zgc:92140 (zgc:92140,LOC107676598,LOC107585858,LOC107717558,LOC107700167,LOC107548740,LOC107750760)


Basic Information

Item Value
gene id zgc:92140
gene name zgc:92140,LOC107676598,LOC107585858,LOC107717558,LOC107700167,LOC107548740,LOC107750760
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9581828 ~ 9605966 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247809.1
GGCTTCAGCAAGATGGCTGCAGTTCTTCGAGCAAATCAGGAGTGCAGGCTGTAAGCCAGCGGTCCACATCACTACAGCAGCGCTTATTCCGTCTGCGTGTGTAGTgcgtgtagtgtgtgtgtgcgtgcgtgtgtgtttatgtgtgtatgtgagccGCCGCCAGTGGACCGAGCGGGTCACTTCTGACAAgTGAGATGGTGAGATGGTGAGAGGGGGGAGGGAGTGAGGCCATGGGCTGCACCTCGGCTAAGCAGGTGTCGGCTGTGCCCAACGACGAAGAGGGCCGGGGCAAAGCCTACAGCAACGGAGACCTCTTCACcgATGAATATAAGATGAAGGGAGTGGAGGAGGTGAAGTACATGCGTGGAGAAGAAGACAGAGTAAACGCACGCAACCAGGAGAACCTGGAGAAGAGCTCGACGCAGCACAGGACCAAACAGCACAAAGAGGTGCCTGGGCCCAGCGCCAACAAGACGAAcatACATACGTCAGAGAGTCAGCAGGAGTTCTTCAGAATGCTGGATGAGAAGATTGAGAAGGGGCGGGATTACTGctcggaggaggaggaggaggatgtgACATAGCAGAGAGGCGCCAGATCTTGCCAGAGATGGAAATAGAGAGTGtgaactcaaaaaaaaaaaaaaatcagtgtttcCTATGTCTGTAACACTCTGTCGGTCTGAGAGCGAGTGTGCGTGCGAGTGCGTGAGAGTGTATgattgtgagagagagagagaatgcaggACTTTTCCTCATAGGCTGTTGCACCCTTGACCCCTTCTCCTCTCTTGGGGTTGCCTTGCTGGGAGATCTAGATGGTTTTGGGTGAAGAAAGAACAGCTTGATTGATGTATTATCAACACGGACTCACTCTGACGTGAAATGAGGACCCCCGTCCCCCTCCACTCCTCCTATGGCCAGCAATGAAACGGCCCCCTCGCTCCGCCTGGCTGTGACGAAGccatctgagagagagaaggagagattaTGTCGAGGAAAGCGAGATGAAAGGAtacggagagagaaaaagatgacATGCCCCTCCCAGTCCTCGTTTTAAGTGGCAGGACAGAGAAAAAACTGACATATGGAGGAACCAGAAGAGAGCTTACGAACATCCTCTGGAGATAACGGGGAGTGAATGTAAAGATGGagtgttgtgtgtttttggggGAGAAATTATTGAACaagaaagatattttattaAGAGCGACTATATGAACGAACTGGCTGATTATTTTGATAAGAGCGTTGCGGCAAGTTTTTGAACATTTGAGTTTGGACTCCTGCCTTTTGAAGGACCTTTTTTAATTTCCTCAagattgatttgtttgttccataaatgtttttttttttttttttttcgcttgtTGCTTAGATCATACCTCTTCAAGCTTGTGCTGTAAAGGTCAGGGCTGTACGGTGACCCCAtaacacactcgctcacacacacggaAAGTCTTAAAGCTAAAATTATCACCACACCCTCTTTCCACACACAGGTTCACACTTTCATTTTGTATAtcctgctattattattatataaagttCTAAGAAAATAGACGGAAATACTGTCAGACTAGTTACCCCCACACACATCCAAATATATACCCGGCAAAACCGGCAACATTTAACTTAAAGATCCATATTGACCGTTTATGCTGCCCTTTAATACAGGTAATGGACTGTGAAGAGACTATGGCAGATAACTGGGGTTGTCTGTGTTGTGTCGAGGGCTGTATTTGTGTTAATCTGTGTCAGAGAACCAGGTCTTACTGTGTTAATCTTTGTCAAAGGGATGAGGTGTTTGTCTTAGGCCTGTATGTGTTTAGCTAGTGTTTACCTATGTTTCCCACCCTGCCTTTCTTACTCAGACGTATTCAGTGTTGGCTTAAATTAATTATCTTTGTCTCTTATCATTCATAGACCTATTCTAGACCTTAGTAGTATGAGGTGGGGTGGGGTCACTTTTTTGAGGGGGACAGCGCTGGCCGAGCATTTGTCATTATGATTACTGGATTgattcctttttcatttttattttcaatgttttctttttctattaaaatataagacACAGGAGCTGTGGTTTCTGTGTGCTGTCTCACCGA
