678997 non-coding upstream 118341 12131491 ~ 12134728 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other downstream 231237 11778271 ~ 11779251 (-)
G63095 NA other downstream 394563 11562278 ~ 11615925 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other downstream 664500 11284354 ~ 11345988 (-)
smim1 smim1,LOC107668050 other downstream 841015 11131670 ~ 11169473 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other downstream 879250 11096140 ~ 11131238 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 38207 12051357 ~ 12054530 (-)
G63385 NA other upstream 250544 12263694 ~ 12264533 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other upstream 329010 12342160 ~ 12363104 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other upstream 476047 12489197 ~ 12504153 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other upstream 972504 12985654 ~ 13083372 (-)

Expression


Co-expression Network