LOC122350776 (LOC107599836,LOC107657909,LOC107710921,LOC107743853,LOC107548462)


Basic Information

Item Value
gene id LOC122350776
gene name LOC107599836,LOC107657909,LOC107710921,LOC107743853,LOC107548462
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8972793 ~ 8975940 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247484.1
ATGGTGCAGATGAGAGCGGATGATGTTTATGGGATGGAGCGCGCGCATTTAAAGGCTGCGCGTGTTTCGGTGAGAGATTTGGAAATCCGAAGCGCGTTCACTGCAGTCATGTCTATGGATCGCAATGAGGATTTTATCAGCGAGAGCAGAGAGGTTTCAAGCAACATTTCTATGaacTCACCAGAACTTCTGAATGGCCAGTCTTCTCCGTCTGCCCAAGCAATGGCATCTGATGCTCTCCAAGGCAAAGCAGTTTGCACAAGGTGTAGAGAAGACATCCTAGACCGGTATCTCCTGAAGGTCAATGGCTTGTGCTGGCACGTGCAATGCCTGTCGTGCAGTGTGTGCCAAACCACTTTGAGCGGACACATAACATGCTACGTTAGAGAGCGAGAGGTCTTCTGCAAACTAGATTACATCAGGAGGTATCAAACATGGTGCTCGTGCTGCGGTGAAGCGGTTCGCTCCACAGACTGGGTACGCAGGGCGAAGGGAAACGTTTACCACCTGGCGTGCTTTTTGTGCTTCTCTTGCAAGAGGCAGCTGTCCACAGGCGAGGAGTTTGCTTTGGTAGGACAAAAATTGTTGTGTCGAGTTCATTACGACAGCATGCTGGACAAACTCAAAGGTGCTGCTGAAAAAGGAAAAAACGTCTCTCCTGAAGGCGTGTTGCATACAGGATatgaaataaaccaaaaacCATCTAAAAGAGCACGTACCAGTTTCACTTCAGACCAACTACAGGTTATGCAGGCCCAGTTCGCTCAGGACAATAACCCAGACGCACAGACACTTCAGAGGCTTGCAGAACAGATCGGCCTTAGCCGGCGCGTCATTCAGGTCTGGTTTCAGAACTGTCGCGCCCGTCATAAGAAGCACATTTCTCCTCCTCGTTCAGCAGAACTGACAGGAGACACGTCTTCACTCCAGTCTGTGTCCATCTTAAGTGAGCGGCGCTATTCACACGCTTCCTTGCTTACAGCACTGCACAGCACCTGCATTGATGttcacaCACCATCATCTCTACTCTACGAGCCAATACCATCTTATAAATCAACGCATCTACCAATCAGCAGCAGCTAAACGCTTTACAGTTCAATTGTAACTATATTTATACCGCAGATACGCTATGTATTCATTTAGGTTTtcattattgtgttttgttcatATCCCAAGTggtttaactaaaaat

Function

NR:

description
PREDICTED: LIM/homeobox protein Lhx8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247484.1 True 1192 mRNA 0.48 8 8972793 8975940

Neighbor

gene id symbol gene type direction distance location
st6galnac5b st6galnac5b,LOC107599835,LOC107657873,LOC107710911,LOC107743856,LOC107550326,LOC107700626 coding downstream 38042 8922693 ~ 8934751 (-)
prkcz prkcz,LOC107710919,LOC107743854,LOC107548418 coding downstream 60806 8820356 ~ 8911987 (-)
skia ski,skia,LOC107548407,LOC107699765,LOC107657901,LOC107599811,LOC107710903 coding downstream 164194 8746887 ~ 8808599 (-)
rab3c rab3c,LOC107599832,LOC107700568,LOC107743864 coding downstream 366627 8600995 ~ 8606166 (-)
ndufaf2 ndufaf2,LOC107752447,LOC107743894,LOC107657848 coding downstream 492062 8478681 ~ 8480731 (-)
tnni3k tnni3k,LOC107743849,LOC107550356,LOC107699804,LOC107657874,LOC107710912 coding upstream 15403 8991343 ~ 9001962 (-)
fpgt fpgt,LOC107699845,LOC107585822,LOC107548491 coding upstream 26281 9002221 ~ 9006003 (-)
acot11b LOC107710923,LOC107585821,LOC107657911,LOC107548485,LOC107743846 coding upstream 33786 9009726 ~ 9018000 (-)
rps8b LOC107743876,LOC107710907,LOC107579213 coding upstream 134451 9110391 ~ 9113350 (-)
elovl8b elovl8b,LOC107657928,LOC107585829,LOC107743843,LOC107699894,LOC108442366,LOC103026255 coding upstream 137547 9113487 ~ 9116378 (-)
G62255 NA non-coding downstream 20 8968289 ~ 8972773 (-)
LOC122351086 NA non-coding downstream 30538 8936078 ~ 8942255 (-)
G62241 NA non-coding downstream 51097 8921481 ~ 8921696 (-)
G62235 NA non-coding downstream 51889 8918758 ~ 8920904 (-)
G62239 NA non-coding downstream 58789 8913482 ~ 8914004 (-)
G62262 NA non-coding upstream 30615 9006555 ~ 9006779 (-)
G62263 lrriq3,LOC107657910,LOC107585823,LOC107699824,LOC107548466 non-coding upstream 30894 9006834 ~ 9007105 (-)
G62250 dio1,LOC107700640 non-coding upstream 54925 9030865 ~ 9038700 (-)
G62293 glis1,LOC102303521 non-coding upstream 106855 9082795 ~ 9085194 (-)
G62519 NA non-coding upstream 432474 9408414 ~ 9414439 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 315507 8652304 ~ 8657286 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other downstream 322810 8647270 ~ 8649983 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 556240 8392345 ~ 8416553 (-)
LOC122350139 elavl4 other downstream 740019 8117008 ~ 8232774 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other downstream 1285231 7677496 ~ 7687562 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other upstream 281303 9257243 ~ 9262826 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other upstream 724454 9700394 ~ 9708621 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 978741 9954681 ~ 9969485 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other upstream 1019607 9995547 ~ 10041769 (-)
smim24 smim24,LOC107580287 other upstream 1269256 10245196 ~ 10248156 (-)

Expression


Co-expression Network