LOC122350884


Basic Information

Item Value
gene id LOC122350884
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 7380546 ~ 7382812 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247652.1
ATGCCAGGGAAACAGGGATTCAGAGGCAGAGGAGGGCAGTCTGGTGTACAGGGAGAGATTGGCCCTTCTGGACCTGCTGGTTCACCAGGGCCCACGGGATATGATGGATCTGTTGGAGATCTGGGGAGACAGGGAAATGATGGATCTAAGGGAGAGAGAGGCCACCCTGGTATCCAAGGTGCTTCTGGACTGAGAGGAGACAAGGGTCAGACTGGCCAAGGGGGATTCGTTGGTTTTCCAGGACCTTTGggGGAGATGGGAAAATCTGGAGAACCAGGGCCTGAAGGAGAGCCCGGTATTAAGGGCCGACCAGGAGTCCCTGGAGGAACCGGGTTTAAAGGTCACAAGGGACATCAGGGTGTTTCAGGGAGCAGAGGACAGGACGGCATTCACGGTGCATCTGGATCGATTGGACCATCAGGATCAGATGGAGATAAAGGACCTCAGGGTCCCCAAGGTTTACAGGGAAGGCCTGGTGCACCAGGAGTCCAAGGTCCCGTTGGAAAAAGCggGGAACCAGGGAGCCTGGGCCTCACTGGCAAACCCGGAAAGCCTGGAATCAGAGGTGTTAAAGGCAGAGAGGGTTCAGTAGGGCTTTACGGCAGTCCTGGAGAGAAGGTTGGTGGTTTGTAAATGTACCAGTCACGTCATGTGACACACCatatgatgacaaaatgtaatgcaataaaaagctgaaaacattATTAGCTGTATTAAACAGTAATCGGCTGCAGAAGCAAAAGTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247652.1 True 747 mRNA 0.53 11 7380546 7382812

Neighbor

gene id symbol gene type direction distance location
LOC122350680 LOC107599044,LOC107700337,LOC107757981 coding downstream 2789 7375035 ~ 7377757 (-)
LOC122350872 soat1,LOC107657858,LOC107758003,LOC107700347 coding downstream 10091 7363235 ~ 7370455 (-)
cep350 cep350 coding downstream 211754 7137062 ~ 7168792 (-)
qsox1 qsox1,LOC107665072,LOC107755296,LOC107758006,LOC107699344,LOC107603198 coding downstream 245050 7112136 ~ 7135496 (-)
sin3b sin3b,LOC107755301,LOC107758010,LOC107699271 coding downstream 505581 6860907 ~ 6874965 (-)
LOC122350867 bcar3,LOC107707585,LOC107599011,LOC107657879,LOC107699431,LOC107603218,LOC107757998 coding upstream 212171 7594983 ~ 7652306 (-)
LOC122350881 agbl4,LOC107657883,LOC107603279 coding upstream 306049 7688861 ~ 7740456 (-)
bend5 bend5,LOC107707580,LOC107757978,LOC107700377,LOC106584333 coding upstream 367603 7750415 ~ 7763209 (-)
agbl4 agbl4,LOC107603279,LOC106613892 coding upstream 653810 8036622 ~ 8137275 (-)
dmrta2 dmrta2,LOC107657863,LOC107707574,LOC107699532,LOC107743899,LOC106613895 coding upstream 889672 8272484 ~ 8275399 (-)
LOC122350886 NA non-coding downstream 2087 7377755 ~ 7378459 (-)
G61865 NA non-coding downstream 72206 7306112 ~ 7308340 (-)
G61860 cacna1e,LOC107707593,LOC107657843,LOC107599003 non-coding downstream 99381 7274590 ~ 7281165 (-)
G61782 NA non-coding downstream 517592 6862028 ~ 6862954 (-)
G61663 NA non-coding downstream 722262 6657498 ~ 6658284 (-)
LOC122350888 NA non-coding upstream 7476 7390288 ~ 7394209 (-)
G61868 abl2,LOC107599009,LOC107699422,LOC107657876,LOC107707589,LOC107603207 non-coding upstream 162998 7545810 ~ 7548323 (-)
G61959 NA non-coding upstream 279405 7662217 ~ 7663259 (-)
G61965 NA non-coding upstream 366891 7749703 ~ 7778564 (-)
G61967 NA non-coding upstream 496605 7879417 ~ 7974020 (-)
lhx4 lhx4,LOC107699337,LOC107550233,LOC107758007,LOC107599001,LOC107755297,LOC107665078 other downstream 277553 7091450 ~ 7102993 (-)
xpr1a xpr1a,LOC107758009,LOC107755298,LOC107699288,LOC107665065,LOC107603171,LOC107599040 other downstream 324117 6875349 ~ 7056429 (-)
LOC122350104 LOC107755295,LOC107665061,LOC107598999 other downstream 563799 6814471 ~ 6816747 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other downstream 937564 6423742 ~ 6442982 (-)
LOC122350596 LOC107557202,LOC107757303,LOC107725315,LOC107674335 other downstream 1419440 5919961 ~ 5961106 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other upstream 294684 7677496 ~ 7687562 (-)
LOC122350139 elavl4 other upstream 734196 8117008 ~ 8232774 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other upstream 1009533 8392345 ~ 8416553 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other upstream 1264458 8647270 ~ 8649983 (-)
pola2 pola2,LOC107599808,LOC107657899 other upstream 1269492 8652304 ~ 8657286 (-)

Expression


Co-expression Network