>XM_043247810.1
GCTTGGTGATCTGTTTAAAGTGGGACGGGGAGTTGATGCTACAGCCGTTGCGGgTGAGATGGTGAGATGGTGAGAGGGGGGAGGGAGTGAGGCCATGGGCTGCACCTCGGCTAAGCAGGTGTCGGCTGTGCCCAACGACGAAGAGGGCCGGGGCAAAGCCTACAGCAACGGAGACCTCTTCACcgATGAATATAAGATGAAGGGAGTGGAGGAGGTGAAGTACATGCGTGGAGAAGAAGACAGAGTAAACGCACGCAACCAGGAGAACCTGGAGAAGAGCTCGACGCAGCACAGGACCAAACAGCACAAAGAGGTGCCTGGGCCCAGCGCCAACAAGACGAAcatACATACGTCAGAGAGTCAGCAGGAGTTCTTCAGAATGCTGGATGAGAAGATTGAGAAGGGGCGGGATTACTGctcggaggaggaggaggaggatgtgACATAGCAGAGAGGCGCCAGATCTTGCCAGAGATGGAAATAGAGAGTGtgaactcaaaaaaaaaaaaaaatcagtgtttcCTATGTCTGTAACACTCTGTCGGTCTGAGAGCGAGTGTGCGTGCGAGTGCGTGAGAGTGTATgattgtgagagagagagagaatgcaggACTTTTCCTCATAGGCTGTTGCACCCTTGACCCCTTCTCCTCTCTTGGGGTTGCCTTGCTGGGAGATCTAGATGGTTTTGGGTGAAGAAAGAACAGCTTGATTGATGTATTATCAACACGGACTCACTCTGACGTGAAATGAGGACCCCCGTCCCCCTCCACTCCTCCTATGGCCAGCAATGAAACGGCCCCCTCGCTCCGCCTGGCTGTGACGAAGccatctgagagagagaaggagagattaTGTCGAGGAAAGCGAGATGAAAGGAtacggagagagaaaaagatgacATGCCCCTCCCAGTCCTCGTTTTAAGTGGCAGGACAGAGAAAAAACTGACATATGGAGGAACCAGAAGAGAGCTTACGAACATCCTCTGGAGATAACGGGGAGTGAATGTAAAGATGGagtgttgtgtgtttttggggGAGAAATTATTGAACaagaaagatattttattaAGAGCGACTATATGAACGAACTGGCTGATTATTTTGATAAGAGCGTTGCGGCAAGTTTTTGAACATTTGAGTTTGGACTCCTGCCTTTTGAAGGACCTTTTTTAATTTCCTCAagattgatttgtttgttccataaatgtttttttttttttttttttcgcttgtTGCTTAGATCATACCTCTTCAAGCTTGTGCTGTAAAGGTCAGGGCTGTACGGTGACCCCAtaacacactcgctcacacacacggaAAGTCTTAAAGCTAAAATTATCACCACACCCTCTTTCCACACACAGGTTCACACTTTCATTTTGTATAtcctgctattattattatataaagttCTAAGAAAATAGACGGAAATACTGTCAGACTAGTTACCCCCACACACATCCAAATATATACCCGGCAAAACCGGCAACATTTAACTTAAAGATCCATATTGACCGTTTATGCTGCCCTTTAATACAGGTAATGGACTGTGAAGAGACTATGGCAGATAACTGGGGTTGTCTGTGTTGTGTCGAGGGCTGTATTTGTGTTAATCTGTGTCAGAGAACCAGGTCTTACTGTGTTAATCTTTGTCAAAGGGATGAGGTGTTTGTCTTAGGCCTGTATGTGTTTAGCTAGTGTTTACCTATGTTTCCCACCCTGCCTTTCTTACTCAGACGTATTCAGTGTTGGCTTAAATTAATTATCTTTGTCTCTTATCATTCATAGACCTATTCTAGACCTTAGTAGTATGAGGTGGGGTGGGGTCACTTTTTTGAGGGGGACAGCGCTGGCCGAGCATTTGTCATTATGATTACTGGATTgattcctttttcatttttattttcaatgttttctttttctattaaaatataagacACAGGAGCTGTGGTTTCTGTGTGCTGTCTCACCGA

