CI01000009_15708273_15712002 (METTL5)


Basic Information

Item Value
gene id CI01000009_15708273_15712002
gene name METTL5
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15706460 ~ 15712005 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_15708273_15712002.mRNA
GTATAAAAATGGCAATTACATGAAATATCAATGGACCCTATATGGCTGTAGCACTCACTGGCTGCATAGGCTGAAATGTATAAACCAATGTTAACAAACTTAACAAAACTTAAGTTTTAAATTTTAAATCTGGGTGTCCTGTAAAGAGCATATTCAGGGCTTTTCAGAGATACCAAATGTTTGGAGGTTTGACTATGACAACAACTGTCACAGACACGCCAGGCTCCACCATCAGCCAATCACAACGCACCCTGTCACCAGAGTACTGATCACCGGCACCTGCACCTCATGAGCACCTCATCACCCTCAGTATAAAGAACACTCACACACATCACTCTATGTCCGGTCTCGTTTGCATCTACACTTACCTGTATGCTTACCTTAAGGACTCCAAGCGATCTACTTACCTGTCTCCAGCGTCTCATGTTCTCCTCGTGTGATTCTCCGTCAGTGTGTGAGTGTTCTCCGTTCTCCGTTCTCCGTGTCAAGATTCTCCAGCGTCACTCAAGTTCTCCACAACTGCAACCAACATAAGGACTGTATCACCATTCAGCACTCCATTCATCGTCACTGCTTAAGTTATATCCACTTTCACTGCTGTTCCACTCTACTGGTGTCAATAAACTACCTTGTTTGCGAATTCCTGTCTGCGACCCTTCTGTATTGTAACAACAACTTCTCCTTGGTCTTTATTTTTTATACATGTCCACTGTAGTGGACTCAAGAGGCCCGTTTGAGAAAGGAGGTTAAGTAAAATCTCTGAGTATGTTAAAGGGTTAATTCACCTAAAAATGAAAATTCTGTCATTAATTACTCTCATGCCGTTCCACATCTTCGTGGCAAATTAAGATATTTCAATCTATTATTTATCAATAATAAACTTAATGAAACACATTTTAAAATTATACATATAATTTATCCAACAAACCAGTTCCTAAAAAGATATAAAACTGAACTTTCTGATCTTTTTTTAATGTACTGTATGTATTATTTTGGATTGATGTGAAATATTTATTTAAGTGGCATTAAAATTAACACAGAGAAAAAAGATGTTATTTTTTATTATGACAAAAAATATATACATAGACAAGAGTCACATTTTTTTATGTTAAATCCTATAATATTACTTGGTAAGTTTCACATACACAAATGAATGAAAGGATACCCAATATCACCCATTTCAAGGCTTAAGATTTACTTTGAAACATTACAAGGACTTTCAATCCACAAAACAATCAAAACTATGGACATTTATAAAGAAATAAATTCCTCTTTTTATTTTTTATCATACATGTATACCCTTTTCTGTTATTTTTCTTCTTCCTCCTTAATATGCGAATATTTTTCTTTAATATCTTTGATATGAATGTTATCTTTAACGTTCATCATATAAAATACTTGATGTTAAAAATGTTATTAATGTTTTATGATGCTATGGAAATATTTGTATCATTCAAAATGTTACATCATGTATGTTTTGTGCCGCATGGTAGTAATCATCCAGCAGATGGCGATAATATGCTCGGCCGGCAAGATGAGCTTGCAGAAGAAGAAGAAAAGAAAAACACACATGTAAGAAGAGCGCTATATGTGTTCATATGCGATCCACTGTGTGAAATCTCCACTTGAGGACAATCACCTTATATTAGTAGGAGACATCGTATGATCGCTGTGACACATCAGTCACGACATCATGATCGTTAGGCGCTTCAGTTAAGAGAGTCGGTCAACCTTCCTCATCCGATTAACATTCGCATTAAATATATCAATACAGGCTGATATGAGCTGGATTAACTGATCATCTGATGTAAATATGAAGCTCAAAGAGCTGGAGAGCTGCCTTCAGCAGGTGGATGGATTTGAGGAGCCCAAAATACTCCTGGAGCAGTACCCCACTAGTCCTCATATAGCGGGCTGTATGTTGTACACCATACACAACACATTTGATGACATACAGAATAAACTAGTTGCAGACCTGGGCTGTGGATGTGGAGTGCTGTCTATAGGAGCTGCTGTCCTTGATGCTGGACTGTGTGTCGGATTTGACATCGACGAAGACGCCTTGGATATATTTAAAGGAAATGTTGAGGAATTTGAATTGTCAAACATTGATGTGGTCCAGTGTGATGTGTGCTCTATCGGATCCTCTTACGTCAAGAAGTTTGACACGGTCATCATGAACCCTCCATTTGGCACGAAGCACAACCAGG
>TU68607
AGATGAGCTTGCAGAAGAAGAAGAAAAGAAAAACACACATGTAAGAAGAGCGCTATATGTGTTCATATGCGATCCACTGTGTGAAATCTCCACTTGAGGACAATCACCTTATATTAGTAGGAGACATCGTATGATCGCTGTGACACATCAGTCACGACATCATGATCGTTAGGCGCTTCAGTTAAGAGAGTCGGTCAACCTTCCTCATCCGATTAACATTCGCATTAAATATATCAATACAGGCTGATATGAGCTGGATTAACTGATCATCTGATGTAAATATGAAGCTCAAAGAGCTGGAGAGCTGCCTTCAGCAGGTGGATGGATTTGAGGAGCCCAAAATACTCCTGGAGCAGTACCCCACTAGTCCTCATATAGCGGGCTGTATGTTGTACACCATACACAACACATTTGATGACATACAGAATAAACTAGTTGCAGACCTGGGCTGTGGATGTGGAGTGCTGTCTATAGGAGCTGCTGTCCTTGATGCTGGACTGTGTGTCGGATTTGACATCGACGAAGACGCCTTGGATATATTTAAAGGAAATGTTGAGGAATTTGAATTGTCAAACATTGATGTGGTCCAGTGTGATGTGTGCTCTATCGGATCCTCTTACGTCAAGAAGTTTGACACGGTCATCATGAACCCTCCATTTGGCACGAAGCACAACCAGGGTA

