CI01000009_03313112_03329470 (MED14)


Basic Information

Item Value
gene id CI01000009_03313112_03329470
gene name MED14
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3313112 ~ 3329510 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_03313112_03329470.mRNA
ATGGCTCCAGTTCAGATCGGTTCGGACGGGCAGCTGGTCCCCGCCGGGGGTCCGACTTCAGCCCCGCAGCCTCCTCCGGGAGCCCCGGCCACTCAAGGAGTTCGACTGAGCCTCCTGATCGAGTTTCTGTTGCAGCGAACCTACCATGAGATCACTCTGCTGGCTGAGCTACTTCCACGAAAAACAGACATGGAAAGGAAAATTGAAATTGTTCAGTTTGCCAGTCGGACACGGCAGCTCTTTGTACGTCTGCTTGCTCTTGTGAAATGGGCAAGTAATGCCGGGAAGGTGGAGAAATGCGCGATGATCTCCTCATTTCTGGATCAACAAGCATATTTATTTGTTGACACGGCTGACCGGCTGGCATCACTGGCCAGGGATGCCTTGGTACATGCACGTTTGCCTAGTTTTGCCATCCCTTTTGCCATTGATGTACTAACCACAGGGTCTTATCCACGTCTGCCCACATGCATCCGAGACAAAATTATTCCTCCTGACCCTATAACCAAAGCAGAGAAGCAGACCACACTAAATCAGCTGAATCAAATCCTGCGACACCGACTAGTCACCACCGACTTGCCCCCACAGCTGGCCAACTTAACTGTGGTGTGTTTTGTTCTTACAATACATGATCTTACTTGTTTCTATGAACTCTTTGCATGTCAAGCCAACGGGCGAGTGAAGTTTCGTGTTGAGGGAGAATTCGAAGCCACACTGACAGTGATGGGGGATGATCCTGATATCCCTTGGAGACTTCTTAAACTAGAGATTCTAGTTGAAGACAAGGAAACTGGAGACTCGTTTTGCCTATCACTACAGCTGGAGGTGTTGCATTCCCAGACTCTGATGTTGATCAGAGAGCGATGGGGTGATCTAGTGCAGGTGGAGCGCTATGTCCCAGCCAAGTGCCTCACATTGTCTGTCTGGAATCAACAGGTCCTGGGTAGAAAGACCGGAACGGCACCTGTGCACAAAGTCACCATTAAAATTGATGAGATGGATGGTTCCAAGCCATTACAGATCTCCCATGAGCCTCCACTGCCTGCCTGTGATTCCAGATTAATGGAAAGAGCCATGAAGATCGATCATCTCTCAGTGGAAAAGCTTTTGATCGATAGTGTGCATGCCCGCTCGCATCAGAAACTGCAAGAACTCAAAGCCATCCTGAAAAGTAGCAACCCTAGTGATAACTCCTTCATAGAGACTGCACTGCCCACACTAGTCATACCAATACTGGAGCCCTGCGGGCGATCTGAGTGCCTGCACATATTTGTCGATTTGCATTCCGGAATGTTTCAGCCAATGCTCTACGGAGTTGATCAGTCCATGTTGGACGACATTGAAAAGAGTATCAACGATGACATGAAGCGCATCGTCACTTGGTTACAGCAGCTAAATCAGATGGAGAGTGAGGATGGGCTGCCTGCTGCTCAGCTGCTGCAGCAGTTTAAGCCCAACCTTGAGGAGCTTGTGCAGGACATTTCATCTGGTCGAGTGGTTCGTCCTGGATCCAAGAGGAAGTTGTCTGGAGAGCAAAGTGCCATTGAACCGAAGAAACCCAAGAGGTCAGGAGAGATGTGTGCCTTCAATAAAGAGCTTGCCCACCTGGTGGCTATGTGTGACACCAACATGCCCCTCATCGGATTACGCTGTGAGTTGTCGAATATGGAGATTCCTCATCAGGGAGTTCAGGTTGAAGGAGACGGTTGTAGTCATGCCATACGTATTCTGAAAGTTCCACCTTGTAAGGGAGTGAGTGAGGAAACGAGAAAATCTCTTGAGCGTTCCCTGCTGGACTGCACGTTCAGACTACAGGGCCGCAATAATCGCACCTGGGTGGCAGAATTGATTTTCTCCAGCTGCCCACTAAACAGCACATCCAACAAAGAGCAAGCTTCCACGCGGCATGTATACCTGACGTATGAGAATCCCCTATCGGAGCCAGTAGGTGGCAGGAAAGTAGTGGAGATGTTCTTGAACGATTGGAACAGTGTTAGTCAGCTTTACGAATGTGTGTTGGAGTTCTCGCGCTCTTTACCTGAAATGCCCTCCTATTTGAGCCTTTTCTCAGAGATACGACTGTATAATTATCGAAAACTGGTTCTATGTTATGGCAGTACCAAAGGCAGCTCGGTGACAATACAGTGGAATTCAGTAACCCAGCGTTTCCATCTGGCCCTGGGAACTGTGGGGCCCAATTCAGGCTGTAGCAACTGTCACAACATAATTCTCCACCAACTTCAAGAGATGTTCAACAAGACACCCAATGTTGTACAACTTCTACAGGTCCTCTCAGACACACTAGCTCCTCTAAATGCCATCAACAAGCTACCCACTGTGCCTATGCTGGGCCTCACCCAAAGGACCAATACGGCGTACCAGTGCTTCTCCATCCTGCCCCAGTCACCCACTCACATCCGCCTGGCCTTCCGCAACATGTACTGCATCGACATCTACTGCCGTAGCAGAGGTGTGGTGGCTATCCGTGACGGGGCCTACAGTCTGTTTGACAACACCAAGATAGTTGAAGGTTTCTACCCCGCCCCTGGACTGAAGACGTTCTTGAACATGTTTGTGGATAGTAACCAGGACGCCCGTAGACGCTCTGTCAATGAGGATGACAACCCTCCGTCCCCAATAAGCATGGATGACACCTTCATGCCCCATACCCAGGCGCAGCCTCCGGGTAGAGGGGTGTATCCACCCCTCACATCGCCCCCCAACCCGTACCATGTGCCTCCCTCACCGTCCATGATAACAACGCAGTCTCCAGGGAACATCCACGCAGCCAATTCCCCTAGTGGAGCTCTGCGGGCTCCTTCTCCCTTTGGGCCCACCCCTTCTCCCTCCTCTCTGGGAATTTCTATGGGGCAGACCTCCAACTTTGCCAGCCCACATGGTTCACAGGCAATGCCTCCTCCTCGTAAACTGCCACAACGGTCCTGGGCCGCTTCTATCCCCACCATCCTCACCCACAGCAAACTACATGTGCTGCTTCTGCCTTCACCCATGCCGTGCCCGGTGCCAGGGCTAGCGGGCAGCTACCTGTGCTCACCTCTGGAGCGCTTCCTGGGCTCTGTCATCATGAGGCGACACCTACAAAGAATCATCCAGTTAGAACCCAACCTCACTATTGTGAACTCCAATGAACCGGGTGTCATCATGTTTAAAACGGATGTGCTTAAATGTAGAGTGGCTCTCAACCCCAAATCCTACCAGACTCTGCAGCTAAAAGTCACACCAGAAAACACTGGACCCTGGTCACAGGAGGAGCTGCAAGTCCTGGAAAAGTTCTTTGAGACCAGGGTTGCAGGACCACCCTTTAAATACAACACACTAAATGCCTTCACAAAGCTGTTGGGAGCTCCTACCAACATACTCAGAGACTGTGTTCGCATCATGAAATTGGAGTTGTTCCCAGACCAAGCGGCCCAGCTGAATTGGAATGTCCAGTTTTGTCTGACCATCCCACCCAGCGCTCCTCCCATTGCCCCACCAGGAACCATTGCTGTGGTGCTGAAGACAAAGATGCTGTTCTTTCTCCAGCTGACCCAAAGGTTACAGGTACCCCAGGAGCCCATCAGCATCATAGTGCCCATTGTGTACGACATGGCTACTGGACTGACCCAACAGGCCGATATCCCCCGCCAGCACAGCTCCTCAGGAGCCGCGGCCCTGATGGTCAGCTCCATCCTCAGAAGGTTCAATGAGCATCATCCACCACGATCAGGGGAGTGCACAATATTTGCAGCGGTTCATGAGCTTATGGCTAATCTCACGCTGAACCCTGGTGGACGGCCATAACTTGGTGTCTCTTGGGAAACTTCTCCAGACTTGTCAGTTA

