zgc:112962 (LOC107695265,LOC107745796)


Basic Information

Item Value
gene id zgc:112962
gene name LOC107695265,LOC107745796
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10284492 ~ 10291110 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246949.1
AGCACCACCCGGAACAGTAGTGGCGCAGTCGTGCTAGGACGTGTGACTTGTCAGATAGGGCAAAATCCGAAATATTATCTATGAATGTTGTCAGCCAGGTCTGTTTTTGAGACTAGAGGGACAGGTTTCAGAGGTATTTGTTCTACGTGGCGACATTGCTTTTTAGCGAGCGCGTTTGTGCTTCATTTCAGGTCCATATCAAATGCACTACTGCAGAATAACACACTGAAAGAAAGTAGTTCAAATGGCAGACAAAGGCAACAGTGAGGATACGGGACAGCTTTCCTGTCAACCTTCTGACACTATGCAGCAAGGAACTGACCGTAGGTCTAACCCAGGACctaatacaaaagaaaaaaatgagagTATCAGTGAACCTGAGGAGCAACATAAAGGCCCGTCTGGGGATACTTCACCAGATATTAGAGCTAAAAAAAGAGATGAATCCATTCTTAATATCCAAAAGCCTAAAAAAGTAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGACAAGCAAGAAGACAAgcaagaagaaaagaaaaaagaaaagaaagaagaagaaaagaaaaaagaaaagaaagaagaagaaaagaaaaaagaaaagaaagaagaagaagaatctgaagaagaagaatatgaagaagaagaagaaaaaggaaaagaagatATGAAAAGGGATATAAATGAAGACCAGGCTCAAGATAGGAACATCCAATCACAGATCACTGCGCCAGGAAATAATAAAACATTTTGGATTTGTGCAGCCGGTGCCATTGTGTTAGCTGTGGTTTGTGCATTAATGTGTAGTCCTGACTCAACTCCACCTGTACAAAACGAGGTAAATGTGGTGGACATATTCAATCAGGAAATGAAAAATCTTAAGAATAGCTTTCCAAATCAGCATGCAGAGCTCTGGAGGAGGAGTCTTATTCATCTTCGGCGCcacctaaaaactaaaaacccCACCGAACCCGTCAGCCTGATTCTGACGTCTGATCACAGAGCTGAAAAGACACTTGGTTGCCTGGCCCAATGTTTGGCCCAAGCCTTTTCTACTGCTCTTAACTCTTCGTTTCTGCATATTAATGGAAAAGATAAAGCATCACAAGACAGTGATCAGGTCAAGCTGGACATTGATAGAGAACTGAAAAAAGcctttgaggaaaaaaagtctGCTGCGGTGGTCCACCGTTTTGAGGAGCTCCCTCCTGGATCCACTCTCATCTTCTACCGTTACTGTGACCACGAGAATGCGGCTTATAAAAACGTCTTCCTGGCCTTTACTGTAATGCTTGATGCAGAAGTGGAAGTGCCATCCGATGTCAATCTAGGAAGAGTTGAGGAGATGGTTCAAGAGCACATAAAACACAAGTTTGTCTCCTCTGACAAGTCAGCAACGTTTAATCAAATGGACGTTGACAAACTAAGTGGACTCTGGAGCAGAATATCACATCTCATCTTGCCAGTGGCTGCAGAAGAGAAGATTGAGCAGCAGGGCTGCGGGGaatataataaagcattttaaagacactttttgcattttgcaaaaaaaatactacttcaAATATTTGActtaagcaaaaaatatatgtatatgggaATTTGTCGCTGTTTGGATGATAGGCCTCAATTTTCTTTGACACTAAACTACCACTTTGGAGATAAtgaattttataaaaacataaaatgaaggaagtttaccatttttatagttcttctttcttttcatgtAGATCTGTTTGCatctaaattatgttttaatttaaaaaagtaattttttttttttgatctgtACATTTGGATTTGGAGGTGAAAgtgttatatttgttatatgaTCGATTTTCTTTTCTACTTCAAAGCTTTATTAGAGAAAATAAACGTGCCTTAATAAATTTATCAGCTCTTCTTCCT
>XM_043246950.1
AGCACCACCCGGAACAGTAGTGGCGCAGTCGTGCTAGGACGTGTGACTTGTCAGATAGGGCAAAATCCGAAATATTATCTATGAATGTTGTCAGCCAGGTCTGTTTTTGAGACTAGAGGGACAGGTTTCAGAGGTCCATATCAAATGCACTACTGCAGAATAACACACTGAAAGAAAGTAGTTCAAATGGCAGACAAAGGCAACAGTGAGGATACGGGACAGCTTTCCTGTCAACCTTCTGACACTATGCAGCAAGGAACTGACCGTAGGTCTAACCCAGGACctaatacaaaagaaaaaaatgagagTATCAGTGAACCTGAGGAGCAACATAAAGGCCCGTCTGGGGATACTTCACCAGATATTAGAGCTAAAAAAAGAGATGAATCCATTCTTAATATCCAAAAGCCTAAAAAAGTAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGAAAAGCAAGAAGACAAGCAAGAAGACAAgcaagaagaaaagaaaaaagaaaagaaagaagaagaaaagaaaaaagaaaagaaagaagaagaaaagaaaaaagaaaagaaagaagaagaagaatctgaagaagaagaatatgaagaagaagaagaaaaaggaaaagaagatATGAAAAGGGATATAAATGAAGACCAGGCTCAAGATAGGAACATCCAATCACAGATCACTGCGCCAGGAAATAATAAAACATTTTGGATTTGTGCAGCCGGTGCCATTGTGTTAGCTGTGGTTTGTGCATTAATGTGTAGTCCTGACTCAACTCCACCTGTACAAAACGAGGTAAATGTGGTGGACATATTCAATCAGGAAATGAAAAATCTTAAGAATAGCTTTCCAAATCAGCATGCAGAGCTCTGGAGGAGGAGTCTTATTCATCTTCGGCGCcacctaaaaactaaaaacccCACCGAACCCGTCAGCCTGATTCTGACGTCTGATCACAGAGCTGAAAAGACACTTGGTTGCCTGGCCCAATGTTTGGCCCAAGCCTTTTCTACTGCTCTTAACTCTTCGTTTCTGCATATTAATGGAAAAGATAAAGCATCACAAGACAGTGATCAGGTCAAGCTGGACATTGATAGAGAACTGAAAAAAGcctttgaggaaaaaaagtctGCTGCGGTGGTCCACCGTTTTGAGGAGCTCCCTCCTGGATCCACTCTCATCTTCTACCGTTACTGTGACCACGAGAATGCGGCTTATAAAAACGTCTTCCTGGCCTTTACTGTAATGCTTGATGCAGAAGTGGAAGTGCCATCCGATGTCAATCTAGGAAGAGTTGAGGAGATGGTTCAAGAGCACATAAAACACAAGTTTGTCTCCTCTGACAAGTCAGCAACGTTTAATCAAATGGACGTTGACAAACTAAGTGGACTCTGGAGCAGAATATCACATCTCATCTTGCCAGTGGCTGCAGAAGAGAAGATTGAGCAGCAGGGCTGCGGGGaatataataaagcattttaaagacactttttgcattttgcaaaaaaaatactacttcaAATATTTGActtaagcaaaaaatatatgtatatgggaATTTGTCGCTGTTTGGATGATAGGCCTCAATTTTCTTTGACACTAAACTACCACTTTGGAGATAAtgaattttataaaaacataaaatgaaggaagtttaccatttttatagttcttctttcttttcatgtAGATCTGTTTGCatctaaattatgttttaatttaaaaaagtaattttttttttttgatctgtACATTTGGATTTGGAGGTGAAAgtgttatatttgttatatgaTCGATTTTCTTTTCTACTTCAAAGCTTTATTAGAGAAAATAAACGTGCCTTAATAAATTTATCAGCTCTTCTTCCT