Function

symbol description
zgc:92140 Orthologous to human C1orf21 (chromosome 1 open reading frame 21).

NR:

description
uncharacterized protein C1orf21 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247809.1 True 2114 mRNA 0.46 6 9581828 9605966
XM_043247810.1 False 1978 mRNA 0.45 6 9581828 9598363

Neighbor

gene id symbol gene type direction distance location
colgalt2b colgalt2,LOC107751084,LOC107700142,LOC107585927,LOC107676963,LOC107717557 coding downstream 1975 9562094 ~ 9579853 (-)
rgl1 rgl1,LOC107750730,LOC107717560,LOC107657943,LOC107700121 coding downstream 29524 9528966 ~ 9552304 (-)
plin3 si:rp71-61h23.4,LOC107657942,LOC107717561,LOC107750720,LOC107700160,LOC107549942 coding downstream 55767 9521721 ~ 9526061 (-)
zgc:77486 zgc:77486,LOC107585855,LOC107717563,LOC107657940 coding downstream 61075 9513951 ~ 9520753 (-)
abhd17ab abhd17ab,LOC107700092,LOC107717562,LOC107548688,LOC107657939,LOC107750691,LOC107585854,LOC105895145 coding downstream 70193 9504012 ~ 9511635 (-)
edem3 LOC107717559,LOC107585860,LOC107750782,LOC107548759,LOC107700180 coding upstream 539 9606505 ~ 9618126 (-)
trabd2b si:ch211-120j21.1,LOC107717551,LOC107585868,LOC107676673,LOC107695245,LOC107548850,LOC108442342 coding upstream 180286 9786252 ~ 9837450 (-)
lpxn LOC107676702,LOC107717550,LOC107585869,LOC107695247,LOC107750911 coding upstream 246266 9852232 ~ 9856606 (-)
rfx2 rfx2,LOC107676724 coding upstream 294530 9900496 ~ 9933011 (-)
acer1 acer1,LOC107731201,LOC107676796,LOC107585930,LOC107550428 coding upstream 364162 9970128 ~ 9976762 (-)
G62525 NA non-coding downstream 54862 9526627 ~ 9526966 (-)
G62519 NA non-coding downstream 167389 9408414 ~ 9414439 (-)
G62293 glis1,LOC102303521 non-coding downstream 496634 9082795 ~ 9085194 (-)
G62250 dio1,LOC107700640 non-coding downstream 543128 9030865 ~ 9038700 (-)
G62263 lrriq3,LOC107657910,LOC107585823,LOC107699824,LOC107548466 non-coding downstream 574723 9006834 ~ 9007105 (-)
G62564 NA non-coding upstream 96993 9702959 ~ 9703191 (-)
G62565 NA non-coding upstream 97410 9703376 ~ 9703598 (-)
G62567 NA non-coding upstream 103007 9708973 ~ 9709221 (-)
G62568 NA non-coding upstream 104680 9710646 ~ 9710996 (-)
G62576 NA non-coding upstream 125940 9731906 ~ 9732154 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other downstream 319002 9257243 ~ 9262826 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 924542 8652304 ~ 8657286 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other downstream 931845 8647270 ~ 8649983 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 1165275 8392345 ~ 8416553 (-)
LOC122350139 elavl4 other downstream 1349054 8117008 ~ 8232774 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other upstream 94428 9700394 ~ 9708621 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 348715 9954681 ~ 9969485 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other upstream 389581 9995547 ~ 10041769 (-)
smim24 smim24,LOC107580287 other upstream 639230 10245196 ~ 10248156 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other upstream 783217 10389183 ~ 10392043 (-)

Expression


Co-expression Network