Function

symbol description
mettl5 Predicted to enable S-adenosyl-L-methionine binding activity and rRNA (adenine-N6-)-methyltransferase activity. Predicted to be involved in positive regulation of translation; rRNA methylation; and stem cell differentiation. Predicted to act upstream of or within methylation. Predicted to be located in nucleus; postsynapse; and presynapse. Used to study autosomal recessive intellectual developmental disorder-72. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder-72. Orthologous to human METTL5 (methyltransferase 5, N6-adenosine).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_15708273_15712002.mRNA False 2210 mRNA 0.38 3 15706460 15712002
TU68607 True 681 TUCP 0.44 3 15707992 15712005

Neighbor

gene id symbol gene type direction distance location
CI01000009_15680573_15681601 NA coding upstream 24484 15680573 ~ 15681976 (+)
CI01000009_15667251_15668333 NA coding upstream 37010 15667251 ~ 15669450 (+)
CI01000009_15637754_15643935 NA coding upstream 62525 15637650 ~ 15643935 (+)
CI01000009_15625341_15626360 GPBAR1 coding upstream 80057 15625159 ~ 15626403 (+)
CI01000009_15610515_15613753 NA coding upstream 92707 15610032 ~ 15613753 (+)
CI01000009_15738136_15745816 CCDC173 coding downstream 26070 15738072 ~ 15745866 (+)
CI01000009_15770057_15782295 FASTKD1 coding downstream 58055 15770057 ~ 15783049 (+)
CI01000009_15872202_15973125 LRP2, LRP2A coding downstream 160200 15872202 ~ 15973231 (+)
CI01000009_15992272_16002225 ABCB11, ABCB11A coding downstream 280270 15992272 ~ 16002225 (+)
G60286 NA non-coding upstream 8313 15697779 ~ 15698147 (+)
G60280 NA non-coding upstream 11869 15677482 ~ 15694591 (+)
G60213 NA non-coding upstream 43765 15662473 ~ 15662695 (+)
G60222 NA non-coding upstream 149559 15556519 ~ 15556901 (+)
G60221 NA non-coding upstream 150627 15555606 ~ 15555833 (+)
G60293 NA non-coding downstream 36518 15748520 ~ 15749113 (+)
G60303 NA non-coding downstream 87679 15799681 ~ 15801256 (+)
G60028 NA other upstream 330291 15352047 ~ 15376169 (+)
CI01000009_14925314_14952223 NA other upstream 750665 14924621 ~ 14952571 (+)
CI01000009_14857765_14859526 NA other upstream 847816 14857713 ~ 14859636 (+)
G58711 NA other upstream 932687 14766659 ~ 14773773 (+)
G58649 NA other upstream 1054438 14649724 ~ 14652022 (+)

Expression


Co-expression Network