Function

NR:

description
PREDICTED: torsin-1A-interacting protein 2-like isoform X3

GO: NA

KEGG:

id description
K23001 TOR1AIP; torsin-1A-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246949.1 True 1968 mRNA 0.38 6 10284492 10291110
XM_043246950.1 False 1910 mRNA 0.38 6 10284492 10291110

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-82a1.6 LOC107550035 coding downstream 130 10280303 ~ 10284362 (-)
haus5 LOC107731222,LOC107585885,LOC107745798,LOC107695262 coding downstream 12495 10264841 ~ 10271997 (-)
LOC122349939 LOC107731225,LOC107701761,LOC107585934,LOC107745801,LOC107550447,LOC100005423 coding downstream 25300 10257145 ~ 10259192 (-)
dohh dohh,LOC107745802,LOC107548993,LOC107585881,LOC107695215 coding downstream 27542 10253890 ~ 10256950 (-)
myo1f myo1f,LOC107750961,LOC107585872,LOC107548903,LOC107731286,LOC107695252,LOC108413823 coding downstream 289384 9979636 ~ 9995108 (-)
LOC122350862 aldh9a1,aldh9a1a.1,aldh9a1a.2,LOC107695268,LOC107668102,LOC108441636 coding upstream 588 10291698 ~ 10297072 (-)
tmco1 tmco1 coding upstream 7249 10298359 ~ 10300306 (-)
cpt2 cpt2,LOC107668114,LOC107585892,LOC107731280,LOC107549124,LOC107695271 coding upstream 25315 10316425 ~ 10320373 (-)
gls2a gls2a,LOC107731259,LOC107668075,LOC107549149,LOC107745788,LOC107695273,LOC107585893 coding upstream 38666 10329776 ~ 10338669 (-)
LOC122349990 gpr37l1b,LOC107731282,LOC107668115,LOC107585901,LOC107695275,LOC107549203,LOC107745785 coding upstream 196680 10487790 ~ 10491200 (-)
G62800 NA non-coding downstream 19731 10263818 ~ 10264761 (-)
G62795 NA non-coding downstream 31236 10250633 ~ 10253256 (-)
G62789 NA non-coding downstream 127299 10156975 ~ 10157193 (-)
G62788 NA non-coding downstream 131587 10152239 ~ 10152905 (-)
LOC122350767 NA non-coding downstream 133501 10127885 ~ 10150991 (-)
G62805 NA non-coding upstream 10552 10301662 ~ 10301885 (-)
G62817 NA non-coding upstream 34631 10325741 ~ 10327208 (-)
G62821 NA non-coding upstream 79223 10370333 ~ 10373331 (-)
G62824 cry1 non-coding upstream 90607 10381717 ~ 10443630 (-)
G62829 NA non-coding upstream 92610 10383720 ~ 10484599 (-)
smim24 smim24,LOC107580287 other downstream 36336 10245196 ~ 10248156 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other downstream 242723 9995547 ~ 10041769 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other downstream 315007 9954681 ~ 9969485 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other downstream 575871 9700394 ~ 9708621 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other downstream 1021666 9257243 ~ 9262826 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other upstream 98073 10389183 ~ 10392043 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other upstream 149654 10440764 ~ 10480051 (-)
trnar-ccg_26 NA other upstream 249109 10540219 ~ 10540291 (-)
cep104 cep104,LOC107668088,LOC107745778 other upstream 682195 10973305 ~ 10990735 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other upstream 805030 11096140 ~ 11131238 (-)

Expression


Co-expression Network