dennd2da (dennd2da,LOC107665000,LOC107720811,LOC107699011,LOC107557198)


Basic Information

Item Value
gene id dennd2da
gene name dennd2da,LOC107665000,LOC107720811,LOC107699011,LOC107557198
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 6507857 ~ 6521964 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247227.1
TCGTACaccaaaccaaacacacacacacacacacacacacacacgaaactGTACAGTGACTTATAAAGGACAAAGACAGTGAAAAGAATCACATGGTAGTGAGAGCTTGCCTACTTCTAGGTGGGTGAGGAGAAAGCAAATAGACGAAACTGGTTCAGCAGGTAAACCGGCATGAAACGGCTGTTGTGGACTGCTAACACGATGAAATAATAtggtaaatatttaatcaaaccGAAGATTTTCGACCTTCTCGACCTACAAACGGAGACACAAGAGAAAGTTTACATTGCGgtgacacaatgacatcatccaGGAAAACCTGGGCCTTCTCCTCTCTGCGTACAAAGTCCAGAGCATCGCTGGAGGAGGGGGAAAATTTCAGAAGAagattgttttcttcttttagaagTGATCGACGTGAACCAAGATCTCAAAGAGAAGAAGATGacacagagaagagaagagctTTCTCAGATACAGATATCGAGACAAACAAAGGTGTCTTTCTTCCAGGCGAAGATCAATCAGACGGAGCCATGAAGAGGTTCAGTACCTTATTTTCGTCTTTCCGGGGAAAAATCAGCAAAGACAgaCCTGGTAAGGAACAGGATCTACCTGCTACCACAGAGCTCTCTCCCGTGGAAGAAAAGGCGAAGGAGCAGCGATACGCTAGCGGGCAGTTTTTCTTTGAATATCTAGTGGTGGTTCGACCTAAAAAGACCAAAGATGGGATATACGAGCCACAGATCATCTATCAGTTCCCTAAGAAGGATGGAATGGTGCGATTTcagaaggaggaggaagagaagacATTAAAGGCGCTCACACTCTTTTGCTTTCCAGAGGGTGTAAACTGGGCGCCCTTAACAGAATATCCCAGTGAAACGTTCTCTTTCGTGCTTACAGATGTTGATGGGACGAGGAAGAATGGATACTGTAGGAGGCTACTGCCCGATGGAAAGGGGGCTCGTCTGCCTGAGGCCTACTGTATCATCAGTAATGTGGCCtgttttggactcttttccaagATCTTTGATGAAGTGGAACAGCGGAGAAAAATCTCAATGGCAATGATTTACCCATTTATGCAGAGCCTGAGGGAATCAGCATTCCCTGCCCCTGGACACACTGTTAATATCAAAAGTTTTATTCCAGAAAGAGGCACAGAGATCATCAGTTTGACTCGTCCGACAGACTCCTGGCTGGAGCATGTAGATTTCCGCACATTGTTCAAATGCCTGTCAGATGAGGAGGTGCTCCAGGTGTTTGCTGCTACTGTGCTAGAGCGGAGGATCATCTTCATCGCCGATGAGCTCGGGACGCTGTCTCAGGTGATTCACGCGGTGGCTGTTCTCCTGTATCCATTCATCTGGCAGCACACGCTCATTTCCATCGTTCCCGAGATCCTCATCGACGTCGTCATGGCACCCACGCCGTACCTGCTGGGCGTCCAGAAAAGTCTCGCAGATCAGGCCACTGATCAGACCGAGCTGCTTGTTGTTGACTTGTCAGAGGGCAGGAAGGAGACATTTATCAAGAGCATGGGAGATGAGGACACAATATTACCTCACAAACTCAAAGACGAAATCAAGCAGGCCCTCAGtgccaaaaatgagaattcaaGTCTTGAGGAGTTGAACCGGGTGGTCCCAGAAGCTTTCCTACCCTTCTTTATCAAGACCGTCGGTCACTTCTCTAAGTACATCGTGAGGAATGGCAAAGACCAGCGGGGAGAATTCCAGCGAACAAATTTCTGTAAAGCAATAGAATCTAAGAGCACACGGCGGTTTGTGAAGAAATTTGCACAGACGCAGATGTTCGATCTTTTCATTCAGGAAATGGAACAGAGACCTGCCTCTCAGGACGGCACAGGGTTTTTTGACAAAAAGATTGCTGAATACCACAAAAAGATGAGGGAGAAATCCAAGAAACACTAGTGGAAGCACTCACCAAAGTAGCTGGTTGTAAATCTCGTGTGAAATAAATCAGTCAGTAGTAAATAATTTTAAGGAATGTAGATAGAAttcagattattttttatttatgttgtgaTGTGTTAGTTGTCATACTTTCACTGCTGTTTGTAATTTGTGTCAGGGTCATTTTGGGGGATTATGGGTAACCGTATTGCGATAAGCTGCTGTATTTAACGCATGTACGGCTTGTTTCAACTTTTGAAACGTTTTGACCAGAAGGTTCAATGACAAAGAAACAGAGCCAGTGGAAACATGCTGAATTCAAAAACAGATTaagcaaatggaaaaaaataataatttaatctcCATATTTCAAGGATAATTGTAAAAGCACTGAGATGTGTGAAAGTATTTAACGTTTCTTTTTCgaattaaaaggaaaaactcTTA
>XM_043247228.1
ttattgatgtattttctAATTCTTATATCCATTAAAATTTTCACGTAACTAGATTATGACTATTATCTGCTATTTTATGCAGATTGTTTAAGCAAGTGCTTCATGTCACATTAAAATGGCCATGCGAACAGGATACGTGGCTCAGATATAAGTGCAAACTTCTCGTGATGCTGCTGTTTGACCTCTCTACAACAAAACCACCACAATTCTGATACTTCCTGTGGTGGTGTGGCTATCACAGATCATTTCTTTTAAGAGTGCAACTAGCAAAAGCAGTTTTGTGATTTGGTTAAGCTGGCTTCTCTGTTTTTAAAGTCTTGTTTAGAAGCACAAAACGATTTAGTTTCGGGAACAATGGAGCAGGTTACTCATGTCTGTGATCTCTGAACACGCGTGCAGTCAAGGGAGTGTCAAGACTTTTCCGTTAACGATAAGGAGTCGGCAAGTTAATATTTACTTAAGGACCCAAAGGACTATAACCTTGGTCTCTGGGAAAAAACCTTGGAAGTTTCTCACATTGAAGGAGCAACGAATTTGACATTAAACAAGgtgacacaatgacatcatccaGGAAAACCTGGGCCTTCTCCTCTCTGCGTACAAAGTCCAGAGCATCGCTGGAGGAGGGGGAAAATTTCAGAAGAagattgttttcttcttttagaagTGATCGACGTGAACCAAGATCTCAAAGAGAAGAAGATGacacagagaagagaagagctTTCTCAGATACAGATATCGAGACAAACAAAGGTGTCTTTCTTCCAGGCGAAGATCAATCAGACGGAGCCATGAAGAGGTTCAGTACCTTATTTTCGTCTTTCCGGGGAAAAATCAGCAAAGACAgaCCTGGTAAGGAACAGGATCTACCTGCTACCACAGAGCTCTCTCCCGTGGAAGAAAAGGCGAAGGAGCAGCGATACGCTAGCGGGCAGTTTTTCTTTGAATATCTAGTGGTGGTTCGACCTAAAAAGACCAAAGATGGGATATACGAGCCACAGATCATCTATCAGTTCCCTAAGAAGGATGGAATGGTGCGATTTcagaaggaggaggaagagaagacATTAAAGGCGCTCACACTCTTTTGCTTTCCAGAGGGTGTAAACTGGGCGCCCTTAACAGAATATCCCAGTGAAACGTTCTCTTTCGTGCTTACAGATGTTGATGGGACGAGGAAGAATGGATACTGTAGGAGGCTACTGCCCGATGGAAAGGGGGCTCGTCTGCCTGAGGCCTACTGTATCATCAGTAATGTGGCCtgttttggactcttttccaagATCTTTGATGAAGTGGAACAGCGGAGAAAAATCTCAATGGCAATGATTTACCCATTTATGCAGAGCCTGAGGGAATCAGCATTCCCTGCCCCTGGACACACTGTTAATATCAAAAGTTTTATTCCAGAAAGAGGCACAGAGATCATCAGTTTGACTCGTCCGACAGACTCCTGGCTGGAGCATGTAGATTTCCGCACATTGTTCAAATGCCTGTCAGATGAGGAGGTGCTCCAGGTGTTTGCTGCTACTGTGCTAGAGCGGAGGATCATCTTCATCGCCGATGAGCTCGGGACGCTGTCTCAGGTGATTCACGCGGTGGCTGTTCTCCTGTATCCATTCATCTGGCAGCACACGCTCATTTCCATCGTTCCCGAGATCCTCATCGACGTCGTCATGGCACCCACGCCGTACCTGCTGGGCGTCCAGAAAAGTCTCGCAGATCAGGCCACTGATCAGACCGAGCTGCTTGTTGTTGACTTGTCAGAGGGCAGGAAGGAGACATTTATCAAGAGCATGGGAGATGAGGACACAATATTACCTCACAAACTCAAAGACGAAATCAAGCAGGCCCTCAGtgccaaaaatgagaattcaaGTCTTGAGGAGTTGAACCGGGTGGTCCCAGAAGCTTTCCTACCCTTCTTTATCAAGACCGTCGGTCACTTCTCTAAGTACATCGTGAGGAATGGCAAAGACCAGCGGGGAGAATTCCAGCGAACAAATTTCTGTAAAGCAATAGAATCTAAGAGCACACGGCGGTTTGTGAAGAAATTTGCACAGACGCAGATGTTCGATCTTTTCATTCAGGAAATGGAACAGAGACCTGCCTCTCAGGACGGCACAGGGTTTTTTGACAAAAAGATTGCTGAATACCACAAAAAGATGAGGGAGAAATCCAAGAAACACTAGTGGAAGCACTCACCAAAGTAGCTGGTTGTAAATCTCGTGTGAAATAAATCAGTCAGTAGTAAATAATTTTAAGGAATGTAGATAGAAttcagattattttttatttatgttgtgaTGTGTTAGTTGTCATACTTTCACTGCTGTTTGTAATTTGTGTCAGGGTCATTTTGGGGGATTATGGGTAACCGTATTGCGATAAGCTGCTGTATTTAACGCATGTACGGCTTGTTTCAACTTTTGAAACGTTTTGACCAGAAGGTTCAATGACAAAGAAACAGAGCCAGTGGAAACATGCTGAATTCAAAAACAGATTaagcaaatggaaaaaaataataatttaatctcCATATTTCAAGGATAATTGTAAAAGCACTGAGATGTGTGAAAGTATTTAACGTTTCTTTTTCgaattaaaaggaaaaactcTTA
>XM_043247229.1
GAACTTTTCcaccaatgcattttttttttatttcatcattttcagtTTGCATTGGTAAGTCtgtgaacaattttttttcagaaatgaatCTTGTGTAGTCAATATATAGGGTATAAAAAAGGTCTTTAACTCTCTGAGATATTTCTACCGAAGTGAAACAACGGGGATGAAGCCTTATCAGCGTTGGCAAGTGTTATTGAGTTAGCAAACTTATTAGTTAGCTCACCGAGATTAAACCGCTTTTACAAGAGTCACCTGGTCATGAAGGcatcaaaagacaaacaaacgcGGACGTGTAAAGTATACAGTGTCAAGTATAGTGTCCTATAAATGATGTAATTATATGTCACACCAGTGTCATCCAAAAGTACCTGTGGTTCAGATAAATTGACTCCATTGAAGAACCGAGAAAGTAAGGAATTCACACGGACTGAAGACGTTTAACGGTTCACATCGTTTGACGAGTCTTGCGACCTGCCGTACACTTCTTTTCACCGATTCGGTTCGTTCGGACAGTTTATTTCAATAAGTCATAtggttttattgatttgtttgtttgtataatgctatatatatatatcacaatattttCCATTTCGTTTTATAAATTATGCCGTTTGACTTTTCCCTGAAAGTCAAATGAATCACGAACGGTTTGCGACTCGGTTCGAATGAACCGCCGATCTAAGACGAACCATTGATTCGCGAATCAGACATCAGCAGCTCGCGCGCGCACACACCCCGGCTGCACACGTTCATTCGCGGCAGTACGGAGATCTTGCTCCCCACAAACATACCCGTTTAATTGACAAACTTTACGCAAAGAGATTTGAACATGAACGGAATTACTCCCTCTAATGTCAAAAGAAGAGGAAAGAAGGGGAACTCACGTAAACACCGGAGTGTCTTTCTTCCAGGCGAAGATCAATCAGACGGAGCCATGAAGAGGTTCAGTACCTTATTTTCGTCTTTCCGGGGAAAAATCAGCAAAGACAgaCCTGGTAAGGAACAGGATCTACCTGCTACCACAGAGCTCTCTCCCGTGGAAGAAAAGGCGAAGGAGCAGCGATACGCTAGCGGGCAGTTTTTCTTTGAATATCTAGTGGTGGTTCGACCTAAAAAGACCAAAGATGGGATATACGAGCCACAGATCATCTATCAGTTCCCTAAGAAGGATGGAATGGTGCGATTTcagaaggaggaggaagagaagacATTAAAGGCGCTCACACTCTTTTGCTTTCCAGAGGGTGTAAACTGGGCGCCCTTAACAGAATATCCCAGTGAAACGTTCTCTTTCGTGCTTACAGATGTTGATGGGACGAGGAAGAATGGATACTGTAGGAGGCTACTGCCCGATGGAAAGGGGGCTCGTCTGCCTGAGGCCTACTGTATCATCAGTAATGTGGCCtgttttggactcttttccaagATCTTTGATGAAGTGGAACAGCGGAGAAAAATCTCAATGGCAATGATTTACCCATTTATGCAGAGCCTGAGGGAATCAGCATTCCCTGCCCCTGGACACACTGTTAATATCAAAAGTTTTATTCCAGAAAGAGGCACAGAGATCATCAGTTTGACTCGTCCGACAGACTCCTGGCTGGAGCATGTAGATTTCCGCACATTGTTCAAATGCCTGTCAGATGAGGAGGTGCTCCAGGTGTTTGCTGCTACTGTGCTAGAGCGGAGGATCATCTTCATCGCCGATGAGCTCGGGACGCTGTCTCAGGTGATTCACGCGGTGGCTGTTCTCCTGTATCCATTCATCTGGCAGCACACGCTCATTTCCATCGTTCCCGAGATCCTCATCGACGTCGTCATGGCACCCACGCCGTACCTGCTGGGCGTCCAGAAAAGTCTCGCAGATCAGGCCACTGATCAGACCGAGCTGCTTGTTGTTGACTTGTCAGAGGGCAGGAAGGAGACATTTATCAAGAGCATGGGAGATGAGGACACAATATTACCTCACAAACTCAAAGACGAAATCAAGCAGGCCCTCAGtgccaaaaatgagaattcaaGTCTTGAGGAGTTGAACCGGGTGGTCCCAGAAGCTTTCCTACCCTTCTTTATCAAGACCGTCGGTCACTTCTCTAAGTACATCGTGAGGAATGGCAAAGACCAGCGGGGAGAATTCCAGCGAACAAATTTCTGTAAAGCAATAGAATCTAAGAGCACACGGCGGTTTGTGAAGAAATTTGCACAGACGCAGATGTTCGATCTTTTCATTCAGGAAATGGAACAGAGACCTGCCTCTCAGGACGGCACAGGGTTTTTTGACAAAAAGATTGCTGAATACCACAAAAAGATGAGGGAGAAATCCAAGAAACACTAGTGGAAGCACTCACCAAAGTAGCTGGTTGTAAATCTCGTGTGAAATAAATCAGTCAGTAGTAAATAATTTTAAGGAATGTAGATAGAAttcagattattttttatttatgttgtgaTGTGTTAGTTGTCATACTTTCACTGCTGTTTGTAATTTGTGTCAGGGTCATTTTGGGGGATTATGGGTAACCGTATTGCGATAAGCTGCTGTATTTAACGCATGTACGGCTTGTTTCAACTTTTGAAACGTTTTGACCAGAAGGTTCAATGACAAAGAAACAGAGCCAGTGGAAACATGCTGAATTCAAAAACAGATTaagcaaatggaaaaaaataataatttaatctcCATATTTCAAGGATAATTGTAAAAGCACTGAGATGTGTGAAAGTATTTAACGTTTCTTTTTCgaattaaaaggaaaaactcTTA

