CI01000009_01892219_01893628


Basic Information

Item Value
gene id CI01000009_01892219_01893628
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1892219 ~ 1893754 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_01892219_01893628.mRNA
GTGGATTCAGGCTACAGCGAAGCAAAATAATGCAACATCAAGCTTACCAACCTGTTTTGCCCTGTGTTAATAAATATCTGCAATACAGATGGGACAAAAACTGCTATGAGATGCACAGGAGCAAGGTTAAATCCGCAAAACCAACTATCAACACAACTCCCCCGAAAACCTATGGCCATCTACTTGTCAAGTTTAAGAAAAGACAGCTTGAAGAAGAACGGGTTTCGAGAATCGAAAGAGAAAATCAGATGCTTCTTGATAAAATGTCCCATATAATGCAGACCAGCGGGGGAGTTGACTGTAGACATGACTATGTAAAGAAAAGTCTTGGCTCAGAGAAAAGACAGCTGGAGCTGCTTCGCATCGCCAAAGAGAATCAGTGGATCCTTCAGCGTTTGTCCACCTGCAGGCCGCGTTACAGCGTTCACGTGTGGCACGAGCAGTGGCTTAAAAACCTTGAGCTCATGGAGAATATAGGGAGATATCCGCGTCTGTACACCGCACAGAGATCCTCCTTGCCACCAATTTCAGCAGACAGACATGGGAAGGTAGAGAACAAGAAATATGCAAGAAATGAGGATGAACGGTCTGCTAACACTAGGAATGAGATGAAGAAAAATGATGAGAAGACAAAATCTGAATACAAAGTTACATCTGAAGACGAAGCGTAATTCATGCAAGAGTGTAAATCTTAAAGACTTAATTCGTAAAGATGTTTTCTATATGAAAATAGAATTAAATTTTCTTATTAAATTAAGTGATGCTACTGCTTTTGAGCAAGTTTAATGATTTAGCTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_01892219_01893628.mRNA True 797 mRNA 0.41 5 1892219 1893754

Neighbor

gene id symbol gene type direction distance location
CI01000009_01733394_01738937 ITGBL1 coding upstream 152751 1731294 ~ 1739468 (+)
CI01000009_01692563_01725364 ITGBL1 coding upstream 166855 1692563 ~ 1725364 (+)
CI01000009_01570544_01595199 NA coding upstream 296753 1570079 ~ 1595466 (+)
CI01000009_01454610_01484907 NA coding upstream 406391 1453708 ~ 1485828 (+)
CI01000009_01431700_01434463 NA coding upstream 457677 1429873 ~ 1435328 (+)
CI01000009_01897343_01919208 PIKFYVE coding downstream 3589 1897343 ~ 1919516 (+)
CI01000009_01966898_01976924 COQ10B coding downstream 73144 1966898 ~ 1977734 (+)
CI01000009_01990700_01991267 HSP10, HSPE1 coding downstream 96946 1990700 ~ 1991387 (+)
CI01000009_01993176_01999494 MOBL3, MOB4.S, HSPE1, MOB3, HSPE1-MOB4, MOB4 coding downstream 99422 1993176 ~ 1999873 (+)
CI01000009_02028234_02100154 PLCL1 coding downstream 134480 2028234 ~ 2100154 (+)
G51198 NA non-coding upstream 11309 1880711 ~ 1880910 (+)
G51197 NA non-coding upstream 11862 1880111 ~ 1880357 (+)
G51196 NA non-coding upstream 13371 1878637 ~ 1878848 (+)
G51195 NA non-coding upstream 16011 1875982 ~ 1876208 (+)
G51194 NA non-coding upstream 22364 1869642 ~ 1869855 (+)
G51216 NA non-coding downstream 59387 1953141 ~ 1953363 (+)
G51175 NA non-coding downstream 65506 1959260 ~ 1960717 (+)
G51228 NA non-coding downstream 130355 2024109 ~ 2024459 (+)
G51185 NA non-coding downstream 144715 2038469 ~ 2045644 (+)
G51238 NA non-coding downstream 205524 2099278 ~ 2116721 (+)
G51122 NA other upstream 210253 1680146 ~ 1681966 (+)
G50920 NA other upstream 1121986 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 1796432 94371 ~ 97230 (+)
G51274 NA other downstream 361345 2255099 ~ 2350486 (+)
G51529 NA other downstream 1168279 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 1309018 3202207 ~ 3208984 (+)
G53388 NA other downstream 3628488 5522242 ~ 5540638 (+)

Expression


Co-expression Network