LOC103024602 (abhd2a,LOC108428500,LOC108270704,LOC107685211,LOC107733946,LOC107737001,LOC107662289)


Basic Information

Item Value
gene id LOC103024602
gene name abhd2a,LOC108428500,LOC108270704,LOC107685211,LOC107733946,LOC107737001,LOC107662289
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 1123343 ~ 1153288 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260228.3
GGTGGGAGAgtggaggagggagggagaagCTGCTAGAAGGGAAGGGCGGAtaataatgctgctgctgcttctgctgtagCGAACAGGCAGGTTCATTAATGGAAAGGTACAGAGACAGCTGAGATATACCTGTATGTGGGGAGAGGATCCGCTGGGGAAAGCCTCGCTGGAACAGTTTGGACCGAAACACTGTGACCAAAACCCCCGCAAGTGCGACTTCTTAGTCCAAGCACAAGAGATTACATTCTAGAAGTCAACTGAAGCAACAAAGCCAGCCATGTCAACTCACGATTCAGAGGTGTACACGGTGGCACCGGAGATGCCAGCCATGTTTGATGGGATGAAGCTGGCGGCCGTTGCCACCATCCTCTACGTCGTCGTCCGGTGCCTCAACCTGAAAAGCCCCACAGCCCCTCCAGACCTCACCTACCAGGACACAGCGCTCAACCGCTTCCTGCTAAAGTCCTGCCCCCATCTGACCAAAGAATACATTCCTCCTTTGTTGTGGGGAAAAAGTGGCCATTTGCAGACTGCCCTGTACGGCAAGCTGGGCAGGGTCAGTTCACCCCATCCGAAAGGCCAACGCAAGTATCTGCCTATGCAGGATGGCGCCACATCGACTTTTGACCTCTTTGAGCCTTTGGCGGATCATCAGAGCGGAGCTGACATCACAATGGTGATTTGTCCGGGGATCGGGAACCACAGCGAGAAGCACTACATCCGCACGTTCGTGGATTACTCGCAGAAACAAGGCTACCGCTGTGCTGTGCTCAACCACCTTGGGGCCTTGCCAAACATCGAGCTCACCTCTCCCCGCATGTTCACCTATGGCTGTACATGGGAGTTCGCATCCATGGTCGGCTACATCAAGAAGATGTATCCCCAGACCCAGCTGATCGTGGTGGGTTTCAGCCTTGGGGGCAACATCGTCTGCAAGTTCCTGGGAGAGAACCGTGCCAACCAGGAGCGAGTGCTGTGCTGTGTGAGCGTCTGTCAGGGCTACAGTGCACTCAGGGCTCAGGAGACCTTCCTGCAGTGGGACCAGTGCCGGCGCTTTTATAACTTCCTCATGGCAGACAACATGAAGAAGATCATCCTGTCCCACAGGGGTAGCCTGTTTGGGGGAGGTTCTCCAAAGATGGCCGATGCGGATCTGAGACGCCTCTACACCGCCACATCCCTCATGCAGATTGACGACAACATCATGAGaAAATTCCATGGCCACAATTCCTTAAAAGAGTACTATGAGAAAGAAAGCTGTGTCCATTTCATTCACAACGTCAATGTTCCACTGTTGCTGGTGAACTCTGCTGATGATCCTCTCGTTCACGGCTCTTTACTCACCATTCCTCGCACCCTTGCAGaaaagaaagagaatgtcGTTTTTGCCCTCACGTTGCACGGCGGGCACCTGGGCTTCTTCGAGGGTGCTGTTCTGTTTCCTCAGCCTCTTACCTGGATGGACAAGGTCATCGTGGGTTACGCCAACGCCATGTGTCAGTGGGAGAAGCAGAAGCCAGCGTGCAAAAGCCAGGGCGCtcacaacacagagaccaaatGCTCGGACAGTACATCTTAACCTTTCACCTCCTTCACTCCATGACCGCTCgccctccatacacacacacatatatacatacatatacaaacacatacataccaTTCTGACCACTCTAACCTACCACAAGTCagtcacaacacacacacacgtgctttttaaaaaaaaggacgAGTAGGTAGCCTTTCCAGAGCAAGAAAAACGACAGGGAAAAAAGCGTAATGACCAAAAAACGAGCAGACTCATGCCGAGCGCTGGGTACACAGTAGTACACAGTCTGTAGTCCAGATTAGATACGTAGATTCACACGGACTCTTGATTAGCGATTATTGTGCTACATATAGGAGAGAAAAGGACGCTCAGCAACTCGCAGCTGCTTGTGTGGAAATGCTTCATTACAAGCAGCTGCTGTGGACCATCACATCACACCTCTCTGTACTCTGTATTTAACCAGCGTAGAACGGCGGTTATGCAGGCACTGTGTGCTTATAGCTAGAACAGACATGCTGCTGGTTTGCCTCTTCTGTTGGGTACTTCGTTCTTCATAGTTCGCTGCTGTTAAACGTGCTCTCCGGTCAGACCCTGTCAGATTTTTCATTGCTCTTTGAATTGCACAATTGTTAAAGAACAAACACACCACCAACAGATTCTGTCAACTCAACTGGTGGAACTGATTCCAACTTTATTTAGATTCCTCCGTTTGATGAcatccttaatttttttttcatatatatgttaatgttttaattaaaaggaCACTTCAGTGTTTTCAGTCTGAAAAATCAATCTCCATCTGCTGCATCTGTAGCTTTGGATTGACTACCAGAAGCATGAAGGGGAAAAAAGACACAGTTAAAGCCAACTGAAAGCTGAAAGATTTTTTAGCTGctgatattttttctaatttctgtatattttgttcACCTTTATTGTTGAGGTGGTGagtgtaaaagaaaagaaaaactgctACAGTGGTTTGACCCTGAGGATTGAcactttgttttaaatatttaaaagatttaaagatttaaaatttGGCCTACAgtgtatttgttaaaaaatacattcagaCTGCAAAGAATGCAACAACAGTCATTGAGCaacaaattagaaaaataaaaaatgcagccCCTTGCGCAACAAAGTAGTCAGTCCATCCCTTTTCTTAATGGTAATTATTATATAGAAATTCCCACACACTACAATTACATACTACCAATTGTGTCCATTGGGTTTGGATAGAAAATAAAATGGCTATATTAAGAAATTCAGctatttcacaccaaaccctgcttagctgcAGCAGAGCTGCTCAAGCTATCGAAACAGAATACTGGATTGGACTTTTTGTTTTCTGGAGTTGCAGCAGATGGAAACTAGGTTGAAAAAAACTTGAGTGCTcctttataatattaaaagcactttatattattttatttgccaTATTCATTGACTAATTAGCAGAGATTTGAAGATTAAACCAGAGACTAGTTGAGAAAAGTATATAATGCAACAAGAGAACTAAATGGAGGAAGGAGAGATGTTCACACTAAGTGACTAAATGACTCTATGATCCCTTATGTTCACCAAAGCCTGttgcgtttcttttttttatgtataaaaaaagagtagccaTGTAGTTCACTGTTTGGGACATTTGTCTCTGTCTCAGCATGTCTTGGACACCTATGAATGTGTCTTAGGTTGTTGAGCACTGTTGATAACGCCGTTCTGATCTGCAGTTGTTTGGTTAAGAGTTTGGTTGTGGAGCTGTAGGTCCAGCAGGAGACGTCAGTGCACATGTTTTGAACTTTGCGTCTGTGAAAGCTGGCTTGTTTGGTTAAACTCTGTTCACTCTGTACAGTGTGCTCGAGGATCAGGCTGGATGTTTGTCTGGGTGTCCGTTTTGTGTTGCAGTAGATGTGAGATGAAGTGTCTTGGTTTGCAGCGCCCCCTGCTGCCAGATTTTGTATTTgatttgaaaagaaaaaggacATTTGTAGATGAACAGGAACAGTCAagggaagtaaaaaaaaaaaggcaaagctACAGTCTTACCTTAATAAAGGTGATTCAGATGTTTCTTTGAGTGATGCTATAGAAGAACTGCTTCTAATCCATTTCAAGTTTGAAGTACCTTCGAAACGTCTGAAGCATCTTCACTTAACGTTCCTGAAAGTTCTTTAGCAGCTTAAAAGTTTTTTCACACTTAAGACTTTTATGGATCACTTGTGGTAAACATGTGAAGCACTTTTAAGAGTGTAAGATGGAGAGAACAGTACAGAAAAGCAGTTTTGGGACACTGTGGATAACAAGCTTTTGCTGGAGTATCTGTTCAAACATTTATAGGAATTATTTGGctataacaaacaaaaacaaaccaaaaaacaatataaaataaataaatggacactaatttattttattaatgttctaaaaaatattgtttcatGAAAGTAATTTACATTGATTTCTTTGTAACTGGGATCcactgaaataaaatcaaacaaccaaacaaataaaaaattttttgcactggtt

