G137898


Basic Information

Item Value
gene id G137898
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1879072 ~ 1879392 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186581
ctttgaagagctctgtcttcaggagtttattaaagatagcgagagattctcctgatctggtagtagaaggtagtttgttccaccattggggaactctgtatgagaacagtctggattgctttgtgtgaatgtttgtttggtaaagcgaggcgacgttcattggaggagcgcagcggccgggaggtagcgtaagtcttcaggagcgagtgcaggtagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186581 True 218 lncRNA 0.48 2 1879072 1879392

Neighbor

gene id symbol gene type direction distance location
kdsr kdsr,LOC106569188,LOC102792240 coding upstream 18557 1855297 ~ 1860515 (+)
LOC103043726 LOC103043726,LOC105899208 coding upstream 61860 1810725 ~ 1817212 (+)
tsc22d2 NA coding upstream 76753 1777225 ~ 1802319 (+)
LOC111194259 NA coding upstream 132834 1740171 ~ 1746238 (+)
LOC103022156 NA coding upstream 143169 1723535 ~ 1735903 (+)
dpp6 LOC108430761,LOC108267703 coding downstream 222829 2102221 ~ 2230065 (+)
LOC103042593 LOC108430758 coding downstream 442646 2322038 ~ 2362870 (+)
LOC103040438 pcyt1a,LOC103040438,LOC108430756,LOC108267677,LOC107709348,LOC107671662,LOC107727528 coding downstream 516565 2395957 ~ 2405369 (+)
LOC103040954 anxa13,anxa13l,LOC103040954,LOC107727547,LOC108267681,LOC107559374 coding downstream 543516 2422908 ~ 2431028 (+)
LOC103041271 LOC108430753 coding downstream 585939 2465331 ~ 2473513 (+)
G137889 NA non-coding upstream 69460 1808205 ~ 1809612 (+)
G137890 NA non-coding upstream 72892 1804927 ~ 1806180 (+)
G137827 pfn2,pfn2l,LOC107681776 non-coding upstream 108882 1762038 ~ 1770190 (+)
G137880 NA non-coding upstream 158118 1720742 ~ 1720954 (+)
LOC111194188 NA non-coding upstream 242407 1633487 ~ 1636665 (+)
G137831 NA non-coding downstream 36755 1916147 ~ 1918411 (+)
G137902 NA non-coding downstream 42161 1921553 ~ 1924855 (+)
G137917 LOC108430762,LOC108267465 non-coding downstream 108422 1987814 ~ 1988466 (+)
G137930 NA non-coding downstream 145801 2025193 ~ 2028808 (+)
G137943 LOC108430760 non-coding downstream 327975 2207367 ~ 2237690 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other upstream 27759 1835477 ~ 1851313 (+)
G137826 LOC108430781,LOC108267757 other upstream 379116 1491816 ~ 1499956 (+)
mrps14 mrps14 other upstream 839102 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 890434 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 1097876 762715 ~ 781196 (+)
G137929 NA other downstream 143363 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1021083 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1202664 3082056 ~ 3084865 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other downstream 1236028 3115420 ~ 3119488 (+)
LOC103047488 pls1,LOC108437523,LOC107722705,LOC107656864,LOC107565818,LOC107599860,LOC107709028,LOC107681752 other downstream 1922461 3801853 ~ 3839372 (+)

Expression


Co-expression Network