Gene
RNA
| Item | Value |
|---|---|
| gene id | G38421 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000005 |
| NCBI id | null |
| chromosome length | 7630583 |
| location | 4209148 ~ 4215199 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU43548 | True | 5695 | lncRNA | 0.38 | 2 | 4209148 | 4215199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000005_04161239_04162612 | NA | coding | downstream | 45902 | 4160972 ~ 4163246 (-) |
| CI01000005_03986570_03989555 | PRPH2B | coding | downstream | 219593 | 3986099 ~ 3989555 (-) |
| CI01000005_03714714_03715575 | NA | coding | downstream | 493507 | 3714273 ~ 3715641 (-) |
| CI01000005_03530548_03573901 | NA | coding | downstream | 634367 | 3530249 ~ 3574781 (-) |
| CI01000005_03494256_03497235 | QKI | coding | downstream | 710131 | 3494077 ~ 3499017 (-) |
| CI01000005_04296779_04299727 | NA | coding | upstream | 81439 | 4296209 ~ 4299810 (-) |
| CI01000005_04332499_04357527 | XPO5 | coding | upstream | 117291 | 4332490 ~ 4358857 (-) |
| CI01000005_04401277_04428207 | NA | coding | upstream | 186049 | 4401248 ~ 4428207 (-) |
| CI01000005_04443111_04445092 | NA | coding | upstream | 227854 | 4443053 ~ 4445092 (-) |
| CI01000005_04624198_04638644 | NA | coding | upstream | 408797 | 4623996 ~ 4638644 (-) |
| G38511 | NA | non-coding | downstream | 28 | 4206319 ~ 4209120 (-) |
| G38508 | NA | non-coding | downstream | 4533 | 4204247 ~ 4204615 (-) |
| G38509 | NA | non-coding | downstream | 5018 | 4203859 ~ 4204130 (-) |
| G38413 | NA | non-coding | downstream | 14163 | 4191510 ~ 4194985 (-) |
| G38411 | NA | non-coding | downstream | 18443 | 4190451 ~ 4190705 (-) |
| G38512 | NA | non-coding | upstream | 73 | 4215272 ~ 4215538 (-) |
| G38517 | NA | non-coding | upstream | 11527 | 4226726 ~ 4228565 (-) |
| G38530 | NA | non-coding | upstream | 93762 | 4308961 ~ 4309174 (-) |
| G38537 | NA | non-coding | upstream | 151317 | 4366516 ~ 4368007 (-) |
| G38510 | NA | other | downstream | 2940 | 4204845 ~ 4206208 (-) |
| CI01000005_01883894_01899867 | NA | other | downstream | 2319872 | 1883222 ~ 1899867 (-) |
| G36628 | NA | other | downstream | 2544869 | 1663267 ~ 1664279 (-) |
| G36049 | NA | other | downstream | 3165476 | 1021295 ~ 1043672 (-) |
| G38415 | NA | other | upstream | 166039 | 4381238 ~ 4401110 (-) |
| G39515 | NA | other | upstream | 1618593 | 5833792 ~ 5834539 (-) |
| CI01000005_06481721_06483251 | NA | other | upstream | 2265490 | 6481355 ~ 6483265 (-) |
| G40487 | NA | other | upstream | 2980596 | 7195795 ~ 7196428 (-) |
| G40540 | NA | other | upstream | 3311022 | 7526221 ~ 7532148 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| eurasian perch (Perca fluviatilis) | G51468 | NA | non-coding | NC_053116.1 | CM020913.1 | 20063108 ~ 20063536 (-) |
| mexican tetra (Astyanax mexicanus) | G53185 | LOC108430338 | non-coding | NC_035902.1 | CM008305.1 | 18778714 ~ 18786708 (-) |
