abhd17ab (abhd17ab,LOC107700092,LOC107717562,LOC107548688,LOC107657939,LOC107750691,LOC107585854,LOC105895145)


Basic Information

Item Value
gene id abhd17ab
gene name abhd17ab,LOC107700092,LOC107717562,LOC107548688,LOC107657939,LOC107750691,LOC107585854,LOC105895145
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9504012 ~ 9511635 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247299.1
TAAGCATCTTTGACTGGAgtggaaaaaacacacagctctATTAGCCTATACCAGCAGATTATTACATGCCAGGACGGTAGCCGGGAATCAACTCGGAACGACAAACCAGAAATCGAGTTTTATTCCTGGAGGGCTCGGCTTTTATCTGCGGATGAGACATGTCCTCAACGGCGTCCAGGCCTTTATTTGTTGTCTGAGAGGAGTCGTAGCTGACTGGCTAGCTGGCTAACTCCCCCCTACCCCCTCACTACGAGCTAGCTACTTAGCGACAGAGGtgtgaaaatataaagaaatccGGCTTTGGCAGGCTGTGGTCAAGAGAACGACACCTGACAATGAATGGCCTTTCTGTGAGTGAGTTGTGTTGCCTGTTCTGTTGCCCCCCCTGCCCCAGCCGTATCGCTGCCAAGCTTGCCTTCCTGCCCCCTGAACCTACCTATGCCCTCCTGCCCGATCTGGAGGCCGGGCCGGTACCGGCCGGACCCACGGGGACGTCAGGCCTCCGGTCCCGGGGAGGTGGTGGCGGTGGTGGGAGTTCGATAGGGGGAGGGAATGCTCCAGGGGACGGGCGCTGGAAGCTTCACCTCACAGAGCGGGCAGAATTCCAGTATTCCCAACGGGAACTGGATGCCACAGAAGTGTTCCTGACTCGATCTAGTAGGGGGAACAGAGTGGGCTGCATGTATATCCGCTGTGCCCCCTCTGCCAGGTTCACTGTCCTGTTCTCCCATGGTAATGCAGTGGATCTAGGACAGATGAGCAGCTTCTATATCGGCTTGGGCACTCGCATCAACTGTAACATATTCTCTTATGATTACTCCGGCTACGGGGTCAGTACAGGGAAGCCCTCGGAAAAGAATTTGTATGCAGATATAGACGCAGCGTGGCAGGCTCTACGCTCACGATATGGCATTAGCCCAGAGAATATTATCCTGTATGGACAGAGCATTGGCACGGTGCCCACGGTAGACCTGGCATCACGATACGAGTGCGCGGCTGTGATTCTCCACTCCCCTCTCACCTCTGGCATGAGGGTGGCCTTCCCCGAAACTAAGAAGACTTACTGCTTTGACGCATTTCCCAAcATTGAGAAAGTGTCTAAAATCACGTCTCCAGTGTTGATCATCCATGGCACAGAGGACGAGGTGATAGATTTTTCTCATGGCCTGGCCCTGTATGAGCGCTGCCCCAAAGCCGTGGAGCCGCTGTGGGTGGAAGGAGCAGGACACAACGACATCGAACTGTACAGTCAATACCTGGAACGTCTGCGTCGTTTCATCGGGCAGGAATTGGCCGCACAACACGCCTAAGCACTCCTTCGTCTCCCTCTTGTCATCCCACCATCTCCCAGTCCGAGCAAGAATGAGATGGATGCATCAGTAACTTATTGAAGGCTGCCATTTTGTATGGACAACGTTACTGTTGGAGCAGTTTGACACATGATCCTCTGCTCaaatttgttttcttaaatgttttctttttttcccccccttcgTTTGTCATTTCCTTGTACatgtgagtgtgcatgtgtgtacgTATGCGTGCGCATGGGAACTCTGGGGCATGGAAGTGGAATTTCTATGGAGCAAGAAAGGATGGACGGATGCCTCTGTCGGTTTCAGCCCGACGGAAAGAAGCCAGACGCTGTCCTGTACCTCCAACCCGATGGTGTTTCTTAATATCTGAGCGTTCATTTGTCAGTTGAGCGTTTGCATCTCTGACCTGCTCTCATGATGCCTCAGCCTGAGAGATCTTCTCTTCCCACTTCTCATCAGGCAGCCTAAAATAGCTCATTCTCAGAGCCTAGCAATTTTTTTAGCCTTGCTGACCCtgcaggatgaaaaaaaaaaaaacgtttctttgGTGGAGGATATCAGGATTAAGGTTTGAAGCATCCTACATAGGCTCAACTATGCCCACCTCTGCatctttgttcatttgtttaacCATTTGGCTTCCTCTGGACAGTGTGTGTGTCCGTCTGATGCACTCACATTCCCTTCCAATGAGTTTTTGCCTTTTGGGATAAGATGACACCTGATGATCTACACCGCTTCAGGCAGGGAAAGCTCCAATCCTGGCACTGTGGCTTTTGTTCCCAGCAttatcagtcttttttttttttccctttttgctGTCTCTTTCCTTTCTTCTCAGCATGTGAGGGTGTCCATAGCACCCTGAGGTGAAAGAAACTGGGAGGGCTGATCTCTCATCATATTTCAATGAAACCACCACATTTGGGATGACACGATACGGACTACATTCACGTCCAGATCCATACATCATGTTTCTGAACTGTTGGGCCAGTAGAAAGATCAAGGTTTCATTATGTTGTCGGGACTTTCCTGAAGCCAGATCTTCGGCGTAGCATTTCCACATTAATTTTCAAGTAGTTCAACCTTTTAAATGGGATTTGGGTTAATAAATTGTGGAATTGTGTAAGAACATACAATTCACACAACGCGGGTAGCAGACAGAGGTAAAAACAGAAAGCACTTCTGAACCCTGTGGCGCACAACACGCAACCAGTTTTTCTCGTTTTCAGTCTGACATCAAGTGTGTTTCTACCACGGAAATGTTACTCTTCTCTTGTTGGCATTTGAAATTGAGCTCAAGCTATAATCATGCGTATTTACTCTCTTTTTGTTGATTGTTATGTTAAAGCAAATCGTTTCAAAGCAGAGCACATCATTTAGACTCCTTTTAATGCTAATAAAGGATTTCCCCTTTTCGTTTCAACTTTAAATTGCTAGTTAGTGGCACAGGGTTTAATCCATCTAAGTAAGGTTCTGAGCTGTGGGTAGTTTAAAGATTAGAACTAGCAATAAAGGCACAACAGTGAGGTCATCCGAAACCTATTGTTGCCGCCTCTAGTCAAGCTGCTCGTCTTCAAAGGGAGTTCGTCTGATTTGATCTGGACACAACTATGGCTCTTATAGCTATCAGGTTGTATTATGTTTAGGAAGATTGTCAAAGCTTTGAAAAACACTGGCGGTGAATTAAAAATCATACAGAGGTGTCTTTCTTTTAAACTAAGCTTTTCAACTGTGAATTATCAAGGGAACTTGCTGCTATAGAATGGTCTGAATGAAATTAAAGGGCCGAACCTTGCAACCTTTTGTGGTTTTCCGATGCGTCAAAGACTACcatgccttttcagtgagattagacctctcttcctctttctgccATGATTCATTCTTGCCCTTTTAACACTGCAGGCTGCACTTCCATTTTAGATTCCACGTAACAATGTGTTTAATtggattcattcatttcagtgtCTTGTCCGGATAGGTCTTTGCTTGATGAGGGTTCTGATTTTATGGTGTTGGAGTTGATAAGACATGTgatttcatcacattttttttttttttcttctcctagttaacattcattcatccatccactCTATTTGGTCTGTTATTATGTGCTCTGGTTAAACTGACTCCCATTAATGCACAAGCAATCTGTATTCCGAAAACACTGGTTTGTACATAATATCTGAATCCTAATTCCAGCCAATCCGATTCCATGTTTCATCATGTATTTAAGTGTGTAATCTGCGGTTGGATACAAAGGGGCTTGTTTGTTCTCCATTCTAACCAAAGACGACAGGTGTTGGTGTTGCGATGGCCGCCCACCGCCATTTGTCAGCGCTCAGATGTTGATCGGAGGAGGAGGCGGTGGACTTTGGCTGTTCAGAACAGAGCCGGGTCTCACACAATACAGGCTGCTGTTGATGCCGCAGAGGGGAAGTTTTTGTGTGGACTGTTGGTGCGTGTTTACCTCCTGTAAGACACAAGTGTTTGGAGGGCAGAAGCAATACTGACTTGGAGCCAGCGGACTGGATGTGAggatgctctgtgtgtgttaacaagaggggaggatGTTGGTTTGGGTTGGGGCTGGAGTTACCCAGAGGCTCCGTCCCAACACATTCAGATTCTGCTCTTTTtattaagatttgttttttgttttttttcttgtttaaagaaaataagttatagaaaagtctttttaaatcTATCagatgtatgtactgtataacATTGTTTGAGAAGCTTAATCTTGAGGTTTgagaatcagttttttttaatcttaatggATCGGGAGCAAGAGTCATTGGGGTGTTACTGTTCTATCCTTTTATGCATTATtctaatgttgttgtttttagttttaaatatgtccttttccttttccagaattaataataaaagagagatatcttagaaaataaaattatgaattgataa

