CI01000009_14170062_14192930


Basic Information

Item Value
gene id CI01000009_14170062_14192930
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14169221 ~ 14193332 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_14170062_14192930.mRNA
ATATAAAGGAGCTGTTTTTGTTGATGTAGTCACTAGGGATGTGCACTCCTATTTCTTCATAAAATTTACCAAATGCCAATCCCTAATATTTATATTTAATACCATTTAATACTTCTATTTCACTTCCTTTAATGTTAAGACAATTTTTTTTTCCTCTTTGGGTTGAAATTGGCTAAACAACAAAGCCTTAAAGGGATAGTTCACCCAAAAATGAAGCACAAATAAAGATCTTTTTAATGAAATCTGAGAGCTTTCTGTCCCTCCGTTGACAGCTACGCAACTGAAACTTCGTAAACTAATCCAATGAATTGAGTGGTTTAGTCCAAATTTTCTGAAGAGACACGATAGCTTTATATGATGAACAGATTGAATTTAGGCTCGTTTGCGCGCACTGTCCGTGTGCAGCCCAATTTTTGTGTCCGGGCGGACTATGCATGTACAACCGCGCATGTGCGAGTGACTTGAGAGCTTAAAAAAACCAGAGGAGAAAACTTTGATTGGCTTGCGCACTCAACTGTGTGCGAGACGGAGCATAACACAGAAAATGAAGTATACCCGGGCCTTTAAAATGACCAAACAGGTCTTTGCTGCAGTATTTTGTTTGATGGTCTCTGGATTTGGATTTGCTGTAAAGTCGCACTGTTGAGGTTTCTTGCTTTTTCTCTCCTTTTTTTGCTTTGTTCTGTGTTAATATTTGGAAAGTGTGACTCAAAGTTGTGTTAAAGCTGGTGAGTAAAGTTTTAAGAGTAGATTTATTGGACTGGAAGTATTGGCCCTTCGGTCACAGGGATGGGGGGAGGGTGGTTGGGTGCTTCTTTAGGCTGACTAATTGGGCAGCAGCATGGCCGATGGAAATGGAGGAGCGGGATGCAGGGTTTTTGTCATGGGCCTGGTGATGAAACCGAGGCTAACATGGCTGGGACATCCTGAAAGCTTCCCAGAGGGCACATCATTGCCGCCCCATCTCCTCGTCACAAAATCTGGGCGGCGCAGGACCTGCAGTGATTGGCCGACAGTGGATTCCCTGGGAGCCATTGTTCTGTTGGAGGCAGTGAGGCCATCTGCTCTTTCCTCGGTGCCTCGCTGTGTCTGTCCATCCTCCATCTCCCACCACAGAATCAGCTGCTTATGGAAACTTCATCACACGCTCCTCTGGCTTGCAGTGACGGTTGTCCAACTACTACCAGGAGTTGAGGTAAATTACACTTACAAGGCACTTCCCAATTCCCCCAGATCTCATTTGCTAGGATGTATGGGAGCTGCATGGCTGTATTCCACCCCTGGTACCTTACAGCCCAACTCAGTGCTGGAGAGAACAGTGTCTGAGGCAGCCCCGTCGCTGAGCTGGCCCAGAGACCCAGCCACATCTGGCACGGTTTCCACCACTGAAGCACTCATGCAACATAGCTGCACCATAATGCCTGTTTGCTTTGAGCTTTGTAATGTGTCCTTGAAGGACGTCTCTCTGGTGTGGCGGCCGACGGACCGCTCGTCTCTCGGTGGGAGAAATCACACGTTGAAACGCTGCACCCGCTGGGCTGCCGAGTGGACTCCCCCGATCTGCTTGCACACAGATCAATGGCGATTCGGTCTTGTGCAAAGATCTCACTGCTCCGTAATAGTAGAAATGGGCCGCCTGCTGCTGCTCTCCTGCTTTGGACGACTCTCAAGTACCCACTTCGGTGCAAAAGAGGAATGTTCTAGTGACCCTGATGAAGTGAGGGCTGCAAAAATGTTATACGTTTGCCCGGAGCATGACACATTTTGTCACCATCTTGAAGATGTCCCGAGATCTCCTGAAGTGGAATGGATTTCGTGTTGGCTGACACCCTTGAACCAAAGACTCATTGGACTATGGTGCCAAGGGGGGCTCTTTCAGAGGGGCCCTTTCTCACTAAAGACTGGAGGCCAGACAATCTCAGGGTGCCCTTTTATTCCGTATCCAAACAAACCAGATGCAGTCTTCTGCCATTTTTTTGATATTTGGCTGCTGGAGAACCAGAATGAGCATCATCCAAATAGATGGCTGATTTGGGCCTGCCGCTTCCAAAAGCAATTAAAGAGTTGGCGTAATAACAGACCCCCCTTCCCGCCTGGAAGGCTGAGGCTGTCAGATCAAATCGCAATGAATGCATAATTGCGAATTTAAATACCATTTGCAGTAGACAGCAAGCTAAAATTATCCCATTTGTCCCATGAATTTTTCCATTTATTCATTCTGTACTCAAGTATACAGCCTAGAGGTGTGGTAAAGCCTCGTCATGCATGCAGTATGGTTAAATTTGGGCTGACATCTGTGTTCGTCACTGTTCTTTCTGTGCATGGAGTTCAGTCACACCCGGACCCCTTCTGCCAATGTTCTCAGTCTTTTTGCGGTGTGTCACGCCACGGGAGCTCAAGTCCTATGCTCGCTTGATACATGTTGCTTGGCTGAGACAAAATCAAATCAACAAGATTGTTTTCCGCTTAGTTGTTGTTCGGCTGAATAATGAATTATTCGCTGTGGCTAACTCATGGAAAAGGTTGCTGCCTTTGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_14170062_14192930.mRNA True 2539 mRNA 0.47 7 14169221 14193332

