CI01000009_10268535_10269640


Basic Information

Item Value
gene id CI01000009_10268535_10269640
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 10268535 ~ 10269784 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_10268535_10269640.mRNA
ATGACCATTATTACAATCTACAAAAACTGGTCACAGTTTTTTGGTTACATCTGCATAGCTGTTGGTTTCTTTGGATGGTGGCTGATATCAAACACCAAGGTTGGGATTTATTGTGTCAGATGTTCTTGTCAGTGTTTGAAGGACTGTTGCTGCAAGAGCTGTAACAACTCCCCCACCTGTCAGAGTTTGAAGGACTGCTGCTGCAAAATTAAACCATACTACGAGAGGCGGTATGAGGAGCTTGTGTCTGTGGAAACGGATAAACACCTGGACAAAAAATTGCAAAAAATAGCCAAAAAGAAAGCAAAAAGGATATGTTCAAATTACATTAATGTTATTGAAAATAGTGAGTCTAACACAACCACACGAATGTCTGAAGAGGCTAGGATGGCTTTGTCTGAAATATCTCGCCCAAATTTTTATAGGCCTACATCAGATCTTTCTGAAAATGTGAACAACGAGGGCACGTCTGTTTGATATAATTTGTCGCATTTGTAACAATAATTCATCTAGAGGATAGGCCTATGTGTATTTATTTATTTTTGAAAAGAAAGTCATTAAAAAAATCAAAATTTGACATTGTTTTCTGAATTAAATTCTAAATCATCCACTACAACAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_10268535_10269640.mRNA True 621 mRNA 0.36 2 10268535 10269784

Neighbor

gene id symbol gene type direction distance location
CI01000009_10103558_10119209 GDAP2 coding upstream 149315 10103558 ~ 10119220 (+)
CI01000009_09967529_09989449 TBX15 coding upstream 279068 9967384 ~ 9989467 (+)
CI01000009_09952526_09962840 WARS2 coding upstream 304256 9952526 ~ 9964279 (+)
CI01000009_09878612_09881564 POPDC2 coding upstream 386641 9878612 ~ 9881894 (+)
CI01000009_09866000_09866290 NA coding upstream 402141 9865723 ~ 9867040 (+)
CI01000009_10319216_10329706 PLCD4B coding downstream 49432 10319216 ~ 10329836 (+)
CI01000009_10338738_10339712 BCS1L coding downstream 68954 10338738 ~ 10339774 (+)
CI01000009_10341830_10347798 CYP27A1.2, CYP27A1.4, CYP27A7 coding downstream 72046 10341830 ~ 10348005 (+)
CI01000009_10361969_10374788 MCM3AP coding downstream 92185 10361969 ~ 10375458 (+)
CI01000009_10376105_10382009 LSS coding downstream 106321 10376105 ~ 10382284 (+)
G56392 NA non-coding upstream 8875 10258528 ~ 10259660 (+)
G56349 NA non-coding upstream 133106 10052050 ~ 10135429 (+)
G56456 NA non-coding upstream 210003 10058274 ~ 10058532 (+)
G56439 NA non-coding upstream 248192 10020106 ~ 10020343 (+)
G56417 NA non-coding upstream 351362 9916869 ~ 9917173 (+)
G56507 NA non-coding downstream 13289 10283073 ~ 10284524 (+)
G56509 NA non-coding downstream 19066 10288850 ~ 10289512 (+)
G56540 NA non-coding downstream 20675 10290459 ~ 10292559 (+)
G56393 NA non-coding downstream 33698 10303482 ~ 10304485 (+)
G56564 NA non-coding downstream 83145 10352929 ~ 10353684 (+)
CI01000009_09853929_09854476 SAP18 other upstream 411948 9853929 ~ 9856587 (+)
G56100 NA other upstream 1138249 9129300 ~ 9130286 (+)
G53651 NA other upstream 4020143 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 4335734 5931718 ~ 5943899 (+)
G53388 NA other upstream 4729481 5522242 ~ 5540638 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other downstream 1491002 11761606 ~ 11766944 (+)
G57811 NA other downstream 1664158 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 2162774 12432538 ~ 12436017 (+)
G57682 NA other downstream 2555685 12825469 ~ 12892339 (+)
G57691 NA other downstream 2636660 12906444 ~ 12918465 (+)

Expression


Co-expression Network