G73643 (LOC108428768)


Basic Information

Item Value
gene id G73643
gene name LOC108428768
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14819476 ~ 14819763 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU99308
acattttgtTACCTCTCTCTCCTGTCTGGCTCTTTATTAACTGCAGGGCAGCAGAGATCTGGCTGGTGTCTGTGACGTCCAGTTGGAGGACAGTAAGTTGTGAAGATGAAAGTCTCCTGAGCTCCTGTGCTCCTGGTCCACTTTCCTTCAGCACCCCAGCATATACCTTTATTCCAGCACTGTCCAGAATCTTAGCAAGACTGTGGCCAAACCCTGAATCACAACCTGTTCCACACATGGGCAACATAATGCTAAAATTAGGATTCTCACCACATGCAGTGACATAAA

Function

NR:

description
PREDICTED: estradiol 17-beta-dehydrogenase 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99308 True 288 lncRNA 0.47 1 14819476 14819763

Neighbor

gene id symbol gene type direction distance location
prkar2b prkar2b,LOC108275286,LOC107732287,LOC107551419,LOC107676465 coding downstream 86223 14718554 ~ 14733253 (-)
LOC111193055 NA coding downstream 129369 14687689 ~ 14690107 (-)
gpr22 gpr22,gpr22b,LOC108428781,LOC107754326,LOC107676451,LOC107561157,LOC107701065 coding downstream 170225 14640001 ~ 14649251 (-)
LOC103028140 golt1bb,LOC107551388,LOC107676462,LOC108428784,LOC107754325,LOC107701063 coding downstream 200088 14614391 ~ 14619388 (-)
LOC103041151 NA coding downstream 240958 14574795 ~ 14578518 (-)
mphosph6 mphosph6 coding upstream 3455 14823218 ~ 14826889 (-)
snx20 snx20 coding upstream 7641 14827404 ~ 14831477 (-)
LOC103033621 NA coding upstream 29819 14849582 ~ 14857596 (-)
rbl2 rbl2 coding upstream 49169 14868932 ~ 14889755 (-)
irx3 LOC103035229,LOC108428748 coding upstream 144735 14964498 ~ 14967301 (-)
G73642 NA non-coding downstream 664 14818502 ~ 14818812 (-)
G73639 NA non-coding downstream 13974 14804231 ~ 14805502 (-)
G73605 NA non-coding downstream 18843 14797355 ~ 14800633 (-)
G73622 NA non-coding downstream 62228 14756899 ~ 14757248 (-)
G73617 dus2,LOC107555686 non-coding downstream 70818 14745170 ~ 14748658 (-)
G73644 NA non-coding upstream 467 14820230 ~ 14820476 (-)
G73671 NA non-coding upstream 71709 14891472 ~ 14893864 (-)
G73674 NA non-coding upstream 80905 14900668 ~ 14902293 (-)
G73675 NA non-coding upstream 82625 14902388 ~ 14904820 (-)
G73679 rpgrip1l non-coding upstream 89344 14909107 ~ 14910680 (-)
hbp1 hbp1,LOC107732286,LOC107701066 other downstream 22193 14709058 ~ 14797283 (-)
LOC103025073 dynlrb2,LOC103025073,LOC106573385 other downstream 273940 14542196 ~ 14545536 (-)
G73172 NA other downstream 2198120 12610834 ~ 12621356 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107742043,LOC107662464 other downstream 2254498 12548690 ~ 12564978 (-)
LOC111193053 tnni2a.2,LOC108428758,LOC108275295,LOC103035007,LOC107549280,LOC107595232 other downstream 2767987 12048626 ~ 12051489 (-)
LOC103037068 cpne8,LOC108274474,LOC107679956,LOC107752477,LOC107723993,LOC105026415,LOC106561599,LOC105028206 other upstream 304051 15123814 ~ 15214284 (-)
LOC103040324 NA other upstream 561566 15381329 ~ 15414613 (-)
LOC103046265 pkp3 other upstream 938540 15758303 ~ 15780678 (-)
LOC103041134 rps27l,zgc:136826,LOC107752326,LOC107598918,LOC101156845 other upstream 1647326 16467089 ~ 16470323 (-)
nrg4 NA other upstream 3057263 17877026 ~ 17885395 (-)

Expression


Co-expression Network