CI01000009_02674026_02678655


Basic Information

Item Value
gene id CI01000009_02674026_02678655
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2673802 ~ 2678746 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_02674026_02678655.mRNA
GTATAAGTATGGTTGAGATTGATTTGCATTTCTTTGCATTGAGATTAATAAGCCTGGAAATAATCAGTGTTTTTTTTCCATTTCAGAATGTGTATGGTGTCATTCATGCCATCCAAAATGGGAACAGTGACTTTGAGATGAGACTCTGATACAACTGATGAAGATGAATGTGGAGATACATCTCCATCGCGCCAACAAAACTAAGCTATTCAAGAACACAGACCATGCCCCGTGACAGGTATCACTGGCTGAGAAAGGATTTTATCAGTCTCGAAACTGATTTTCCTGCTATTGGGAATCTCTATTTTTCTGAGAGCTCAATGGCAAACCGTTCACATCCTGAACACAATATTTCTTTCCTGTGTCAAACGTCCACTACAAATGTAGTTCTGCCCATTATCTACACCATCATGTCTCTCACTGGCCTGCCTGGGAATGCTATTTCTCTATGGGTGTTCATGCGCAAGATCGCCATCAAAACGTCCACGCACATCTACCTGATAAATCTGGGGATCTCAAACTTTTTGCTCTGCCTCACCATGCCATTCCAGGCTGCATACTACTCGCTTGGGACCACATGGGACCAACACAGCACCATGTGCCAAATGGCAATAAATGGTCTAACTCCAGTGATCCACATCAACATCTGCATTGGCGTGATGATACTGAGCTGGGTGGCGCTCAGTCGCTTTGCCTCACTAATTCAACATTCCCATGCTGACCGCCCAAGTCGGTGGCTCAAAGTTCTACCCGGAGCCTTCCTTTGTCGAAAACGGCAAGCAAAACTGGCCTATGCACTGTGCCTAATCACCTGGGCTATTGTGGCCATAGCAGTCACATCCTTTGTGGTGCTGTACTCGATCAAGGAGGCTATAAGTGTGAAGGACAGTGATGGAGATGAAGTGTGCTACAGTCCAGCAGTGGAGGTTGGAGGGCAAGGATCTCACATCTTCGCACTAGTGGCCGTTTCATTGTTCTTTGTCTTCTTCCTGCTGGTCTTAAGCGCCTACATGGCAGTGATCAGGCACATCTGGAGGTCCAAGAGAAACGCGGTCATCTCTGACAGGCAGCGAGTCTATGCAAGAGTGTTTCGGAATATCGTTGTCATTAAGGTCGTGCTGGTGGTCTGTCTCCTGCCGCATCACATCTATAAAGCCATCTTTATTAATATTGTCAATGAGCAGTCTTTGTCTACATCACCCACAACAGGTGCTTGCCATCCAATGTCCATGTACGTGGAGATAAAGAGCATCCTCCTCTGTTTAGCATCTCTGCGATGTAGCACAGACCCCATCATGTACTTCTTGCTGGACAAGACGTTTCGTAAGCATGCGCTTAGCCTGTTGAGATTACACGCTAGCTCAAACGACAGTCAGACATCGAAGTCTAATGTGGGACAGTTATCAACAACTGGGCATCTTTAGACATTACTTGAGAGGATACTGTACGCTGACACAAAGGAGTCTCATTGTGAACGATGTTCCCTCACAGCTGAACAAATGGCCACACACACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_02674026_02678655.mRNA True 1515 mRNA 0.46 2 2673802 2678746

Neighbor

gene id symbol gene type direction distance location
CI01000009_02667840_02668883 NA coding upstream 4638 2667442 ~ 2669164 (+)
CI01000009_02656782_02657768 NA coding upstream 15979 2656557 ~ 2657823 (+)
CI01000009_02615073_02617401 NYX coding upstream 55607 2614656 ~ 2618195 (+)
CI01000009_02601021_02609375 DDX3X, DDX3A coding upstream 64425 2601021 ~ 2609377 (+)
CI01000009_02596511_02597101 NA coding upstream 76690 2595966 ~ 2597112 (+)
CI01000009_02713403_02713914 NA coding downstream 34212 2712958 ~ 2713998 (+)
CI01000009_02799246_02827589 NA coding downstream 120285 2799031 ~ 2827640 (+)
CI01000009_02918681_02973307 KDM6A coding downstream 239935 2918681 ~ 2973952 (+)
CI01000009_03123137_03137452 CCDC80 coding downstream 443370 3122116 ~ 3138311 (+)
CI01000009_03145417_03159851 F5 coding downstream 466671 3145417 ~ 3159914 (+)
G51394 NA non-coding upstream 39940 2631777 ~ 2633862 (+)
G51384 NA non-coding upstream 52615 2554739 ~ 2621187 (+)
G51368 NA non-coding upstream 245480 2428122 ~ 2428322 (+)
G51354 NA non-coding upstream 248519 2415700 ~ 2425283 (+)
G51272 NA non-coding upstream 272435 2401033 ~ 2401367 (+)
G51470 NA non-coding downstream 144216 2822962 ~ 2823706 (+)
G51388 NA non-coding downstream 161664 2840410 ~ 2844319 (+)
G51495 NA non-coding downstream 222728 2901474 ~ 2901723 (+)
G51496 NA non-coding downstream 223201 2901947 ~ 2902312 (+)
G51500 NA non-coding downstream 228620 2907366 ~ 2907596 (+)
G51274 NA other upstream 323316 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 772376 1897343 ~ 1919516 (+)
G51122 NA other upstream 991836 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 1235447 1429873 ~ 1435328 (+)
G50920 NA other upstream 1903569 769841 ~ 770233 (+)
G51529 NA other downstream 383287 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 524026 3202207 ~ 3208984 (+)
G53388 NA other downstream 2843496 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 3181556 5931718 ~ 5943899 (+)
G53651 NA other downstream 3566818 6245564 ~ 6248392 (+)

Expression


Co-expression Network