zgc:77486 (zgc:77486,LOC107585855,LOC107717563,LOC107657940)


Basic Information

Item Value
gene id zgc:77486
gene name zgc:77486,LOC107585855,LOC107717563,LOC107657940
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9513951 ~ 9520753 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247431.1
gttgcGCTATGGGTGACGTCACGCCCGTTGTTTCGGATGACGTCGAGAGAAGCAGGCCGCACGCGCATAGCAGGAACCTACTCTGTCAGTTTCTGTGGATCAAGGTCGTCGATTTCTCCGCAATCACACGGAAATACGGGATCGCCCTCTCCCGTCCCCCTTACCCCCCTTTTTAAACAGCATGGCTCAGGAGACAAATCAGACGCAGGTGCCAATGCTTTGCACTATGGGATGCGGTTTCTATGGTAACCCTCGCACCAATGGAATGTGCTCTGTCTGCTACAAGGAACATCTGCAGAGACAACAAGGAGGGGGGCGAAACAGTCCCCCAGGTGAGAAAGCTGCCACATCTCCTGTAGGTTCCCCAGGAGCATCTGCGGTAACGGTGGAGCCCACCCCTGTACCCACCACAGAAGCCGCTACCCCACCTGAAGAACGCACATCTAGTAGTTCGCCCAGCCCGGTAACCCAGCAGATGACGGCTATGAGCATCTCCCAGGACACAGCAACCACTGATTCAGACAGAGCAGAAgtagaggaggaagaggaggagggctCGTCTAAAAGCACAGGGCCAGCAGGGGAAGCTGCACAGGCTTCTTCAGACGGAGATCAGACTCCTGAcaagaacaaaaagaagaatCGATGCTTCACTTGTAGGAAAAAAGTTGGCCTCACGGGCTTTGACTGTCGCTGCGGTAACCTGTTTTGCGCTATCCACCGTTATTCTGACAAACATGACTGTCCCTACGACTACCGAGGAGCCGCTGCCGCCCGCATCCGCAAGGAGAACCCCATCGTGGTAGCCGAGAAGATTCAGAAGTTATGAGGACTGACagctaaatgagcaaaaattgTTTGACCTGCAAGTTTTGGAACCATGGCGCTGAATAACACCATTCTAAACTGGGTTCATGTCTTCATTGTAGGATAAGGTGGGTGGGGTTGTAGGGTACAGCCCCTGCTTGGCCACTCCCTAAACTATCATCTCCCTGTCTCTCCCAGAAGGCTGGtgtagaggtgtgtgtgtgagtgtgagtaaatgcGTGACGGGTtgaaagatgtgtgtgtgttgttgtttttttctgttttttttttgagagccAGGGAGAAGAGGGATTGGTTGTCAGGTGGGCATCCATGTGCACCGGGGAAGGGTGGACTCTTTAGTTTTTACCCTGGCATTGATTTTTGTTAggatattaacattatttttttataggaGCCCTGAGATGTTCAGGAGTCCAATCGGAGAGGGTGGGTGGGGTGGAACGTCAAGAGGGAATTTCTCTGATATTGCAAAACATTGAAGAATATAGGTTTTAATGACTACTCCCTCATTTACCCATGTAAAATTCTTTTACtgtgttattctttttttttttttctttattctgatGAATTATCCCGACATGTCAAATCCCAgcctgtgcatttaaaaaaatatttctcttttatatATTGACTTATCATGCTAATGTTGGGTGCATGAATAGTTATCGGATAGGGTTTGAAGGGGGAAGGGGTGGGGTGTAGCAAGAGCCTTGACATAAGCTTAGCGCTGAGTTGAGttttttcttatcttttctgttttaatgagtGTATGGCATCAGAAgatctatattaatatattgtacGTAGCTTGAATTGTGTGATTgcattctatttattttgtattatcatTTGGTTGGTTGGTACTGGAGGATTGGAAGCAtgtgtccaaaaaaaaatccagtagGTTATCCCTTAATGATATTTCTGTCtacatatgcatttaaaaaaaaaaaaaaaaaaaaaaggtcctgATGGAGTTGAGTTGGACTAGATTGGGCTTTTTAGAATCAAAGCACAAGATCGTTCTTCAGTTTCTTCGCACAAACGCAACAAAAAGTGCAGTTAGTGTAGGATCCTCGGTGCTTTACGGAAACTAGCAGACCCGTTATTGCTAATGCACGCCAGCGATGAACTTTTCTGACCTTTGCCCAAGAGCAAGGTATTCGATAACCACCAGCAGACCAATGAATGATGCTAATGGAACCGGCTACTAATTTGTTTATTAGGCAACGCCTTTTGTTccaaaaacatgtatttacaaTTAATACAGCTCATAGTGGaagatgcacacacacttcccCAACAGATAAACGTTGCATGCTCGCACAAATATTAGGCCAAATGCAGAGTTTGCTACAGCCACACATTAACATTGCAACACGAATGTAAAACAAACGTCCCATTGCATGGGCGAATGAAGCCTGCTTTCCAAATGAACAGGATTCTAATGTAAATACCATGTGGCTGCCATTCTAAAATAGAATGTTTAAGAAAGAACAGGAAAGGTACAACGGGGGAAAAAACgtattttgtgtgtatgtagtGTTTATTAACTACCCATACGTAAGGAGAAAGGTTCGCCGTGGTGTTCTCTGTCATCCTTTGCGTGAATCTTGTGTCTTTTGTGCtggttgtgtttttaattactttttttttttttttttttgtaaaagggCTGAAACAACCGTTTTGTATTTATCCTTAATGTTGTCCAGCAATCTTCCCTCCATAATGTCTCTTGATGTGCACATTTTCCATGATTCGTGTACAGTCCCCTTGACTTGTTGAAATGAACTTTGGTGGATGTATCCTATTTGAAGTCCCGGTAATGACCTTGCTGCTTTATTAAGGAAATAACCTGAGCTTTAATTAGCACCGTCTGTGATTGCAGCATTATCCTCAGTGGGGCTGCCAGCTCAAGAGGGCTTTTGTGAAAGGCAGGTGTAAGTGGCTCAGCGAGCTGGCATGTGTACACGCCATGCTTGGCTGAGCCGGCATCCTGACAGCCTTTTAATGAGGGTTTGGATCTCACGCTTTCTGTCTGCACCGTTTGCTGGAGGATAATCCCACCTTTCTAGGGTTTGAGTGTAGGGATACAGACGCTGTATGGGAACGCTAGACTCCAGTTCGCGGTGAGATTGTTGTAGCGTGGTGGGCACAAAACTGTGAATGTAGTCAACCGCTTGACTATGAAGCTCCAGTGGGTTAAAAGCCAGTCGGTCACCTCTGTTGTTGCCTTCAGTGTCTTATCGGACCGTTGGCACTATATGCCAGTGTGTTATCCCTTCAGTGCTAGCAATGATTAACCGCCTTCATTGCATGTTATTGAGCAAAATAGAGGAGCGACTTCTTCCGTACATGTAACTGAAGAAGAATTGCCTTGATTTTAGTGAAGGTGTcgagattgatttttttttttttttttttttctcttagtaGTTCATCAGAACATTCGGATGGGTGATGTGAGTTTCAGCTCAGGCATGTTTGGCAGTACGTTAACCAGCATTCATCAATTTAATTTACCAGCGTGCCCAGTCCCCCAGAGACACCACCAGataccttttttgttttctttttaaatttaggATTGTATGATGTGTATGAGTAAgtataaaaccaataaaatcacaaagtttattttaaattta