Neighbor

gene id symbol gene type direction distance location
CI01000009_14095330_14128580 NA coding upstream 40639 14093645 ~ 14128582 (+)
CI01000009_14039505_14043545 RETSATL coding upstream 125612 14039209 ~ 14043609 (+)
CI01000009_14033666_14036472 RETSATL coding upstream 132749 14033559 ~ 14036472 (+)
CI01000009_14007631_14010487 NA coding upstream 158528 14007087 ~ 14010693 (+)
CI01000009_13942733_13946356 FRZB coding upstream 222816 13942521 ~ 13946405 (+)
CI01000009_14242224_14243004 NA coding downstream 48785 14242117 ~ 14243724 (+)
CI01000009_14264935_14273006 NA coding downstream 70091 14263423 ~ 14277555 (+)
CI01000009_14296451_14314340 ADARB1A, ADARB1B, ADARB1 coding downstream 103119 14296451 ~ 14314349 (+)
CI01000009_14348389_14374515 TRAF3IP1 coding downstream 155057 14348389 ~ 14375683 (+)
CI01000009_14380226_14386430 ASB1 coding downstream 186894 14380226 ~ 14386866 (+)
G58489 NA non-coding upstream 12990 14125320 ~ 14156231 (+)
G58467 NA non-coding upstream 71518 14097491 ~ 14097703 (+)
G58421 NA non-coding upstream 117817 14050977 ~ 14051404 (+)
G58384 NA non-coding upstream 150748 14011905 ~ 14018473 (+)
G58388 NA non-coding upstream 165139 13996825 ~ 14004082 (+)
G58452 NA non-coding downstream 5306 14198638 ~ 14201846 (+)
G58456 NA non-coding downstream 111608 14304940 ~ 14399351 (+)
G58447 NA non-coding downstream 200482 14393814 ~ 14402390 (+)
G58454 NA non-coding downstream 209317 14402649 ~ 14403582 (+)
G58382 NA other upstream 129320 14039757 ~ 14039901 (+)
G58028 NA other upstream 1025613 13140378 ~ 13143608 (+)
G57701 NA other upstream 1146083 13006643 ~ 13023138 (+)
G57691 NA other upstream 1250756 12906444 ~ 12918465 (+)
G57682 NA other upstream 1276882 12825469 ~ 12892339 (+)
G58455 NA other downstream 53363 14246695 ~ 14258526 (+)
G58558 NA other downstream 303604 14496936 ~ 14501514 (+)
G58649 NA other downstream 456392 14649724 ~ 14652022 (+)
G58711 NA other downstream 573327 14766659 ~ 14773773 (+)
CI01000009_14857765_14859526 NA other downstream 625887 14857713 ~ 14859636 (+)

Expression


Co-expression Network