G77566 (acp7)


Basic Information

Item Value
gene id G77566
gene name acp7
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 2399999 ~ 2452445 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104602
GTCGTAGGCAAAGTCCCCTATGTGCAGGATGGCGTCGTACATCCCAGCCTGGGTCTCTTTCTGCAGTCGGGCGAGTGACTGAGGGTTTTCATTGCCCATGTCACCAAACAAAGCAAATCTGGGGCTAAAGCTGGCACTCTCGTTTAGAGCAGTAAAGTAGAAAAGATCACTCCAGCCTTCCTCACTGCCACAGTGATAGACGTATGTAGACCCAGGCCTCAGATCTGACAGGGTGACTCTATGAATGTACAGTTTCCTCTTCTCTGTCCCTCCATCAACAAACAGTGTGGAAATTCCTTTTGCAGactgagtaaagagcttcccaCCCCACAGATTATACTCCACCATGCTGTCTGTCTTATCAAAGGTTGTCCAAGTGATCACCATTGATCCCTTTACACCTGGATAGGATATGTGCACCTGCTCAGGTTGGGTCCAAATGGGCGGCACACATAATGCCACAGGCATCAGTCcacagaaagataaaaaaaaaagaaacagaggggCCATCCTTTCCTTTATTCTCCTGTTCTTGTCTCAGGCACCTGGATAGTGGAATAGAGAAGACTGAGACAGAGAGGAAATCTTCACTTTGCTTGTCAAATAGTGACAAAAATCACATGATCTGCTGTATAAGCGCTTCCTGGTGTCACATGATCACAGTCCAAT
>TU104603
ACCTGGATATGATATGTGCACCTGCTCAGGTTGGGTCCAAATGGGCGGCACACATAATGCCACAGGCATCAGTCcacagaaagataaaaaaaaaagaaacagaggggCCATCCTTTCCTTTATTCTCCTGTTCTTGTCTCAGGCACCTGGATAGTGGAATAGAGAAGACTGAGACAGAGAGGAAATCTTCACTTTGCTTGTCAAATAGTGACAAAAATCACATGATCTGCTGTATAAGCGCTTCCTGGTGTCACATGATCACAGTCCAAT

Function

symbol description
acp7 Predicted to enable acid phosphatase activity and metal ion binding activity. Predicted to be located in extracellular region. Orthologous to human ACP7 (acid phosphatase 7, tartrate resistant (putative)).

NR:

description
acid phosphatase type 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104602 True 669 lncRNA 0.47 4 2448192 2452445
TU104603 False 270 lncRNA 0.44 2 2399999 2452445

Neighbor

gene id symbol gene type direction distance location
fsip1 NA coding upstream 87337 2247051 ~ 2312662 (+)
dnajc17 dnajc17 coding upstream 253723 2087613 ~ 2146276 (+)
LOC107197725 LOC108430641,LOC108269631 coding upstream 545121 1836789 ~ 1854878 (+)
LOC103033947 LOC107560184,LOC107678711,LOC107726575 coding upstream 568904 1805947 ~ 1831095 (+)
spint1 NA coding upstream 647891 1734621 ~ 1752108 (+)
LOC103026471 LOC100304858 coding downstream 12865 2465310 ~ 2468562 (+)
LOC103026149 LOC108430664,LOC108269450,LOC107567345,LOC107678748,LOC107743909 coding downstream 18953 2471398 ~ 2474791 (+)
LOC103030398 LOC108430666,LOC106610840,LOC105908184,LOC108270264 coding downstream 308225 2760670 ~ 2864439 (+)
eif2ak4 eif2ak4,LOC107673787 coding downstream 456164 2908609 ~ 2957430 (+)
tecpr2 tecpr2,LOC107758275 coding downstream 809346 3261791 ~ 3296653 (+)
G77559 thbs1,LOC107668245,LOC107756566,LOC102310807,LOC101487021,LOC102776654 non-coding upstream 78994 2320215 ~ 2321005 (+)
G77533 NA non-coding upstream 82519 2293289 ~ 2317480 (+)
G77544 NA non-coding upstream 96169 2261986 ~ 2303830 (+)
G77534 NA non-coding upstream 109991 2197010 ~ 2290008 (+)
G77532 NA non-coding upstream 209335 2190322 ~ 2190664 (+)
G77711 NA non-coding downstream 249754 2702199 ~ 2713270 (+)
G77712 NA non-coding downstream 266678 2719123 ~ 2743611 (+)
G77715 NA non-coding downstream 357114 2809559 ~ 2828232 (+)
G77716 NA non-coding downstream 380123 2832568 ~ 2869809 (+)
G77717 LOC108430628,LOC108269477,LOC107745352,LOC107711907 non-coding downstream 417412 2869857 ~ 2870831 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other upstream 390581 1912532 ~ 2009418 (+)
zfyve19 zfyve19 other upstream 691702 1697965 ~ 1708297 (+)
G77471 bub1b other upstream 703018 1693356 ~ 1696981 (+)
c9h15orf52 NA other upstream 836819 1528970 ~ 1563180 (+)
G77410 NA other upstream 914949 1484670 ~ 1485050 (+)
LOC103031026 NA other downstream 6000 2458445 ~ 2464321 (+)
G77722 NA other downstream 447689 2900134 ~ 2978094 (+)
traf3 traf3,LOC107719479,LOC107694716,LOC107733154,LOC107590913 other downstream 869640 3322085 ~ 3359744 (+)
g2e3 g2e3 other downstream 1313335 3765780 ~ 3824872 (+)
G78111 pole2 other downstream 1837062 4289507 ~ 4298184 (+)

Expression


Co-expression Network