Function

symbol description
dennd2da Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be active in cytosol and nucleoplasm. Orthologous to human DENND2D (DENN domain containing 2D).

NR:

description
PREDICTED: DENN domain-containing protein 2D-like

GO: NA

KEGG:

id description
K20161 DENND2; DENN domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247227.1 False 2366 mRNA 0.44 16 6507857 6521964
XM_043247228.1 False 2624 mRNA 0.43 16 6507857 6518092
XM_043247229.1 True 2770 mRNA 0.43 13 6507857 6516944

Neighbor

gene id symbol gene type direction distance location
slc2a6 slc2a6,LOC107725299,LOC107599026 coding downstream 28963 6474756 ~ 6478894 (-)
LOC122350067 LOC107598986,LOC107725298 coding downstream 34174 6470699 ~ 6473683 (-)
LOC122351122 si:dkeyp-51b7.3,fibcd1,LOC107598982,LOC107665003,LOC107725318,LOC108438350,LOC107557183,LOC106585783 coding downstream 308577 6108592 ~ 6199280 (-)
traf1 traf1,LOC107599053,LOC107664983,LOC107709033,LOC107674383,LOC107557184 coding downstream 402581 6094051 ~ 6105276 (-)
phf19 phf19,LOC107599052,LOC107757290,LOC107674297,LOC107557185 coding downstream 416246 6063268 ~ 6091611 (-)
spag17 spag17,LOC107598987,LOC107664984,LOC107664968 coding upstream 989 6522953 ~ 6535787 (-)
zgc:194990 zgc:194990,LOC107699042,LOC107557196,LOC107758027 coding upstream 54361 6576325 ~ 6587081 (-)
si:ch73-61d6.3 si:ch73-61d6.3,LOC107725329,LOC107665009,LOC107758028,LOC107699027,LOC107598988 coding upstream 65245 6587209 ~ 6597575 (-)
kcnn1b kcnn1,kcnn1b,LOC107557189,LOC107758025,LOC107598990,LOC107665010 coding upstream 81104 6603068 ~ 6636077 (-)
ccdc124 ccdc124,LOC107557177 coding upstream 114779 6636743 ~ 6643323 (-)
G61582 NA non-coding downstream 39441 6467953 ~ 6468416 (-)
LOC122350799 LOC107725298,LOC107598986 non-coding downstream 232647 6273884 ~ 6275210 (-)
LOC122350056 NA non-coding downstream 302399 6204023 ~ 6205458 (-)
G61554 LOC102215562 non-coding downstream 483019 6023995 ~ 6024838 (-)
G61550 endog non-coding downstream 540735 5845963 ~ 5967122 (-)
G61629 NA non-coding upstream 29440 6551404 ~ 6551711 (-)
G61640 NA non-coding upstream 39486 6561450 ~ 6561918 (-)
G61663 NA non-coding upstream 135534 6657498 ~ 6658284 (-)
G61782 NA non-coding upstream 340064 6862028 ~ 6862954 (-)
G61860 cacna1e,LOC107707593,LOC107657843,LOC107599003 non-coding upstream 752626 7274590 ~ 7281165 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other downstream 64875 6423742 ~ 6442982 (-)
LOC122350596 LOC107557202,LOC107757303,LOC107725315,LOC107674335 other downstream 546751 5919961 ~ 5961106 (-)
G61513 NA other downstream 890193 5614329 ~ 5617664 (-)
c8h9orf116 LOC107757294 other downstream 898285 5605172 ~ 5609572 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other downstream 996914 5476213 ~ 5510943 (-)
LOC122350104 LOC107755295,LOC107665061,LOC107598999 other upstream 292507 6814471 ~ 6816747 (-)
xpr1a xpr1a,LOC107758009,LOC107755298,LOC107699288,LOC107665065,LOC107603171,LOC107599040 other upstream 353385 6875349 ~ 7056429 (-)
lhx4 lhx4,LOC107699337,LOC107550233,LOC107758007,LOC107599001,LOC107755297,LOC107665078 other upstream 569486 7091450 ~ 7102993 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other upstream 1155532 7677496 ~ 7687562 (-)
LOC122350139 elavl4 other upstream 1595044 8117008 ~ 8232774 (-)

Expression


Co-expression Network