Function

symbol description
abhd17ab Predicted to enable palmitoyl-(protein) hydrolase activity. Predicted to be involved in protein depalmitoylation and regulation of postsynapse organization. Predicted to be active in endosome membrane and plasma membrane. Orthologous to human ABHD17A (abhydrolase domain containing 17A, depalmitoylase).

NR:

description
protein ABHD17A-like isoform X1

GO: NA

KEGG:

id description
K01076 ABHD17; abhydrolase domain-containing protein 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247299.1 True 4262 mRNA 0.45 5 9504012 9511635

Neighbor

gene id symbol gene type direction distance location
sema6bb LOC107585853,LOC107717564,LOC107750685,LOC107657917,LOC107549930,LOC108413003,LOC107700081 coding downstream 13343 9378491 ~ 9490669 (-)
rorca LOC107657922,LOC107750669,LOC107548667,LOC107585851 coding downstream 137225 9353668 ~ 9366787 (-)
sh3gl1b sh3gl1b,LOC107750655,LOC107700047,LOC107717567,LOC107548638,LOC107585850,LOC107657927 coding downstream 151458 9335682 ~ 9352554 (-)
stap2b NA coding downstream 174824 9321262 ~ 9329188 (-)
cpox cpox,LOC107657924,LOC107717573,LOC107585846,LOC107550392 coding downstream 198671 9300474 ~ 9305341 (-)
zgc:77486 zgc:77486,LOC107585855,LOC107717563,LOC107657940 coding upstream 2316 9513951 ~ 9520753 (-)
plin3 si:rp71-61h23.4,LOC107657942,LOC107717561,LOC107750720,LOC107700160,LOC107549942 coding upstream 10086 9521721 ~ 9526061 (-)
rgl1 rgl1,LOC107750730,LOC107717560,LOC107657943,LOC107700121 coding upstream 17331 9528966 ~ 9552304 (-)
colgalt2b colgalt2,LOC107751084,LOC107700142,LOC107585927,LOC107676963,LOC107717557 coding upstream 50459 9562094 ~ 9579853 (-)
zgc:92140 zgc:92140,LOC107676598,LOC107585858,LOC107717558,LOC107700167,LOC107548740,LOC107750760 coding upstream 70193 9581828 ~ 9605966 (-)
G62519 NA non-coding downstream 89573 9408414 ~ 9414439 (-)
G62293 glis1,LOC102303521 non-coding downstream 418818 9082795 ~ 9085194 (-)
G62250 dio1,LOC107700640 non-coding downstream 465312 9030865 ~ 9038700 (-)
G62263 lrriq3,LOC107657910,LOC107585823,LOC107699824,LOC107548466 non-coding downstream 496907 9006834 ~ 9007105 (-)
G62262 NA non-coding downstream 497233 9006555 ~ 9006779 (-)
G62525 NA non-coding upstream 14992 9526627 ~ 9526966 (-)
G62564 NA non-coding upstream 191324 9702959 ~ 9703191 (-)
G62565 NA non-coding upstream 191741 9703376 ~ 9703598 (-)
G62567 NA non-coding upstream 197338 9708973 ~ 9709221 (-)
G62568 NA non-coding upstream 199011 9710646 ~ 9710996 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other downstream 241186 9257243 ~ 9262826 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 846726 8652304 ~ 8657286 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other downstream 854029 8647270 ~ 8649983 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 1087459 8392345 ~ 8416553 (-)
LOC122350139 elavl4 other downstream 1271238 8117008 ~ 8232774 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other upstream 188759 9700394 ~ 9708621 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 443046 9954681 ~ 9969485 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other upstream 483912 9995547 ~ 10041769 (-)
smim24 smim24,LOC107580287 other upstream 733561 10245196 ~ 10248156 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other upstream 877548 10389183 ~ 10392043 (-)

Expression


Co-expression Network