Function

symbol description
zgc:77486 Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in lipid storage and positive regulation of sequestering of triglyceride. Predicted to be active in cytosol and lipid droplet.

NR:

description
AN1-type zinc finger protein 5-like

GO:

id name namespace
GO:0003677 DNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K24687 ZFAND5_6; AN1-type zinc finger protein 5/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247431.1 True 3485 mRNA 0.44 6 9513951 9520753

Neighbor

gene id symbol gene type direction distance location
abhd17ab abhd17ab,LOC107700092,LOC107717562,LOC107548688,LOC107657939,LOC107750691,LOC107585854,LOC105895145 coding downstream 2316 9504012 ~ 9511635 (-)
sema6bb LOC107585853,LOC107717564,LOC107750685,LOC107657917,LOC107549930,LOC108413003,LOC107700081 coding downstream 23282 9378491 ~ 9490669 (-)
rorca LOC107657922,LOC107750669,LOC107548667,LOC107585851 coding downstream 147164 9353668 ~ 9366787 (-)
sh3gl1b sh3gl1b,LOC107750655,LOC107700047,LOC107717567,LOC107548638,LOC107585850,LOC107657927 coding downstream 161397 9335682 ~ 9352554 (-)
stap2b NA coding downstream 184763 9321262 ~ 9329188 (-)
plin3 si:rp71-61h23.4,LOC107657942,LOC107717561,LOC107750720,LOC107700160,LOC107549942 coding upstream 968 9521721 ~ 9526061 (-)
rgl1 rgl1,LOC107750730,LOC107717560,LOC107657943,LOC107700121 coding upstream 8213 9528966 ~ 9552304 (-)
colgalt2b colgalt2,LOC107751084,LOC107700142,LOC107585927,LOC107676963,LOC107717557 coding upstream 41341 9562094 ~ 9579853 (-)
zgc:92140 zgc:92140,LOC107676598,LOC107585858,LOC107717558,LOC107700167,LOC107548740,LOC107750760 coding upstream 61075 9581828 ~ 9605966 (-)
edem3 LOC107717559,LOC107585860,LOC107750782,LOC107548759,LOC107700180 coding upstream 85752 9606505 ~ 9618126 (-)
G62519 NA non-coding downstream 99512 9408414 ~ 9414439 (-)
G62293 glis1,LOC102303521 non-coding downstream 428757 9082795 ~ 9085194 (-)
G62250 dio1,LOC107700640 non-coding downstream 475251 9030865 ~ 9038700 (-)
G62263 lrriq3,LOC107657910,LOC107585823,LOC107699824,LOC107548466 non-coding downstream 506846 9006834 ~ 9007105 (-)
G62262 NA non-coding downstream 507172 9006555 ~ 9006779 (-)
G62525 NA non-coding upstream 5874 9526627 ~ 9526966 (-)
G62564 NA non-coding upstream 182206 9702959 ~ 9703191 (-)
G62565 NA non-coding upstream 182623 9703376 ~ 9703598 (-)
G62567 NA non-coding upstream 188220 9708973 ~ 9709221 (-)
G62568 NA non-coding upstream 189893 9710646 ~ 9710996 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other downstream 251125 9257243 ~ 9262826 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 856665 8652304 ~ 8657286 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other downstream 863968 8647270 ~ 8649983 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 1097398 8392345 ~ 8416553 (-)
LOC122350139 elavl4 other downstream 1281177 8117008 ~ 8232774 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other upstream 179641 9700394 ~ 9708621 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 433928 9954681 ~ 9969485 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other upstream 474794 9995547 ~ 10041769 (-)
smim24 smim24,LOC107580287 other upstream 724443 10245196 ~ 10248156 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other upstream 868430 10389183 ~ 10392043 (-)

Expression


Co-expression Network