Function

symbol description
med14 Predicted to enable transcription coregulator activity. Acts upstream of or within animal organ development; blood vessel morphogenesis; and stem cell population maintenance. Predicted to be located in nucleus. Predicted to be part of core mediator complex and mediator complex. Is expressed in head and trunk. Orthologous to human MED14 (mediator complex subunit 14).

GO:

id name namespace
GO:0019827 stem cell population maintenance biological_process

KEGG:

id description
K15156 MED14, RGR1; mediator of RNA polymerase II transcription subunit 14

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_03313112_03329470.mRNA True 3844 mRNA 0.51 27 3313112 3329510

Neighbor

gene id symbol gene type direction distance location
CI01000009_03301176_03305406 LAMP1 coding upstream 7517 3301176 ~ 3305595 (+)
CI01000009_03276572_03283625 POU2F1B, POU2F1 coding upstream 29106 3276572 ~ 3284006 (+)
CI01000009_03211734_03220047 NXPE3 coding upstream 91805 3211734 ~ 3222297 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S coding upstream 105684 3202207 ~ 3208984 (+)
CI01000009_03164135_03169470 GPR161 coding upstream 142972 3162318 ~ 3170140 (+)
CI01000009_03330968_03333405 NA coding downstream 1075 3330585 ~ 3333453 (+)
CI01000009_03335503_03355421 NA coding downstream 5993 3335503 ~ 3355426 (+)
CI01000009_03466999_03473248 SHOX, MOG-12 coding downstream 137343 3466853 ~ 3473414 (+)
CI01000009_03650884_03661357 TFDP1A, TFDP1 coding downstream 321374 3650884 ~ 3661357 (+)
CI01000009_03680266_03685634 NA coding downstream 350756 3680266 ~ 3685655 (+)
G51639 NA non-coding upstream 1643 3310954 ~ 3311469 (+)
G51638 NA non-coding upstream 3575 3309078 ~ 3309537 (+)
G51637 NA non-coding upstream 4353 3308526 ~ 3308759 (+)
G51569 NA non-coding upstream 22302 3287328 ~ 3290810 (+)
G51585 NA non-coding upstream 50153 3262336 ~ 3262959 (+)
G51659 NA non-coding downstream 98056 3427566 ~ 3427773 (+)
G51673 NA non-coding downstream 265794 3595304 ~ 3599012 (+)
G51734 NA non-coding downstream 280725 3610235 ~ 3610474 (+)
G51735 NA non-coding downstream 280970 3610480 ~ 3610852 (+)
G51736 NA non-coding downstream 281568 3611078 ~ 3611277 (+)
G51529 NA other upstream 250525 3062033 ~ 3062587 (+)
G51274 NA other upstream 962626 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 1411686 1897343 ~ 1919516 (+)
G51122 NA other upstream 1631146 1680146 ~ 1681966 (+)
G53388 NA other downstream 2192732 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 2530792 5931718 ~ 5943899 (+)
G53651 NA other downstream 2916054 6245564 ~ 6248392 (+)
G56100 NA other downstream 5799790 9129300 ~ 9130286 (+)
CI01000009_09853929_09854476 SAP18 other downstream 6523849 9853929 ~ 9856587 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00014721 med14,LOC106581951 coding CM030128.1 CM030128.1 28407217 ~ 28441529 (+)