LOC122350660


Basic Information

Item Value
gene id LOC122350660
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1648478 ~ 1649618 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247341.1
atggtcgagtcctcCCCTGGGTCCCCGGTGGAAGAGTTGgcaggattgaggagatcctcaaaGTGTCAGacagtttgccagaacctctttgaggccatCCGTTTTTttccaccggtacctgtcagctgccttaGAAatcccacgagccaaccaggcctgataggactcctccttcagcttgacggcattaCTTACTTCTGGTGTCCACCACCGGGTTTGGGAGTTGCCGCCACAACATGCACCAGAGACTTTATGGCCACAGCTCCAGACGTCCACGTCGACAatagaggtagagaacatagtccacttaGACTCAATGtttccagcctccctcgggatccggtcaaagttctgaaGATCTCCCtaacaggggtctctgccaaacatTCCCAACAGACTCTTATGGTACGTTttggcctgccaagtctgtatTCGTCCGATAGTCAAACCTCAGCTTCAGAAGGAACAATGCGGCTTTTACCCTGGACATGGAaaactggaccagctctatacccacTTCAGggtactggagggttcctgggagtttgcccaaccagtccacatgtgttttgtggatttggagaaggcattcgaccagGTTCCTCACTGTGTCCTGTGGAGagtgctctgggaatacggggTAATACGGCCCATTGATAAGGGCTGTCTGATCTCTGTATGATCAGAgtaggagcttggttcgcattgccgccAGTAAGATAGACTTTTTCCCAGTGCATGCTGGACTCcaacagggctgccctttgtcaccggtcctgttcattatttttatggacaggatttcaaGGTGCAGCCGGGGGCcagagggggtctggtttggtgaccacaggatatcgtctctgctttttgcggatgatgttgtcttgttggctgcatctggacAGGACCTACAGTGTGCAACAGGgaggtttgcagctgagtgtgaagcggcagggatgagaatcagcacctcaatcaatctgaggccatggttctcagtcggacaagggtggcttgcccccatcaggttggtggggagttcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247341.1 True 1044 mRNA 0.52 2 1648478 1649618

Neighbor

gene id symbol gene type direction distance location
LOC122351062 NA coding upstream 88111 1559120 ~ 1560367 (+)
LOC122350265 rasal1 coding upstream 166924 1456231 ~ 1481554 (+)
spats2 LOC107749411,LOC107701385,LOC107573793,LOC107661167,LOC107572966,LOC107728257 coding upstream 382244 1253631 ~ 1266234 (+)
LOC122350095 NA coding upstream 405320 1236932 ~ 1243158 (+)
trim36 trim36 coding upstream 412901 1219724 ~ 1235577 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding downstream 153077 1802695 ~ 1807402 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding downstream 173018 1822636 ~ 1827411 (+)
LOC122350512 NA coding downstream 287143 1936761 ~ 1946949 (+)
ikbkb ikbkb,LOC107671012,LOC107722850,LOC107754415 coding downstream 316965 1966583 ~ 1995859 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding downstream 356466 2006084 ~ 2014684 (+)
G59902 dtx1,LOC107692206,LOC107572068,LOC107671029,LOC101885597 non-coding upstream 153747 1401759 ~ 1494731 (+)
G59903 NA non-coding upstream 156836 1396047 ~ 1491642 (+)
G59914 NA non-coding upstream 255050 1392143 ~ 1393428 (+)
G59899 NA non-coding upstream 379804 1268438 ~ 1268674 (+)
G59898 NA non-coding upstream 380086 1268184 ~ 1268392 (+)
G59943 NA non-coding downstream 2466 1652084 ~ 1666985 (+)
LOC122349901 NA non-coding downstream 52094 1701712 ~ 1702196 (+)
G59966 NA non-coding downstream 62289 1711907 ~ 1719099 (+)
G59968 NA non-coding downstream 74943 1724561 ~ 1778486 (+)
G59969 NA non-coding downstream 79449 1729067 ~ 1782537 (+)
pggt1b pggt1b other upstream 429674 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 796474 842077 ~ 852004 (+)
G59807 NA other upstream 843639 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 1097791 537775 ~ 550687 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 265842 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 365241 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 381206 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 388081 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 2198996 3848614 ~ 3850557 (+)

Expression


Co-expression Network