Function

symbol description
abhd2a Predicted to enable carboxylic ester hydrolase activity; hormone binding activity; and steroid hormone receptor activity. Predicted to be involved in several processes, including medium-chain fatty acid metabolic process; response to steroid hormone; and sperm capacitation. Predicted to act upstream of or within lipid catabolic process. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in sperm flagellum and sperm plasma membrane. Orthologous to human ABHD2 (abhydrolase domain containing 2, acylglycerol lipase).

NR:

description
PREDICTED: monoacylglycerol lipase ABHD2-A

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13697 ABHD2; abhydrolase domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260228.3 True 4099 mRNA 0.44 12 1123343 1153288

Neighbor

gene id symbol gene type direction distance location
rasl12 rasl12,LOC107600716,LOC107685213,LOC107737003,LOC107594763 coding upstream 31176 1082551 ~ 1092167 (+)
ubap1l ubap1l,LOC107096871,LOC103363109,LOC105018181 coding upstream 51727 1048244 ~ 1071616 (+)
clpx clpx,clpxa,LOC107733949,LOC107737000,LOC107594724,LOC107600713 coding upstream 86409 1011639 ~ 1036934 (+)
ankdd1a ankdd1a,LOC107685207 coding upstream 123059 974937 ~ 1000284 (+)
immp1l immp1l,LOC107594745 coding upstream 441721 671881 ~ 681622 (+)
ap2a2 ap2a2,LOC106562310,LOC106587467 coding downstream 6484 1159772 ~ 1194746 (+)
LOC103026058 NA coding downstream 139501 1292789 ~ 1306241 (+)
sdhaf2 sdhaf2,LOC107685224 coding downstream 287467 1440755 ~ 1445223 (+)
rplp2 rplp2,rplp2l,LOC107662341,LOC107591317,LOC100691806,LOC102784189,LOC101463883 coding downstream 547549 1700837 ~ 1705998 (+)
LOC103030943 NA coding downstream 656314 1809602 ~ 1836384 (+)
G39539 NA non-coding upstream 156015 964928 ~ 967328 (+)
G39529 NA non-coding upstream 243447 879685 ~ 879896 (+)
G39512 NA non-coding upstream 355729 767338 ~ 767614 (+)
G39511 snrpa1,LOC106587741 non-coding upstream 369506 750822 ~ 753837 (+)
G39506 NA non-coding upstream 372723 745568 ~ 750620 (+)
LOC111192491 NA non-coding downstream 256 1153544 ~ 1159078 (+)
G39616 NA non-coding downstream 32284 1185572 ~ 1186479 (+)
G39621 NA non-coding downstream 55994 1209282 ~ 1209733 (+)
G39622 NA non-coding downstream 56676 1209964 ~ 1214713 (+)
G39625 slc38a7,LOC107711584,LOC107596460,LOC107683258 non-coding downstream 63014 1216302 ~ 1218795 (+)
pdcd7 NA other upstream 77996 1038573 ~ 1045347 (+)
plekho2 NA other upstream 160059 922757 ~ 963284 (+)
commd2 commd2 other upstream 832321 281585 ~ 291022 (+)
G39619 mrpl21 other downstream 53499 1206787 ~ 1209096 (+)
G39626 NA other downstream 66518 1219806 ~ 1220486 (+)
LOC111192492 NA other downstream 112569 1265857 ~ 1268385 (+)
LOC111192494 NA other downstream 257142 1410430 ~ 1413799 (+)
polr2l NA other downstream 267103 1420391 ~ 1427117 (+)

Expression


Co-expression Network